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Author: Olivier Elemento

Rankings

  • All-time downloads: 70,342 (rank: 2,172 )
  • Categories:
    • bioinformatics: 19,797 (rank: 312 )
    • cancer biology: 13,860 (rank: 129 )
    • cardiovascular medicine: 340 (rank: 1,791 (tie) )
    • cell biology: 3,326 (rank: 1,541 )
    • epidemiology: 376 (rank: 20,092 (tie) )
    • genetic and genomic medicine: 4,158 (rank: 355 )
    • genetics: 1,907 (rank: 9,692 (tie) )
    • genomics: 9,343 (rank: 2,206 )
    • infectious diseases: 6,593 (rank: 6,851 )
    • microbiology: 1,077 (rank: 14,722 (tie) )
    • neuroscience: 212 (rank: 74,063 (tie) )
    • oncology: 1,897 (rank: 212 )
    • pharmacology and toxicology: 5,518 (rank: 116 )
    • radiology and imaging: 1,223 (rank: 348 (tie) )
    • systems biology: 715 (rank: 6,613 (tie) )

Downloads per author, site-wide

Preprints

Breast Cancer Histopathological Image Classification: A Deep Learning Approach

bioinformatics more details view paper
  • Downloaded 7,862 times
  • Download rankings, all-time:
    • Site-wide: 1,252
    • In bioinformatics: 72
  • Year to date:
    • Site-wide: 5,564
  • Since beginning of last month:
    • Site-wide: 7,007

Challenges in Using ctDNA to Achieve Early Detection of Cancer

cancer biology more details view paper
  • Downloaded 6,021 times
  • Download rankings, all-time:
    • Site-wide: 1,777
    • In cancer biology: 22
  • Year to date:
    • Site-wide: 11,949
  • Since beginning of last month:
    • Site-wide: 16,237

Tumor mutational landscape is a record of the pre-malignant state

genomics more details view paper
  • Downloaded 3,660 times
  • Download rankings, all-time:
    • Site-wide: 3,574
    • In genomics: 379
  • Year to date:
    • Site-wide: 18,790
  • Since beginning of last month:
    • Site-wide: 20,853

A harmonized meta-knowledgebase of clinical interpretations of cancer genomic variants

bioinformatics more details view paper
  • Downloaded 3,404 times
  • Download rankings, all-time:
    • Site-wide: 3,938
    • In bioinformatics: 386
  • Year to date:
    • Site-wide: 33,835
  • Since beginning of last month:
    • Site-wide: 28,730

A New Big-Data Paradigm For Target Identification And Drug Discovery

pharmacology and toxicology more details view paper
  • Downloaded 3,200 times
  • Download rankings, all-time:
    • Site-wide: 4,313
    • In pharmacology and toxicology: 23
  • Year to date:
    • Site-wide: 58,875
  • Since beginning of last month:
    • Site-wide: 54,420

A systematic framework for assessing the clinical impact of polygenic risk scores

genetic and genomic medicine more details view paper
  • Downloaded 3,088 times
  • Download rankings, all-time:
    • Site-wide: 4,535
    • In genetic and genomic medicine: 17
  • Year to date:
    • Site-wide: 1,868
  • Since beginning of last month:
    • Site-wide: 5,064

Novel patterns of complex structural variation revealed across thousands of cancer genome graphs

genomics more details view paper
  • Downloaded 2,829 times
  • Download rankings, all-time:
    • Site-wide: 5,143
    • In genomics: 531
  • Year to date:
    • Site-wide: 20,072
  • Since beginning of last month:
    • Site-wide: 15,923

Deep Convolutional Neural Networks Enable Discrimination of Heterogeneous Digital Pathology Images

bioinformatics more details view paper
  • Downloaded 2,824 times
  • Download rankings, all-time:
    • Site-wide: 5,156
    • In bioinformatics: 524
  • Year to date:
    • Site-wide: 112,941
  • Since beginning of last month:
    • Site-wide: 94,740

The spatio-temporal landscape of lung pathology in SARS-CoV-2 infection

infectious diseases more details view paper
  • Downloaded 2,601 times
  • Download rankings, all-time:
    • Site-wide: 5,781
    • In infectious diseases: 971
  • Year to date:
    • Site-wide: 4,904
  • Since beginning of last month:
    • Site-wide: 12,465

Robust Automated Assessment of Human Blastocyst Quality using Deep Learning

bioinformatics more details view paper
  • Downloaded 2,516 times
  • Download rankings, all-time:
    • Site-wide: 6,092
    • In bioinformatics: 651
  • Year to date:
    • Site-wide: 25,287
  • Since beginning of last month:
    • Site-wide: 38,010

Single-cell analysis of the muscle stem cell hierarchy identifies heterotypic communication signals involved in skeletal muscle regeneration

cell biology more details view paper
  • Downloaded 1,948 times
  • Download rankings, all-time:
    • Site-wide: 8,870
    • In cell biology: 207
  • Year to date:
    • Site-wide: 48,823
  • Since beginning of last month:
    • Site-wide: 69,585

Clinical and Genetic Characteristics of Covid-19 Patients from UK Biobank

infectious diseases more details view paper
  • Downloaded 1,774 times
  • Download rankings, all-time:
    • Site-wide: 10,192
    • In infectious diseases: 1,353
  • Year to date:
    • Site-wide: 31,789
  • Since beginning of last month:
    • Site-wide: 38,924

Lineage reversion drives WNT independence in intestinal cancer

cancer biology more details view paper
  • Downloaded 1,543 times
  • Download rankings, all-time:
    • Site-wide: 12,456
    • In cancer biology: 252
  • Year to date:
    • Site-wide: 27,987
  • Since beginning of last month:
    • Site-wide: 40,751

