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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 60,222 bioRxiv papers from 267,720 authors.

Author: Ran Blekhman

Rankings

  • All-time downloads: 62,266 (rank: 190 out of 267,720)
  • Categories:
    • bioinformatics: 6,815 (rank: 545 out of 23,839)
    • cancer biology: 1,929 (rank: 961 (tie) out of 16,249)
    • genomics: 40,336 (rank: 126 out of 31,222)
    • microbiology: 6,363 (rank: 93 out of 27,341)
    • scientific communication and education: 6,013 (rank: 40 (tie) out of 2,216)
    • systems biology: 810 (rank: 2,284 (tie) out of 8,141)

Downloads per author, site-wide

Preprints

Common methods for fecal sample storage in field studies yield consistent signatures of individual identity in microbiome sequencing data

genomics more details view paper
  • Downloaded 33,614 times
  • Download rankings, all-time:
    • Site-wide: 12 out of 60,222
    • In genomics: 4 out of 4,168
  • Year to date:
    • Site-wide: 2 out of 60,222
  • Since beginning of last month:
    • Site-wide: 45,583 out of 60,222

Tracking the popularity and outcomes of all bioRxiv preprints

scientific communication and education more details view paper
  • Downloaded 6,013 times
  • Download rankings, all-time:
    • Site-wide: 278 out of 60,222
    • In scientific communication and education: 10 out of 417
  • Year to date:
    • Site-wide: 44 out of 60,222
  • Since beginning of last month:
    • Site-wide: 583 out of 60,222

Challenges and recommendations to improve the installability and archival stability of omics computational tools

bioinformatics more details view paper
  • Downloaded 4,450 times
  • Download rankings, all-time:
    • Site-wide: 489 out of 60,222
    • In bioinformatics: 101 out of 6,078
  • Year to date:
    • Site-wide: 490 out of 60,222
  • Since beginning of last month:
    • Site-wide: 1,104 out of 60,222

Gut microbiota has a widespread and modifiable effect on host gene regulation

genomics more details view paper
  • Downloaded 3,596 times
  • Download rankings, all-time:
    • Site-wide: 748 out of 60,222
    • In genomics: 197 out of 4,168
  • Year to date:
    • Site-wide: 1,036 out of 60,222
  • Since beginning of last month:
    • Site-wide: 2,344 out of 60,222

BugBase Predicts Organism Level Microbiome Phenotypes

bioinformatics more details view paper
  • Downloaded 2,365 times
  • Download rankings, all-time:
    • Site-wide: 1,597 out of 60,222
    • In bioinformatics: 317 out of 6,078
  • Year to date:
    • Site-wide: 3,556 out of 60,222
  • Since beginning of last month:
    • Site-wide: 6,430 out of 60,222

Variation in rural African gut microbiota is strongly correlated with colonization by Entamoeba and subsistence

microbiology more details view paper
  • Downloaded 1,617 times
  • Download rankings, all-time:
    • Site-wide: 3,072 out of 60,222
    • In microbiology: 86 out of 4,799
  • Year to date:
    • Site-wide: 41,410 out of 60,222
  • Since beginning of last month:
    • Site-wide: 49,170 out of 60,222

Colorectal cancer mutational profiles correlate with defined microbial communities in the tumor microenvironment

cancer biology more details view paper
  • Downloaded 1,480 times
  • Download rankings, all-time:
    • Site-wide: 3,578 out of 60,222
    • In cancer biology: 87 out of 1,975
  • Year to date:
    • Site-wide: 34,496 out of 60,222
  • Since beginning of last month:
    • Site-wide: 31,562 out of 60,222

HOMINID: A framework for identifying associations between host genetic variation and microbiome composition

genomics more details view paper
  • Downloaded 1,368 times
  • Download rankings, all-time:
    • Site-wide: 4,084 out of 60,222
    • In genomics: 754 out of 4,168
  • Year to date:
    • Site-wide: 43,798 out of 60,222
  • Since beginning of last month:
    • Site-wide: 43,733 out of 60,222

