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Author: Pedro Beltrao

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  • All-time downloads: 184,338 (rank: 92 out of 396,037)
  • Categories:
    • bioinformatics: 1,907 (rank: 5,905 (tie) out of 33,586)
    • cell biology: 1,932 (rank: 1,980 (tie) out of 29,606)
    • evolutionary biology: 1,446 (rank: 3,075 out of 20,204)
    • genetics: 764 (rank: 15,826 (tie) out of 36,261)
    • genomics: 5,662 (rank: 3,076 (tie) out of 42,049)
    • microbiology: 1,934 (rank: 4,200 out of 45,236)
    • systems biology: 170,693 (rank: 1 out of 11,553)

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Preprints

A SARS-CoV-2-Human Protein-Protein Interaction Map Reveals Drug Targets and Potential Drug-Repurposing

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The functional landscape of the human phosphoproteome

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Phenotype prediction in an Escherichia coli strain panel

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Chromosomal rearrangements are commonly post-transcriptionally attenuated in cancer

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An Atlas of Human Kinase Regulation

systems biology more details view paper
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Global analysis of specificity determinants in eukaryotic protein kinases

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Exploring amino acid functions in a deep mutational landscape

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Evolution of protein kinase substrate recognition at the active site

evolutionary biology more details view paper
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Genomic determinants of protein abundance variation in colorectal cancer cells

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Comprehensive variant effect predictions of single nucleotide variants in model organisms

genomics more details view paper
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iProteinDB: an integrative database of Drosophila post-translational modifications

bioinformatics more details view paper
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    • In bioinformatics: 2,577 out of 8,680
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Towards a systematic map of the functional role of protein phosphorylation

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    • In systems biology: 475 out of 2,374
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Conserved phosphorylation hotspots in eukaryotic protein domain families

cell biology more details view paper
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Capturing variation impact on molecular interactions: the IMEx Consortium mutations data set

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    • In bioinformatics: 2,703 out of 8,680
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The impact of the genetic background on gene deletion phenotypes in Saccharomyces cerevisiae

genetics more details view paper
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    • In genetics: 1,156 out of 4,748
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Major role of iron uptake systems in the intrinsic extra-intestinal virulence of the genus Escherichia revealed by a genome-wide association study

microbiology more details view paper
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Global post-translational modification profiling of HIV-1-infected cells reveals mechanisms of host cellular pathway remodeling

microbiology more details view paper
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Sub-minute phosphoregulation of cell-cycle systems during Plasmodium gamete formation

microbiology more details view paper
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    • In microbiology: 1,520 out of 8,047
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Spatiotemporal proteomics uncovers cathepsin-dependent host cell death during bacterial infection

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    • In systems biology: 687 out of 2,374
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Systematic analysis of transcriptional and post-transcriptional regulation of metabolism in yeast

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Proteome-wide inference of protein kinase regulatory circuits

systems biology more details view paper
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Copy number aberrations drive kinase re-wiring leading to genetic vulnerabilities in cancer

genomics more details view paper
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    • In genomics: 2,959 out of 5,845
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Conservation and structural analysis of the Xenopus laevis phospho-proteome

evolutionary biology more details view paper
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    • In evolutionary biology: 1,926 out of 5,619
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    • Site-wide: 78,587 out of 92,738

Multi-omics characterization of interaction-mediated control of human protein abundance levels

genomics more details view paper
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    • In genomics: 3,626 out of 5,845
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Benchmarking substrate-based kinase activity inference using phosphoproteomic data

bioinformatics more details view paper
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