Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 60,222 bioRxiv papers from 267,721 authors.

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Preprints

Observing the Cell in Its Native State: Imaging Subcellular Dynamics in Multicellular Organisms

• Downloaded 12,768 times
• Download rankings, all-time:
  • Site-wide: 67 out of 60,222
  • In cell biology: 1 out of 2,865
• Year to date:
  • Site-wide: 4,456 out of 60,222
• Since beginning of last month:
  • Site-wide: 8,155 out of 60,222

Rapid whole brain imaging of neural activity in freely behaving larval zebrafish (Danio rerio)

• Downloaded 3,209 times
• Download rankings, all-time:
  • Site-wide: 916 out of 60,222
  • In neuroscience: 122 out of 10,621
• Year to date:
  • Site-wide: 27,511 out of 60,222
• Since beginning of last month:
  • Site-wide: 37,499 out of 60,222

NextSV: a meta-caller for structural variants from low-coverage long-read sequencing data

• Downloaded 2,148 times
• Download rankings, all-time:
  • Site-wide: 1,885 out of 60,222
  • In genomics: 414 out of 4,168
• Year to date:
  • Site-wide: 20,155 out of 60,222
• Since beginning of last month:
  • Site-wide: 32,404 out of 60,222

N6-Methyladenine DNA Modification in Human Genome

• Downloaded 2,137 times
• Download rankings, all-time:
  • Site-wide: 1,906 out of 60,222
  • In genomics: 419 out of 4,168
• Year to date:
  • Site-wide: 5,935 out of 60,222
• Since beginning of last month:
  • Site-wide: 15,273 out of 60,222

A variant in TAF1 is associated with a new syndrome with severe intellectual disability and characteristic dysmorphic features

• Downloaded 2,022 times
• Download rankings, all-time:
  • Site-wide: 2,104 out of 60,222
  • In genetics: 203 out of 3,432
• Year to date:
  • Site-wide: 11,504 out of 60,222
• Since beginning of last month:
  • Site-wide: 22,006 out of 60,222

NanoMod: a computational tool to detect DNA modifications using Nanopore long-read sequencing data

• Downloaded 1,952 times
• Download rankings, all-time:
  • Site-wide: 2,247 out of 60,222
  • In bioinformatics: 461 out of 6,078
• Year to date:
  • Site-wide: 4,120 out of 60,222
• Since beginning of last month:
  • Site-wide: 22,339 out of 60,222

Deconvolution of Transcriptional Networks Identifies TCF4 as a Master Regulator in Schizophrenia

• Downloaded 1,185 times
• Download rankings, all-time:
  • Site-wide: 5,129 out of 60,222
  • In neuroscience: 795 out of 10,621
• Year to date:
  • Site-wide: 7,871 out of 60,222
• Since beginning of last month:
  • Site-wide: 5,288 out of 60,222

Reduced Default Mode Network Functional Connectivity in Patients with Recurrent Major Depressive Disorder

• Downloaded 1,122 times
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  • Site-wide: 5,665 out of 60,222
  • In neuroscience: 890 out of 10,621
• Year to date:
  • Site-wide: 3,995 out of 60,222
• Since beginning of last month:
  • Site-wide: 21,323 out of 60,222

iCAGES: integrated CAncer GEnome Score for comprehensively prioritizing cancer driver genes in personal genomes

• Downloaded 1,021 times
• Download rankings, all-time:
  • Site-wide: 6,608 out of 60,222
  • In genomics: 1,088 out of 4,168
• Year to date:
  • Site-wide: 57,931 out of 60,222
• Since beginning of last month:
  • Site-wide: 48,596 out of 60,222

Assessing the measurement transfer function of single-cell RNA sequencing

• Downloaded 996 times
• Download rankings, all-time:
  • Site-wide: 6,873 out of 60,222
  • In genomics: 1,119 out of 4,168
• Year to date:
  • Site-wide: 49,530 out of 60,222
• Since beginning of last month:
  • Site-wide: 54,193 out of 60,222

Isolation and characterization of extracellular vesicles from Caenorhabditis elegans for multi-omic analysis.

• Downloaded 945 times
• Download rankings, all-time:
  • Site-wide: 7,429 out of 60,222
  • In cell biology: 246 out of 2,865
• Year to date:
  • Site-wide: 2,292 out of 60,222
• Since beginning of last month:
  • Site-wide: 4,430 out of 60,222

Single-molecule optical mapping enables quantitative measurement of D4Z4 repeats in facioscapulohumeral muscular dystrophy (FSHD)

• Downloaded 936 times
• Download rankings, all-time:
  • Site-wide: 7,557 out of 60,222
  • In genomics: 1,191 out of 4,168
• Year to date:
  • Site-wide: 6,895 out of 60,222
• Since beginning of last month:
  • Site-wide: 8,207 out of 60,222

HadoopCNV: A Dynamic Programming Imputation Algorithm To Detect Copy Number Variants From Sequencing Data

