Author: Bernd Bodenmiller

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Preprints

The Human Cell Atlas

• Downloaded 12,553 times
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  • Site-wide: 542
  • In cell biology: 4
• Year to date:
  • Site-wide: 18,069
• Since beginning of last month:
  • Site-wide: 18,069

Modelling cell-cell interactions from spatial molecular data with spatial variance component analysis

• Downloaded 3,626 times
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  • Site-wide: 2,939
  • In bioinformatics: 293
• Year to date:
  • Site-wide: 27,485
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  • Site-wide: 27,485

Systematic analysis of cell phenotypes and cellular social networks in tissues using the histology topography cytometry analysis toolbox (histoCAT)

• Downloaded 3,326 times
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  • Site-wide: 3,327
  • In systems biology: 53
• Year to date:
  • Site-wide: 29,528
• Since beginning of last month:
  • Site-wide: 29,528

Channel crosstalk correction in suspension and imaging mass cytometry

• Downloaded 2,766 times
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  • Site-wide: 4,288
  • In bioinformatics: 466
• Year to date:
  • Site-wide: 12,057
• Since beginning of last month:
  • Site-wide: 12,057

The Tumor Profiler Study: Integrated, multi-omic, functional tumor profiling for clinical decision support

• Downloaded 2,220 times
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  • Site-wide: 5,951
  • In oncology: 5
• Year to date:
  • Site-wide: 2,382
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  • Site-wide: 2,382

Embedding single-cell experimental conditions to reveal manifold structure of cancer drug perturbation effects

• Downloaded 2,154 times
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  • Site-wide: 6,211
  • In bioinformatics: 740
• Year to date:
  • Site-wide: 16,226
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  • Site-wide: 16,226

Deciphering the Signaling Network Landscape of Breast Cancer Improves Drug Sensitivity Prediction

• Downloaded 1,673 times
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  • Site-wide: 9,097
  • In systems biology: 176
• Year to date:
  • Site-wide: 7,316
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  • Site-wide: 7,316

A distinct innate immune signature marks progression from mild to severe COVID-19

• Downloaded 1,382 times
• Download rankings, all-time:
  • Site-wide: 12,047
  • In immunology: 328
• Year to date:
  • Site-wide: 7,485
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  • Site-wide: 7,485

Highly multiplexed molecular and cellular mapping of breast cancer tissue in three dimensions using mass tomography.

• Downloaded 1,373 times
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  • Site-wide: 12,164
  • In cell biology: 346
• Year to date:
  • Site-wide: 8,709
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  • Site-wide: 8,709

Analysis of the human kinome and phosphatome reveals diseased signaling networks induced by overexpression

• Downloaded 1,359 times
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  • Site-wide: 12,335
  • In systems biology: 245
• Year to date:
  • Site-wide: 52,825
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  • Site-wide: 52,825

Learning Edge Rewiring in EMT from Single Cell Data

• Downloaded 1,145 times
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  • Site-wide: 15,995
  • In systems biology: 328
• Year to date:
  • Site-wide: 80,896
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  • Site-wide: 80,896

Lymphopenia-induced T cell proliferation is a hallmark of severe COVID-19

• Downloaded 889 times
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  • Site-wide: 23,192
  • In immunology: 653
• Year to date:
  • Site-wide: 19,903
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  • Site-wide: 19,903

A quantitative analysis of the interplay of environment, neighborhood and cell state in 3D spheroids

• Downloaded 643 times
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  • Site-wide: 36,252
  • In systems biology: 846
• Year to date:
  • Site-wide: 30,978
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  • Site-wide: 30,978

cytomapper: an R/Bioconductor package for visualisation of highly multiplexed imaging data

• Downloaded 450 times
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  • Site-wide: 55,620
  • In bioinformatics: 5,664
• Year to date:
  • Site-wide: 13,762
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  • Site-wide: 13,762

Multidimensional single-cell modeling of cellular signaling

• Downloaded 333 times
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  • Site-wide: 73,914
  • In systems biology: 1,790
• Year to date:
  • Site-wide: 40,998
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  • Site-wide: 40,998

Single-Cell Proteomics Defines the Cellular Heterogeneity of Localized Prostate Cancer

• Downloaded 151 times
• Download rankings, all-time:
  • Site-wide: 111,495
  • In cancer biology: 3,449
• Year to date:
  • Site-wide: 6,169
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  • Site-wide: 6,169