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Author: Jie Xu

Rankings

  • All-time downloads: 50,425 (rank: 4,742 )
  • Categories:
    • bioinformatics: 3,618 (rank: 4,693 (tie) )
    • biophysics: 1,887 (rank: 3,448 )
    • cancer biology: 2,645 (rank: 2,966 )
    • cell biology: 705 (rank: 19,301 (tie) )
    • developmental biology: 344 (rank: 18,550 (tie) )
    • epidemiology: 6,733 (rank: 2,925 )
    • evolutionary biology: 331 (rank: 22,535 (tie) )
    • genomics: 9,145 (rank: 2,673 )
    • health informatics: 2,121 (rank: 528 )
    • infectious diseases: 7,608 (rank: 8,513 (tie) )
    • microbiology: 1,432 (rank: 14,281 (tie) )
    • molecular biology: 380 (rank: 22,796 (tie) )
    • nephrology: 429 (rank: 837 (tie) )
    • neuroscience: 1,267 (rank: 25,805 (tie) )
    • pharmacology and toxicology: 67 (rank: 10,500 (tie) )
    • plant biology: 1,522 (rank: 3,298 (tie) )
    • respiratory medicine: 6,207 (rank: 163 )

Downloads per author, site-wide

Preprints

Optimizing diagnostic strategy for novel coronavirus pneumonia, a multi-center study in Eastern China

infectious diseases more details view paper
  • Downloaded 4,379 times
  • Download rankings, all-time:
    • Site-wide: 3,777
    • In infectious diseases: 830
  • Year to date:
    • Site-wide: 43,827
  • Since beginning of last month:
    • Site-wide: 47,627

An Integrative Framework For Detecting Structural Variations In Cancer Genomes

genomics more details view paper
  • Downloaded 4,283 times
  • Download rankings, all-time:
    • Site-wide: 3,890
    • In genomics: 343
  • Year to date:
    • Site-wide: 142,717
  • Since beginning of last month:
    • Site-wide: 141,975

A descriptive study of the impact of diseases control and prevention on the epidemics dynamics and clinical features of SARS-CoV-2 outbreak in Shanghai, lessons learned for metropolis epidemics prevention

infectious diseases more details view paper
  • Downloaded 3,377 times
  • Download rankings, all-time:
    • Site-wide: 5,481
    • In infectious diseases: 1,062
  • Year to date:
    • Site-wide: 27,995
  • Since beginning of last month:
    • Site-wide: 24,500

Trends and prediction in daily incidence of novel coronavirus infection in China, Hubei Province and Wuhan City: an application of Farr law

epidemiology more details view paper
  • Downloaded 3,360 times
  • Download rankings, all-time:
    • Site-wide: 5,531
    • In epidemiology: 507
  • Year to date:
    • Site-wide: 53,566
  • Since beginning of last month:
    • Site-wide: 78,291

Heart injury signs are associated with higher and earlier mortality in coronavirus disease 2019 (COVID-19)

respiratory medicine more details view paper
  • Downloaded 3,246 times
  • Download rankings, all-time:
    • Site-wide: 5,813
    • In respiratory medicine: 22
  • Year to date:
    • Site-wide: 71,430
  • Since beginning of last month:
    • Site-wide: 70,960

The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions

bioinformatics more details view paper
  • Downloaded 3,111 times
  • Download rankings, all-time:
    • Site-wide: 6,175
    • In bioinformatics: 528
  • Year to date:
    • Site-wide: 78,115
  • Since beginning of last month:
    • Site-wide: 92,697

Prevalence and clinical features of 2019 novel coronavirus disease (COVID-19) in the Fever Clinic of a teaching hospital in Beijing: a single-center, retrospective study

respiratory medicine more details view paper
  • Downloaded 3,042 times
  • Download rankings, all-time:
    • Site-wide: 6,392
    • In respiratory medicine: 26
  • Year to date:
    • Site-wide: 67,413
  • Since beginning of last month:
    • Site-wide: 84,589

Associations of stay-at-home order and face-masking recommendation with trends in daily new cases and deaths of laboratory-confirmed COVID-19 in the United States

epidemiology more details view paper
  • Downloaded 1,875 times
  • Download rankings, all-time:
    • Site-wide: 13,045
    • In epidemiology: 938
  • Year to date:
    • Site-wide: 79,576
  • Since beginning of last month:
    • Site-wide: 73,787

An Integrated Framework for Genome Analysis Reveals Numerous Previously Unrecognizable Structural Variants in Leukemia Patients' Samples

genomics more details view paper
  • Downloaded 1,806 times
  • Download rankings, all-time:
    • Site-wide: 13,742
    • In genomics: 1,268
  • Year to date:
    • Site-wide: 53,015
  • Since beginning of last month:
    • Site-wide: 40,496

