Rxivist logo

Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 55,041 bioRxiv papers from 254,018 authors.

Author: Martin Hemberg

Rankings

  • All-time downloads: 32,557 (rank: 440 out of 254,018)
  • Categories:
    • bioinformatics: 14,748 (rank: 107 out of 21,944)
    • cell biology: 11,515 (rank: 46 (tie) out of 15,552)
    • genomics: 2,517 (rank: 4,896 (tie) out of 28,602)
    • molecular biology: 3,777 (rank: 125 out of 10,576)

Downloads per author, site-wide

Preprints

souporcell: Robust clustering of single cell RNAseq by genotype and ambient RNA inference without reference genotypes

bioinformatics more details view paper

No bioRxiv download data for this paper yet.

Alternative splicing modulation by G-quadruplexes

genomics more details view paper

No bioRxiv download data for this paper yet.

The Human Cell Atlas

cell biology more details view paper
  • Downloaded 11,515 times
  • Download rankings, all-time:
    • Site-wide: 70 out of 55,041
    • In cell biology: 2 out of 2,600
  • Year to date:
    • Site-wide: 5,068 out of 55,041
  • Since beginning of last month:
    • Site-wide: 15,354 out of 55,041

SC3 - consensus clustering of single-cell RNA-Seq data

bioinformatics more details view paper
  • Downloaded 4,648 times
  • Download rankings, all-time:
    • Site-wide: 387 out of 55,041
    • In bioinformatics: 79 out of 5,694
  • Year to date:
    • Site-wide: 5,466 out of 55,041
  • Since beginning of last month:
    • Site-wide: 3,951 out of 55,041

Dropout-based feature selection for scRNASeq

bioinformatics more details view paper
  • Downloaded 3,995 times
  • Download rankings, all-time:
    • Site-wide: 527 out of 55,041
    • In bioinformatics: 105 out of 5,694
  • Year to date:
    • Site-wide: 1,835 out of 55,041
  • Since beginning of last month:
    • Site-wide: 3,525 out of 55,041

scmap - A tool for unsupervised projection of single cell RNA-seq data

bioinformatics more details view paper
  • Downloaded 3,083 times
  • Download rankings, all-time:
    • Site-wide: 863 out of 55,041
    • In bioinformatics: 175 out of 5,694
  • Year to date:
    • Site-wide: 4,886 out of 55,041
  • Since beginning of last month:
    • Site-wide: 15,669 out of 55,041

Genomic positional conservation identifies topological anchor point (tap)RNAs linked to developmental loci

molecular biology more details view paper
  • Downloaded 2,401 times
  • Download rankings, all-time:
    • Site-wide: 1,366 out of 55,041
    • In molecular biology: 32 out of 1,666
  • Year to date:
    • Site-wide: 43,729 out of 55,041
  • Since beginning of last month:
    • Site-wide: 48,428 out of 55,041

Discrete Distributional Differential Expression (D3E) - A Tool for Gene Expression Analysis of Single-cell RNA-seq Data

bioinformatics more details view paper
  • Downloaded 1,583 times
  • Download rankings, all-time:
    • Site-wide: 2,788 out of 55,041
    • In bioinformatics: 563 out of 5,694
  • Year to date:
    • Site-wide: 23,637 out of 55,041
  • Since beginning of last month:
    • Site-wide: 17,203 out of 55,041

The Malaria Cell Atlas: a comprehensive reference of single parasite transcriptomes across the complete Plasmodium life cycle

genomics more details view paper
  • Downloaded 1,551 times
  • Download rankings, all-time:
    • Site-wide: 2,880 out of 55,041
    • In genomics: 573 out of 3,902
  • Year to date:
    • Site-wide: 300 out of 55,041
  • Since beginning of last month:
    • Site-wide: 641 out of 55,041

The Aquarius/EMB-4 helicase licenses co-transcriptional gene silencing

molecular biology more details view paper
  • Downloaded 1,376 times
  • Download rankings, all-time:
    • Site-wide: 3,509 out of 55,041
    • In molecular biology: 97 out of 1,666
  • Year to date:
    • Site-wide: 36,995 out of 55,041
  • Since beginning of last month:
    • Site-wide: 26,345 out of 55,041

Simulation based benchmarking of isoform quantification in single-cell RNA-seq

bioinformatics more details view paper
  • Downloaded 1,038 times
  • Download rankings, all-time:
    • Site-wide: 5,527 out of 55,041
    • In bioinformatics: 1,053 out of 5,694
  • Year to date:
    • Site-wide: 12,940 out of 55,041
  • Since beginning of last month:
    • Site-wide: 19,208 out of 55,041

Non-canonical secondary structures arising from non-B DNA motifs are determinants of mutagenesis

genomics more details view paper
  • Downloaded 701 times
  • Download rankings, all-time:
    • Site-wide: 10,097 out of 55,041
    • In genomics: 1,461 out of 3,902
  • Year to date:
    • Site-wide: 39,428 out of 55,041
  • Since beginning of last month:
    • Site-wide: 43,655 out of 55,041

MPRAnator: a web-based tool for the design of Massively Parallel Reporter Assay experiments.

bioinformatics more details view paper
  • Downloaded 401 times
  • Download rankings, all-time:
    • Site-wide: 20,337 out of 55,041
    • In bioinformatics: 2,939 out of 5,694
  • Year to date:
    • Site-wide: 44,533 out of 55,041
  • Since beginning of last month:
    • Site-wide: 41,480 out of 55,041

Transcription-coupled repair and mismatch repair contribute towards preserving genome integrity at mononucleotide repeat tracts

genomics more details view paper
  • Downloaded 265 times
  • Download rankings, all-time:
    • Site-wide: 29,816 out of 55,041
    • In genomics: 2,858 out of 3,902
  • Year to date:
    • Site-wide: 6,919 out of 55,041
  • Since beginning of last month:
    • Site-wide: 14,364 out of 55,041

Sign up for the Rxivist weekly newsletter! (Click here for more details.)


News