Author: Joshua Gould

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Preprints

Integrated analyses of single-cell atlases reveal age, gender, and smoking status associations with cell type-specific expression of mediators of SARS-CoV-2 viral entry and highlights inflammatory programs in putative target cells

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  • Site-wide: 322
  • In bioinformatics: 7
• Year to date:
  • Site-wide: 1,282
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A Next Generation Connectivity Map: L1000 Platform And The First 1,000,000 Profiles

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  • Site-wide: 867
  • In genomics: 74
• Year to date:
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A single-cell and single-nucleus RNA-seq toolbox for fresh and frozen human tumors

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  • Site-wide: 1,108
  • In genomics: 107
• Year to date:
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High-density spatial transcriptomics arrays for in situ tissue profiling

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  • Site-wide: 1,158
  • In genomics: 114
• Year to date:
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Single-nucleus and spatial transcriptomics of archival pancreatic cancer reveals multi-compartment reprogramming after neoadjuvant treatment

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  • In genomics: 446
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The GCTx format and cmap{Py, R, M} packages: resources for the optimized storage and integrated traversal of dense matrices of data and annotations

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  • Site-wide: 6,196
  • In bioinformatics: 741
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scSVA: an interactive tool for big data visualization and exploration in single-cell omics

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  • Site-wide: 9,052
  • In bioinformatics: 1,109
• Year to date:
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Cumulus: a cloud-based data analysis framework for large-scale single-cell and single-nucleus RNA-seq

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  • Site-wide: 9,219
  • In bioinformatics: 1,132
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A Library of Phosphoproteomic and Chromatin Signatures for Characterizing Cellular Responses to Drug Perturbations

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  • Site-wide: 17,964
  • In systems biology: 372
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