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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 53,026 bioRxiv papers from 245,564 authors.

Author: Stephen R. Quake

Rankings

  • All-time downloads: 55,962 (rank: 188 out of 245,564)
  • Categories:
    • bioengineering: 929 (rank: 804 out of 5,514)
    • bioinformatics: 2,151 (rank: 2,843 out of 21,725)
    • cancer biology: 2,140 (rank: 649 (tie) out of 13,800)
    • cell biology: 25,633 (rank: 1 out of 15,448)
    • genetics: 1,400 (rank: 6,100 (tie) out of 23,769)
    • genomics: 9,069 (rank: 974 out of 28,414)
    • immunology: 4,174 (rank: 94 out of 9,915)
    • microbiology: 5,932 (rank: 70 out of 23,861)
    • neuroscience: 2,902 (rank: 2,136 out of 37,990)
    • systems biology: 1,632 (rank: 782 (tie) out of 7,301)

Downloads per author, site-wide

Preprints

Serotonin Neurons in the Dorsal and Medial Raphe Nuclei: from Single-Cell Transcriptomes to Whole-Brain Projections

neuroscience more details view paper

No bioRxiv download data for this paper yet.

The Human Cell Atlas

cell biology more details view paper
  • Downloaded 11,515 times
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    • Site-wide: 68 out of 53,026
    • In cell biology: 2 out of 2,499
  • Year to date:
    • Site-wide: 4,755 out of 53,026
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    • Site-wide: 6,293 out of 53,026

Single-cell transcriptomic characterization of 20 organs and tissues from individual mice creates a Tabula Muris

cell biology more details view paper
  • Downloaded 11,164 times
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    • In cell biology: 3 out of 2,499
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    • Site-wide: 574 out of 53,026
  • Since beginning of last month:
    • Site-wide: 1,114 out of 53,026

Classifying Drosophila Olfactory Projection Neuron Subtypes by Single-cell RNA Sequencing

genomics more details view paper
  • Downloaded 2,491 times
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    • In genomics: 295 out of 3,782
  • Year to date:
    • Site-wide: 15,331 out of 53,026
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    • Site-wide: 21,830 out of 53,026

Developmental heterogeneity of microglia and brain myeloid cells revealed by deep single-cell RNA sequencing

neuroscience more details view paper
  • Downloaded 2,017 times
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    • In neuroscience: 251 out of 9,304
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    • Site-wide: 1,013 out of 53,026
  • Since beginning of last month:
    • Site-wide: 1,775 out of 53,026

Single cell transcriptome analysis of human pancreas reveals transcriptional signatures of aging and somatic mutation patterns.

genomics more details view paper
  • Downloaded 1,644 times
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    • In genomics: 536 out of 3,782
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    • Site-wide: 20,461 out of 53,026
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    • Site-wide: 26,716 out of 53,026

Single-cell RNA-seq reveals intrinsic and extrinsic regulatory heterogeneity in yeast responding to stress

systems biology more details view paper
  • Downloaded 1,632 times
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    • In systems biology: 63 out of 1,548
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    • Site-wide: 30,400 out of 53,026
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    • Site-wide: 36,503 out of 53,026

A Single Cell Transcriptomic Atlas Characterizes Aging Tissues in the Mouse

cell biology more details view paper
  • Downloaded 1,603 times
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    • In cell biology: 66 out of 2,499
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    • Site-wide: 260 out of 53,026
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    • Site-wide: 30 out of 53,026

Humans are colonized by many uncharacterized and highly divergent microbes

microbiology more details view paper
  • Downloaded 1,423 times
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    • In microbiology: 86 out of 4,157
  • Year to date:
    • Site-wide: 39,391 out of 53,026
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    • Site-wide: 45,362 out of 53,026

Nonivasive prenatal diagnosis of single-gene disorders using droplet digital PCR

genetics more details view paper
  • Downloaded 1,400 times
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    • In genetics: 309 out of 3,086
  • Year to date:
    • Site-wide: 5,950 out of 53,026
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    • Site-wide: 9,322 out of 53,026

Single-cell analysis identifies EpCAM+/CDH6+/TROP-2- cells as human liver progenitors.