Ecological and evolutionary adaptations shape the gut microbiome of BaAka African rainforest hunter-gatherers

microbiology more details view paper
  • Downloaded 1,231 times
  • Download rankings, all-time:
    • Site-wide: 4,814 out of 60,222
    • In microbiology: 168 out of 4,799
  • Year to date:
    • Site-wide: 45,519 out of 60,222
  • Since beginning of last month:
    • Site-wide: 33,942 out of 60,222

Gut Microbiota Diversity across Ethnicities in the United States

microbiology more details view paper
  • Downloaded 1,205 times
  • Download rankings, all-time:
    • Site-wide: 4,982 out of 60,222
    • In microbiology: 172 out of 4,799
  • Year to date:
    • Site-wide: 7,707 out of 60,222
  • Since beginning of last month:
    • Site-wide: 14,699 out of 60,222

Global Genetic Cartography of Urban Metagenomes and Anti-Microbial Resistance

microbiology more details view paper
  • Downloaded 1,187 times
  • Download rankings, all-time:
    • Site-wide: 5,108 out of 60,222
    • In microbiology: 181 out of 4,799
  • Year to date:
    • Site-wide: 948 out of 60,222
  • Since beginning of last month:
    • Site-wide: 45 out of 60,222

Megaphage infect Prevotella and variants are widespread in gut microbiomes

microbiology more details view paper
  • Downloaded 1,123 times
  • Download rankings, all-time:
    • Site-wide: 5,642 out of 60,222
    • In microbiology: 210 out of 4,799
  • Year to date:
    • Site-wide: 10,459 out of 60,222
  • Since beginning of last month:
    • Site-wide: 21,351 out of 60,222

Virulence genes are a signature of the microbiome in the colorectal tumor microenvironment

genomics more details view paper
  • Downloaded 838 times
  • Download rankings, all-time:
    • Site-wide: 9,029 out of 60,222
    • In genomics: 1,373 out of 4,168
  • Year to date:
    • Site-wide: 51,534 out of 60,222
  • Since beginning of last month:
    • Site-wide: 45,943 out of 60,222

Interaction Between Host MicroRNAs and the Gut Microbiota in Colorectal Cancer

systems biology more details view paper
  • Downloaded 810 times
  • Download rankings, all-time:
    • Site-wide: 9,487 out of 60,222
    • In systems biology: 270 out of 1,707
  • Year to date:
    • Site-wide: 40,764 out of 60,222
  • Since beginning of last month:
    • Site-wide: 48,290 out of 60,222

Genetic and transcriptional analysis of human host response to healthy gut microbiome

genomics more details view paper
  • Downloaded 613 times
  • Download rankings, all-time:
    • Site-wide: 14,074 out of 60,222
    • In genomics: 1,856 out of 4,168
  • Year to date:
    • Site-wide: 52,758 out of 60,222
  • Since beginning of last month:
    • Site-wide: 37,992 out of 60,222

Distinct Microbes, Metabolites, and Ecologies Define the Microbiome in Deficient and Proficient Mismatch Repair Colorectal Cancers

cancer biology more details view paper
  • Downloaded 449 times
  • Download rankings, all-time:
    • Site-wide: 20,914 out of 60,222
    • In cancer biology: 633 out of 1,975
  • Year to date:
    • Site-wide: 33,190 out of 60,222
  • Since beginning of last month:
    • Site-wide: 36,855 out of 60,222

Interactions between the gut microbiome and host gene regulation in cystic fibrosis

genomics more details view paper
  • Downloaded 307 times
  • Download rankings, all-time:
    • Site-wide: 30,846 out of 60,222
    • In genomics: 2,979 out of 4,168
  • Year to date:
    • Site-wide: 9,575 out of 60,222
  • Since beginning of last month:
    • Site-wide: 12,204 out of 60,222

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