• Downloaded 921 times
• Download rankings, all-time:
  • Site-wide: 7,766 out of 60,222
  • In bioinformatics: 1,387 out of 6,078
• Year to date:
  • Site-wide: 29,299 out of 60,222
• Since beginning of last month:
  • Site-wide: 32,912 out of 60,222

VirTect: a computational method for detecting virus species from RNA-Seq and its application in head and neck squamous cell carcinoma

• Downloaded 907 times
• Download rankings, all-time:
  • Site-wide: 7,948 out of 60,222
  • In bioinformatics: 1,413 out of 6,078
• Year to date:
  • Site-wide: 4,340 out of 60,222
• Since beginning of last month:
  • Site-wide: 6,456 out of 60,222

Localization of balanced chromosome translocation breakpoints by long-read sequencing on the Oxford Nanopore platform

• Downloaded 896 times
• Download rankings, all-time:
  • Site-wide: 8,105 out of 60,222
  • In genetics: 619 out of 3,432
• Year to date:
  • Site-wide: 3,318 out of 60,222
• Since beginning of last month:
  • Site-wide: 4,365 out of 60,222

LinkedSV: Detection of mosaic structural variants from linked-read exome and genome sequencing data

• Downloaded 865 times
• Download rankings, all-time:
  • Site-wide: 8,557 out of 60,222
  • In bioinformatics: 1,508 out of 6,078
• Year to date:
  • Site-wide: 3,341 out of 60,222
• Since beginning of last month:
  • Site-wide: 4,098 out of 60,222

TNER: A Novel Background Error Suppression Method for Mutation Detection in Circulating Tumor DNA

• Downloaded 838 times
• Download rankings, all-time:
  • Site-wide: 9,023 out of 60,222
  • In bioinformatics: 1,591 out of 6,078
• Year to date:
  • Site-wide: 16,862 out of 60,222
• Since beginning of last month:
  • Site-wide: 35,567 out of 60,222

Detection of Base Analogs Incorporated During DNA Replication by Nanopore Sequencing

• Downloaded 743 times
• Download rankings, all-time:
  • Site-wide: 10,740 out of 60,222
  • In genomics: 1,551 out of 4,168
• Year to date:
  • Site-wide: 2,172 out of 60,222
• Since beginning of last month:
  • Site-wide: 5,528 out of 60,222

Ligation-anchored PCR unveils immune repertoire of TCR-beta from whole blood

• Downloaded 530 times
• Download rankings, all-time:
  • Site-wide: 17,138 out of 60,222
  • In genomics: 2,113 out of 4,168
• Year to date:
  • Site-wide: 51,095 out of 60,222
• Since beginning of last month:
  • Site-wide: 48,373 out of 60,222

Long-read sequencing identified a causal structural variant in an exome-negative case and enabled preimplantation genetic diagnosis

• Downloaded 524 times
• Download rankings, all-time:
  • Site-wide: 17,371 out of 60,222
  • In genetics: 1,192 out of 3,432
• Year to date:
  • Site-wide: 21,918 out of 60,222
• Since beginning of last month:
  • Site-wide: 19,664 out of 60,222

UBE2G1 Governs the Destruction of Cereblon Neomorphic Substrates

• Downloaded 484 times
• Download rankings, all-time:
  • Site-wide: 19,139 out of 60,222
  • In molecular biology: 556 out of 1,850
• Year to date:
  • Site-wide: 13,948 out of 60,222
• Since beginning of last month:
  • Site-wide: 13,447 out of 60,222

Oligomerization of the NLR immune receptor RPP7 triggered by the atypical resistance protein RPW8/HR as a ligand

• Downloaded 454 times
• Download rankings, all-time:
  • Site-wide: 20,655 out of 60,222
  • In plant biology: 543 out of 1,675
• Year to date:
  • Site-wide: 5,034 out of 60,222
• Since beginning of last month:
  • Site-wide: 4,266 out of 60,222

Gene expression in patient-derived neural progenitors provide insights into neurodevelopmental aspects of schizophrenia

• Downloaded 418 times
• Download rankings, all-time:
  • Site-wide: 22,631 out of 60,222
  • In genetics: 1,510 out of 3,432
• Year to date:
  • Site-wide: 35,861 out of 60,222
• Since beginning of last month:
  • Site-wide: 42,349 out of 60,222

Detecting differential alternative splicing events in scRNA-seq with or without UMIs

• Downloaded 346 times
• Download rankings, all-time:
  • Site-wide: 27,605 out of 60,222
  • In bioinformatics: 3,711 out of 6,078
• Year to date:
  • Site-wide: 7,870 out of 60,222
• Since beginning of last month:
  • Site-wide: 461 out of 60,222

Genome-wide selection footprints and deleterious variations in young Asian allotetraploid rapeseed

• Downloaded 297 times
• Download rankings, all-time:
  • Site-wide: 31,744 out of 60,222
  • In genomics: 3,039 out of 4,168
• Year to date:
  • Site-wide: 24,327 out of 60,222
• Since beginning of last month:
  • Site-wide: 53,883 out of 60,222