cell biology more details view paper
  • Downloaded 1,351 times
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    • In cell biology: 93 out of 2,499
  • Year to date:
    • Site-wide: 2,707 out of 53,026
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    • Site-wide: 4,525 out of 53,026

Microfluidic-based mini-metagenomics enables discovery of novel microbial lineages from complex environmental samples

microbiology more details view paper
  • Downloaded 1,343 times
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    • In microbiology: 99 out of 4,157
  • Year to date:
    • Site-wide: 33,076 out of 53,026
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    • Site-wide: 26,128 out of 53,026

Detection of early stage pancreatic cancer using 5-hydroxymethylcytosine signatures in circulating cell free DNA

cancer biology more details view paper
  • Downloaded 1,272 times
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    • In cancer biology: 98 out of 1,706
  • Year to date:
    • Site-wide: 4,317 out of 53,026
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    • Site-wide: 6,801 out of 53,026

The murine transcriptome reveals global aging nodes with organ-specific phase and amplitude

genomics more details view paper
  • Downloaded 1,220 times
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    • In genomics: 764 out of 3,782
  • Year to date:
    • Site-wide: 444 out of 53,026
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    • Site-wide: 51 out of 53,026

Human IgE producing B cells have a unique transcriptional program and generate high affinity, allergen-specific antibodies

immunology more details view paper
  • Downloaded 1,173 times
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    • In immunology: 45 out of 1,225
  • Year to date:
    • Site-wide: 3,486 out of 53,026
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    • Site-wide: 5,970 out of 53,026

Neutral and niche dynamics in a synthetic microbial community

microbiology more details view paper
  • Downloaded 1,168 times
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    • In microbiology: 145 out of 4,157
  • Year to date:
    • Site-wide: 40,162 out of 53,026
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    • Site-wide: 40,088 out of 53,026

Single-cell transcriptional dynamics of flavivirus infection

microbiology more details view paper
  • Downloaded 1,149 times
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    • In microbiology: 150 out of 4,157
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    • Site-wide: 27,503 out of 53,026

Single cell RNAseq provides a molecular and cellular cartography of changes to the human endometrium through the menstrual cycle

genomics more details view paper
  • Downloaded 1,101 times
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    • Site-wide: 4,929 out of 53,026
    • In genomics: 858 out of 3,782
  • Year to date:
    • Site-wide: 2,583 out of 53,026
  • Since beginning of last month:
    • Site-wide: 1,444 out of 53,026

Pancreas patch-seq links physiologic dysfunction in diabetes to single-cell transcriptomic phenotypes

genomics more details view paper
  • Downloaded 1,047 times
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    • Site-wide: 5,342 out of 53,026
    • In genomics: 921 out of 3,782
  • Year to date:
    • Site-wide: 595 out of 53,026
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    • Site-wide: 1,475 out of 53,026

Self-assembling Manifolds in Single-cell RNA Sequencing Data

bioinformatics more details view paper
  • Downloaded 1,039 times
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    • Site-wide: 5,404 out of 53,026
    • In bioinformatics: 1,041 out of 5,533
  • Year to date:
    • Site-wide: 10,884 out of 53,026
  • Since beginning of last month:
    • Site-wide: None out of 53,026

Signatures of Selection in the Human Antibody Repertoire: Selective Sweeps, Competing Subclones, and Neutral Drift

immunology more details view paper
  • Downloaded 925 times
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    • In immunology: 77 out of 1,225
  • Year to date:
    • Site-wide: 40,323 out of 53,026
  • Since beginning of last month:
    • Site-wide: 44,507 out of 53,026

5-Hydroxymethylcytosine signatures in cell-free DNA provide information about tumor types and stages

genomics more details view paper
  • Downloaded 892 times
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    • Site-wide: 6,920 out of 53,026
    • In genomics: 1,121 out of 3,782
  • Year to date:
    • Site-wide: 32,544 out of 53,026
  • Since beginning of last month:
    • Site-wide: 28,873 out of 53,026

Single-Cell RNAseq analysis of infiltrating neoplastic cells at the migrating front of human glioblastoma

cancer biology more details view paper
  • Downloaded 868 times
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    • Site-wide: 7,210 out of 53,026
    • In cancer biology: 190 out of 1,706
  • Year to date:
    • Site-wide: 39,005 out of 53,026
  • Since beginning of last month:
    • Site-wide: 36,865 out of 53,026