An integrative ENCODE resource for cancer genomics

genomics more details view paper
  • Downloaded 1,421 times
  • Download rankings, all-time:
    • Site-wide: 19,840
    • In genomics: 1,717
  • Year to date:
    • Site-wide: 135,299
  • Since beginning of last month:
    • Site-wide: 187,458

Trends and prediction in daily incidence and deaths of COVID-19 in the United States: a search-interest based model

epidemiology more details view paper
  • Downloaded 1,342 times
  • Download rankings, all-time:
    • Site-wide: 21,670
    • In epidemiology: 1,451
  • Year to date:
    • Site-wide: 25,999
  • Since beginning of last month:
    • Site-wide: 5,820

Replication defective viral genomes exploit a cellular pro-survival mechanism to establish paramyxovirus persistence

microbiology more details view paper
  • Downloaded 1,322 times
  • Download rankings, all-time:
    • Site-wide: 22,218
    • In microbiology: 1,202
  • Year to date:
    • Site-wide: 165,217
  • Since beginning of last month:
    • Site-wide: 169,721

Federated Learning of Electronic Health Records Improves Mortality Prediction in Patients Hospitalized with COVID-19

health informatics more details view paper
  • Downloaded 1,244 times
  • Download rankings, all-time:
    • Site-wide: 24,408
    • In health informatics: 119
  • Year to date:
    • Site-wide: 22,270
  • Since beginning of last month:
    • Site-wide: 22,046

Cryo-EM structure of the receptor-activated TRPC5 ion channel at 2.9 angstrom resolution

biophysics more details view paper
  • Downloaded 1,214 times
  • Download rankings, all-time:
    • Site-wide: 25,381
    • In biophysics: 622
  • Year to date:
    • Site-wide: 129,726
  • Since beginning of last month:
    • Site-wide: 114,735

Non-coding germline GATA3 variants alter chromatin topology and contribute to pathogenesis of acute lymphoblastic leukemia

cancer biology more details view paper
  • Downloaded 1,208 times
  • Download rankings, all-time:
    • Site-wide: 25,562
    • In cancer biology: 593
  • Year to date:
    • Site-wide: 58,822
  • Since beginning of last month:
    • Site-wide: 63,419

Understanding Post-Acute Sequelae of SARS-CoV-2 Infection through Data-Driven Analysis with Longitudinal Electronic Health Records: Findings from the RECOVER Initiative

health informatics more details view paper
  • Downloaded 1,136 times
  • Download rankings, all-time:
    • Site-wide: 28,090
    • In health informatics: None
  • Year to date:
    • Site-wide: 1,368
  • Since beginning of last month:
    • Site-wide: 188

Palmitoylation is critically required for cancer intrinsic PD-1 expression and functions

cancer biology more details view paper
  • Downloaded 1,078 times
  • Download rankings, all-time:
    • Site-wide: 30,401
    • In cancer biology: 759
  • Year to date:
    • Site-wide: 66,262
  • Since beginning of last month:
    • Site-wide: 50,278

Subtype-specific epigenomic landscape and 3D genome structure in bladder cancer

genomics more details view paper
  • Downloaded 1,038 times
  • Download rankings, all-time:
    • Site-wide: 32,102
    • In genomics: 2,596
  • Year to date:
    • Site-wide: 109,855
  • Since beginning of last month:
    • Site-wide: 129,192

Metabolomics and proteomics analyses of grain yield reduction in rice under abrupt drought-flood alternation

plant biology more details view paper
  • Downloaded 844 times
  • Download rankings, all-time:
    • Site-wide: 43,682
    • In plant biology: 812
  • Year to date:
    • Site-wide: 93,871
  • Since beginning of last month:
    • Site-wide: 117,600

Increased green autofluorescence is a marker for non-invasive prediction of H2O2-induced cell death and decreases in the intracellular ATP of HaCaT cells

cell biology more details view paper
  • Downloaded 769 times
  • Download rankings, all-time:
    • Site-wide: 50,040
    • In cell biology: 2,159
  • Year to date:
    • Site-wide: 61,268
  • Since beginning of last month:
    • Site-wide: 40,726

Reduced graphene oxide membrane as supporting film for high-resolution cryo-EM

biophysics more details view paper
  • Downloaded 743 times
  • Download rankings, all-time:
    • Site-wide: 52,582
    • In biophysics: 1,715
  • Year to date:
    • Site-wide: 70,662
  • Since beginning of last month:
    • Site-wide: 49,763