Dosage effect of multiple genes accounts for multisystem disorder of myotonic dystrophy type 1

• Downloaded 270 times
• Download rankings, all-time:
  • Site-wide: 34,411 out of 60,222
  • In genetics: 2,169 out of 3,432
• Year to date:
  • Site-wide: 11,719 out of 60,222
• Since beginning of last month:
  • Site-wide: 26,490 out of 60,222

Molecular and cellular phenotypic differences distinguish murine syngeneic models from human tumors

• Downloaded 247 times
• Download rankings, all-time:
  • Site-wide: 36,841 out of 60,222
  • In cancer biology: 1,144 out of 1,975
• Year to date:
  • Site-wide: 13,323 out of 60,222
• Since beginning of last month:
  • Site-wide: 3,746 out of 60,222

MicroRNA-transcriptome networks in whole blood and monocytes of women undergoing preterm labor

• Downloaded 222 times
• Download rankings, all-time:
  • Site-wide: 39,620 out of 60,222
  • In systems biology: 1,256 out of 1,707
• Year to date:
  • Site-wide: 15,494 out of 60,222
• Since beginning of last month:
  • Site-wide: 19,839 out of 60,222

ADAMTS-family protease MIG-17 regulates synaptic allometry by modifying the extracellular matrix and modulating glia morphology during growth

• Downloaded 220 times
• Download rankings, all-time:
  • Site-wide: 39,858 out of 60,222
  • In neuroscience: 6,888 out of 10,621
• Year to date:
  • Site-wide: 15,678 out of 60,222
• Since beginning of last month:
  • Site-wide: 1,030 out of 60,222

Mechanistic insights on metabolic dysfunction in PTSD: Role of glucocorticoid receptor sensitivity and energy deficit

• Downloaded 198 times
• Download rankings, all-time:
  • Site-wide: 42,432 out of 60,222
  • In systems biology: 1,331 out of 1,707
• Year to date:
  • Site-wide: 21,480 out of 60,222
• Since beginning of last month:
  • Site-wide: 25,562 out of 60,222

PSC-RED, an Albumin-Free Robust Erythroid Differentiation Method to Produce Enucleated Red Blood Cells from Human Pluripotent Stem Cells

• Downloaded 191 times
• Download rankings, all-time:
  • Site-wide: 43,316 out of 60,222
  • In bioengineering: 776 out of 1,172
• Year to date:
  • Site-wide: 18,845 out of 60,222
• Since beginning of last month:
  • Site-wide: 14,978 out of 60,222

Transcriptional Network Analysis on Brains Reveals a Potential Regulatory Role of PPP1R3F in Autism Spectrum Disorders

• Downloaded 174 times
• Download rankings, all-time:
  • Site-wide: 45,373 out of 60,222
  • In bioinformatics: 5,122 out of 6,078
• Year to date:
  • Site-wide: 45,204 out of 60,222
• Since beginning of last month:
  • Site-wide: 51,759 out of 60,222

Temporal Small RNA Expression Profiling Under Drought Reveals a Potential Regulatory Role of snoRNAs in Drought Responses of Maize

• Downloaded 142 times
• Download rankings, all-time:
  • Site-wide: 49,636 out of 60,222
  • In genomics: 3,851 out of 4,168
• Year to date:
  • Site-wide: 47,415 out of 60,222
• Since beginning of last month:
  • Site-wide: 58,368 out of 60,222

A novel phyllosphere resident Protomyces species that interacts with the Arabidopsis immune system.

• Downloaded 138 times
• Download rankings, all-time:
  • Site-wide: 50,178 out of 60,222
  • In microbiology: 3,668 out of 4,799
• Year to date:
  • Site-wide: 27,335 out of 60,222
• Since beginning of last month:
  • Site-wide: 31,290 out of 60,222

MNC-RED a Chemically Defined Method to Produce Enucleated Red Blood Cells from Adult Peripheral Blood Mononuclear Cells

• Downloaded 114 times
• Download rankings, all-time:
  • Site-wide: 53,312 out of 60,222
  • In bioengineering: 983 out of 1,172
• Year to date:
  • Site-wide: 32,756 out of 60,222
• Since beginning of last month:
  • Site-wide: 27,846 out of 60,222

Epidemiology, Microbiology and Therapeutic Consequences of Chronic Osteomyelitis in Northern China: A Retrospective Analysis of 255 Patients

• Downloaded 111 times
• Download rankings, all-time:
  • Site-wide: 53,591 out of 60,222
  • In microbiology: 4,014 out of 4,799
• Year to date:
  • Site-wide: 54,056 out of 60,222
• Since beginning of last month:
  • Site-wide: 52,761 out of 60,222

Temporal regulation of prenatal embryonic development by paternal imprinted loci

• Downloaded 91 times
• Download rankings, all-time:
  • Site-wide: 55,865 out of 60,222
  • In developmental biology: 1,702 out of 1,790
• Year to date:
  • Site-wide: 39,362 out of 60,222
• Since beginning of last month:
  • Site-wide: 17,595 out of 60,222