Dynamics Of The Human Antibody Repertoire Following B-cell Depletion In Systemic Sclerosis

immunology more details view paper
  • Downloaded 774 times
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    • In immunology: 111 out of 1,225
  • Year to date:
    • Site-wide: 34,136 out of 53,026
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    • Site-wide: 37,262 out of 53,026

PhaMers identifies novel bacteriophage sequences from thermophilic hot springs

bioinformatics more details view paper
  • Downloaded 758 times
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    • In bioinformatics: 1,580 out of 5,533
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  • Since beginning of last month:
    • Site-wide: 15,350 out of 53,026

Hydrogenotrophic methanogenesis in archaeal phylum Verstraetearchaeota reveals the shared ancestry of all methanogens

microbiology more details view paper
  • Downloaded 680 times
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    • Site-wide: 10,329 out of 53,026
    • In microbiology: 461 out of 4,157
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    • Site-wide: 12,657 out of 53,026
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    • Site-wide: 29,382 out of 53,026

A Noninvasive Molecular Clock for Fetal Development Predicts Gestational Age and Preterm Delivery

bioengineering more details view paper
  • Downloaded 616 times
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    • Site-wide: 11,814 out of 53,026
    • In bioengineering: 182 out of 987
  • Year to date:
    • Site-wide: 33,131 out of 53,026
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    • Site-wide: 36,878 out of 53,026

Evolutionary Origin of the Mammalian Hematopoietic System Found in a Colonial Chordate

immunology more details view paper
  • Downloaded 578 times
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    • Site-wide: 12,831 out of 53,026
    • In immunology: 183 out of 1,225
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    • Site-wide: 12,979 out of 53,026
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    • Site-wide: 17,256 out of 53,026

Brain endothelial cells are exquisite sensors of age-related circulatory cues

neuroscience more details view paper
  • Downloaded 489 times
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    • In neuroscience: 2,601 out of 9,304
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    • Site-wide: 585 out of 53,026

c-Jun Overexpressing CAR-T Cells are Exhaustion-Resistant and Mediate Enhanced Antitumor Activity

immunology more details view paper
  • Downloaded 429 times
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    • In immunology: 290 out of 1,225
  • Year to date:
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    • Site-wide: 394 out of 53,026

Discrete and Continuous Cell Identities of the Adult Murine Striatum

neuroscience more details view paper
  • Downloaded 396 times
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    • Site-wide: 20,188 out of 53,026
    • In neuroscience: 3,342 out of 9,304
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  • Since beginning of last month:
    • Site-wide: 3,344 out of 53,026

Nucleic Acid Cleavage with a Hyperthermophilic Cas9 from an Unculturable Ignavibacterium

genomics more details view paper
  • Downloaded 386 times
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    • In genomics: 2,341 out of 3,782
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    • Site-wide: 3,539 out of 53,026
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    • Site-wide: 14,981 out of 53,026

Modeling Spatial Correlation of Transcripts With Application to Developing Pancreas

bioinformatics more details view paper
  • Downloaded 354 times
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    • In bioinformatics: 3,214 out of 5,533
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    • Site-wide: 33,467 out of 53,026

A single-parasite transcriptional landscape of asexual development in Toxoplasma gondii

bioengineering more details view paper
  • Downloaded 313 times
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    • In bioengineering: 433 out of 987
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    • Site-wide: 4,892 out of 53,026
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    • Site-wide: 663 out of 53,026

Matrix-corrected mass spectrometry enables sensitive detection of food allergens and reveals widespread soy contamination of processed foods

immunology more details view paper
  • Downloaded 295 times
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    • Site-wide: 36,768 out of 53,026
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    • Site-wide: 46,473 out of 53,026

Viral Taxonomy Derived From Evolutionary Genome Relationships

genomics more details view paper
  • Downloaded 288 times
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    • In genomics: 2,736 out of 3,782
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  • Since beginning of last month:
    • Site-wide: 21,833 out of 53,026

Cell-free DNA Reveals Potential Zoonotic Reservoirs in Non-Human Primates

microbiology more details view paper
  • Downloaded 169 times
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    • In microbiology: 2,652 out of 4,157
  • Year to date:
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    • Site-wide: 22,997 out of 53,026

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