Genome-wide co-localization of RNA-DNA interactions and fusion RNA pairs

genomics more details view paper
  • Downloaded 726 times
  • Download rankings, all-time:
    • Site-wide: 54,334
    • In genomics: 3,757
  • Year to date:
    • Site-wide: 166,633
  • Since beginning of last month:
    • Site-wide: 176,183

Detecting Large Indels Using Optical Map Data

bioinformatics more details view paper
  • Downloaded 563 times
  • Download rankings, all-time:
    • Site-wide: 75,882
    • In bioinformatics: 6,681
  • Year to date:
    • Site-wide: 139,450
  • Since beginning of last month:
    • Site-wide: 169,370

High-Throughput Clinical Trial Emulation with Real World Data and Machine Learning: A Case Study of Drug Repurposing for Alzheimer's Disease

health informatics more details view paper
  • Downloaded 519 times
  • Download rankings, all-time:
    • Site-wide: 83,829
    • In health informatics: 709
  • Year to date:
    • Site-wide: 4,657
  • Since beginning of last month:
    • Site-wide: 4,327

Development of a federated learning approach to predict acute kidney injury in adult hospitalized patients with COVID-19 in New York City

nephrology more details view paper
  • Downloaded 511 times
  • Download rankings, all-time:
    • Site-wide: 85,419
    • In nephrology: 75
  • Year to date:
    • Site-wide: 33,141
  • Since beginning of last month:
    • Site-wide: 44,443

Role of PARP1 in oligodendrocyte differentiation during developmental myelination and remyelination after myelin damage

neuroscience more details view paper
  • Downloaded 509 times
  • Download rankings, all-time:
    • Site-wide: 85,813
    • In neuroscience: 12,231
  • Year to date:
    • Site-wide: 97,513
  • Since beginning of last month:
    • Site-wide: 89,564

HIFα regulates developmental myelination independent of autocrine Wnt signaling

neuroscience more details view paper
  • Downloaded 492 times
  • Download rankings, all-time:
    • Site-wide: 89,183
    • In neuroscience: 12,599
  • Year to date:
    • Site-wide: 103,925
  • Since beginning of last month:
    • Site-wide: 87,591

Repurposing screen identifies Amlodipine as an inducer of PD-L1 degradation and antitumor immunity

cancer biology more details view paper
  • Downloaded 491 times
  • Download rankings, all-time:
    • Site-wide: 89,360
    • In cancer biology: 2,555
  • Year to date:
    • Site-wide: 109,777
  • Since beginning of last month:
    • Site-wide: 102,303

Machine learning enabled subgroup analysis with real-world data to inform better clinical trial design

health informatics more details view paper
  • Downloaded 479 times
  • Download rankings, all-time:
    • Site-wide: 91,929
    • In health informatics: 414
  • Year to date:
    • Site-wide: 32,990
  • Since beginning of last month:
    • Site-wide: 30,003

State heterogeneity of human mobility and COVID-19 epidemics in the European Union

epidemiology more details view paper
  • Downloaded 396 times
  • Download rankings, all-time:
    • Site-wide: 111,177
    • In epidemiology: 4,533
  • Year to date:
    • Site-wide: 128,747
  • Since beginning of last month:
    • Site-wide: 103,626

Diversity and complexity of the large surface protein family in the compacted genomes of various Pneumocystis species

molecular biology more details view paper
  • Downloaded 396 times
  • Download rankings, all-time:
    • Site-wide: 111,152
    • In molecular biology: 3,091
  • Year to date:
    • Site-wide: 168,181
  • Since beginning of last month:
    • Site-wide: 126,936

The ITPRIPL1- CD3ϵ axis: a novel immune checkpoint controlling T cells activation

immunology more details view paper
  • Downloaded 359 times
  • Download rankings, all-time:
    • Site-wide: 121,225
    • In immunology: None
  • Year to date:
    • Site-wide: 8,173
  • Since beginning of last month:
    • Site-wide: 5,200

Genomic insights into the host specific adaptation of the Pneumocystis genus and emergence of the human pathogen Pneumocystis jirovecii

evolutionary biology more details view paper
  • Downloaded 355 times
  • Download rankings, all-time:
    • Site-wide: 122,134
    • In evolutionary biology: 5,659
  • Year to date:
    • Site-wide: 128,748
  • Since beginning of last month:
    • Site-wide: 102,656

Machine Learning for Identifying Data-Driven Subphenotypes of Incident Post-Acute SARS-CoV-2 Infection Conditions with Large Scale Electronic Health Records: Findings from the RECOVER Initiative

public and global health more details view paper
  • Downloaded 321 times
  • Download rankings, all-time:
    • Site-wide: 131,906
    • In public and global health: None
  • Year to date:
    • Site-wide: 9,666
  • Since beginning of last month:
    • Site-wide: 1,202

Class II LBD genes ZmLBD5 and ZmLBD33 regulate gibberellin and abscisic acid biosynthesis

plant biology more details view paper
  • Downloaded 302 times
  • Download rankings, all-time:
    • Site-wide: 137,588
    • In plant biology: 3,634
  • Year to date:
    • Site-wide: 119,025
  • Since beginning of last month:
    • Site-wide: 97,096

dynaPhenoM: Dynamic Phenotype Modeling from Longitudinal Patient Records Using Machine Learning

health informatics more details view paper
  • Downloaded 274 times
  • Download rankings, all-time:
    • Site-wide: 145,941
    • In health informatics: 746
  • Year to date:
    • Site-wide: 27,264
  • Since beginning of last month:
    • Site-wide: 58,665

Dual functions of ZmGI1 in the photoperiodic flowering pathway and salt stress responses in maize

developmental biology more details view paper
  • Downloaded 249 times
  • Download rankings, all-time:
    • Site-wide: 153,176
    • In developmental biology: 4,005
  • Year to date:
    • Site-wide: 83,710
  • Since beginning of last month:
    • Site-wide: 59,098

Lateral mechanical impedance rather than frontal, promotes cortical expansion of roots

plant biology more details view paper
  • Downloaded 235 times
  • Download rankings, all-time:
    • Site-wide: 157,167
    • In plant biology: 4,031
  • Year to date:
    • Site-wide: 189,416
  • Since beginning of last month:
    • Site-wide: 185,889

Algorithmic Fairness in Computational Medicine

health informatics more details view paper
  • Downloaded 231 times
  • Download rankings, all-time:
    • Site-wide: 158,466
    • In health informatics: 786
  • Year to date:
    • Site-wide: 15,816
  • Since beginning of last month:
    • Site-wide: None

Proteasome maturation factor UMP1 confers broad-spectrum disease resistance by modulating H2O2 accumulation in rice

plant biology more details view paper
  • Downloaded 225 times
  • Download rankings, all-time:
    • Site-wide: 160,053
    • In plant biology: 4,259
  • Year to date:
    • Site-wide: 115,124
  • Since beginning of last month:
    • Site-wide: 155,491

Nasal BCG Exposure Accelerates Dural Lymphatics Development via Macrophages' Role in Newborn Mice

neuroscience more details view paper
  • Downloaded 213 times
  • Download rankings, all-time:
    • Site-wide: 163,222
    • In neuroscience: 23,016
  • Year to date:
    • Site-wide: 136,134
  • Since beginning of last month:
    • Site-wide: 123,490

USH2A gene mutations in rabbits lead to progressive retinal degeneration and hearing loss

developmental biology more details view paper
  • Downloaded 182 times
  • Download rankings, all-time:
    • Site-wide: 171,159
    • In developmental biology: 4,384
  • Year to date:
    • Site-wide: 22,176
  • Since beginning of last month:
    • Site-wide: 43,760

Comparative genomic and pan-genomic characteristion of Staphylococcus epidermidis from different sources unveils the molecular basis and potential biomarkers of pathogenic strains

microbiology more details view paper
  • Downloaded 168 times
  • Download rankings, all-time:
    • Site-wide: 174,211
    • In microbiology: 12,887
  • Year to date:
    • Site-wide: 92,726
  • Since beginning of last month:
    • Site-wide: 59,805

Asymmetrical adaptations to increases and decreases in environmental volatility

neuroscience more details view paper
  • Downloaded 158 times
  • Download rankings, all-time:
    • Site-wide: 176,542
    • In neuroscience: 24,856
  • Year to date:
    • Site-wide: 88,632
  • Since beginning of last month:
    • Site-wide: 180,667

Protocol for Development of a Reporting Guideline for Causal and Counterfactual Prediction Models

health informatics more details view paper
  • Downloaded 143 times
  • Download rankings, all-time:
    • Site-wide: 179,351
    • In health informatics: 811
  • Year to date:
    • Site-wide: 67,926
  • Since beginning of last month:
    • Site-wide: 80,121

A novel mechanism of Euonymine inhibits in-stent restenosis through enhancing contractile phenotype of VSMCs by targeting AKT1 and p38MAPK

pharmacology and toxicology more details view paper
  • Downloaded 90 times
  • Download rankings, all-time:
    • Site-wide: 186,798
    • In pharmacology and toxicology: 1,565
  • Year to date:
    • Site-wide: 80,893
  • Since beginning of last month:
    • Site-wide: 156,031

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