A Machine Learning Approach Predicts Tissue-Specific Drug Adverse Events

pharmacology and toxicology more details view paper
  • Downloaded 1,315 times
  • Download rankings, all-time:
    • Site-wide: 15,909
    • In pharmacology and toxicology: 90
  • Year to date:
    • Site-wide: 80,625
  • Since beginning of last month:
    • Site-wide: 73,406

Building an International Consortium for Tracking Coronavirus Health Status

infectious diseases more details view paper
  • Downloaded 1,301 times
  • Download rankings, all-time:
    • Site-wide: 16,158
    • In infectious diseases: 1,689
  • Year to date:
    • Site-wide: 62,606
  • Since beginning of last month:
    • Site-wide: 26,810

AGFusion: annotate and visualize gene fusions

bioinformatics more details view paper
  • Downloaded 1,275 times
  • Download rankings, all-time:
    • Site-wide: 16,653
    • In bioinformatics: 1,958
  • Year to date:
    • Site-wide: 62,416
  • Since beginning of last month:
    • Site-wide: 98,514

Biopsy-free prediction of prostate cancer aggressiveness using deep learning and radiology imaging

radiology and imaging more details view paper
  • Downloaded 1,223 times
  • Download rankings, all-time:
    • Site-wide: 17,708
    • In radiology and imaging: 40
  • Year to date:
    • Site-wide: 6,144
  • Since beginning of last month:
    • Site-wide: 52,133

A machine learning approach predicts essential genes and pharmacological targets in cancer

cancer biology more details view paper
  • Downloaded 1,211 times
  • Download rankings, all-time:
    • Site-wide: 17,959
    • In cancer biology: 406
  • Year to date:
    • Site-wide: 30,491
  • Since beginning of last month:
    • Site-wide: 17,290

Predicting peptide presentation by major histocompatibility complex class I using one million peptides

bioinformatics more details view paper
  • Downloaded 1,174 times
  • Download rankings, all-time:
    • Site-wide: 18,812
    • In bioinformatics: 2,184
  • Year to date:
    • Site-wide: 119,079
  • Since beginning of last month:
    • Site-wide: 126,545

Age, Sex, and Genetics Influence the Abundance of Infiltrating Immune Cells in Human Tissues

genetics more details view paper
  • Downloaded 1,136 times
  • Download rankings, all-time:
    • Site-wide: 19,766
    • In genetics: 928
  • Year to date:
    • Site-wide: 77,725
  • Since beginning of last month:
    • Site-wide: 68,492

Multi-task learning predicts drug combination synergy in cells and in the clinic

cancer biology more details view paper
  • Downloaded 1,099 times
  • Download rankings, all-time:
    • Site-wide: 20,722
    • In cancer biology: 486
  • Year to date:
    • Site-wide: 45,334
  • Since beginning of last month:
    • Site-wide: 44,730

The Precision Medicine Knowledge Base: an online application for collaborative editing, maintenance and sharing of structured clinical-grade cancer mutations interpretations

genomics more details view paper
  • Downloaded 1,081 times
  • Download rankings, all-time:
    • Site-wide: 21,233
    • In genomics: 2,045
  • Year to date:
    • Site-wide: 63,159
  • Since beginning of last month:
    • Site-wide: 94,431

Systemic Tissue and Cellular Disruption from SARS-CoV-2 Infection revealed in COVID-19 Autopsies and Spatial Omics Tissue Maps

microbiology more details view paper
  • Downloaded 1,077 times
  • Download rankings, all-time:
    • Site-wide: 21,339
    • In microbiology: 1,237
  • Year to date:
    • Site-wide: 2,482
  • Since beginning of last month:
    • Site-wide: 8,660

Generation of pulmonary neuro-endocrine cells and tumors resembling small cell lung cancers from human embryonic stem cells

cancer biology more details view paper
  • Downloaded 1,068 times
  • Download rankings, all-time:
    • Site-wide: 21,625
    • In cancer biology: 520
  • Year to date:
    • Site-wide: 105,603
  • Since beginning of last month:
    • Site-wide: 96,803

Extracellular Microenvironment in Patient-derived Hydrogel Organoids of Prostate Cancer Regulates Therapeutic Response

oncology more details view paper
  • Downloaded 979 times
  • Download rankings, all-time:
    • Site-wide: 24,555
    • In oncology: 31
  • Year to date:
    • Site-wide: 20,902
  • Since beginning of last month:
    • Site-wide: 36,518

A reference single-cell transcriptomic atlas of human skeletal muscle tissue reveals bifurcated muscle stem cell populations

cell biology more details view paper
  • Downloaded 972 times
  • Download rankings, all-time:
    • Site-wide: 24,835
    • In cell biology: 895
  • Year to date:
    • Site-wide: 49,896
  • Since beginning of last month:
    • Site-wide: 36,931

Longitudinal immune profiling of mild and severe COVID-19 reveals innate and adaptive immune dysfunction and provides an early prediction tool for clinical progression

infectious diseases more details view paper
  • Downloaded 917 times
  • Download rankings, all-time:
    • Site-wide: 26,965
    • In infectious diseases: 2,165
  • Year to date:
    • Site-wide: 25,069
  • Since beginning of last month:
    • Site-wide: 19,813

Using Histopathology Images to Predict Chromosomal Instability in Breast Cancer: A Deep Learning Approach

genetic and genomic medicine more details view paper
  • Downloaded 793 times
  • Download rankings, all-time:
    • Site-wide: 33,024
    • In genetic and genomic medicine: 127
  • Year to date:
    • Site-wide: 14,460
  • Since beginning of last month:
    • Site-wide: 22,500

Leveraging phenotypic variability to identify genetic interactions in human phenotypes

genetics more details view paper
  • Downloaded 771 times
  • Download rankings, all-time:
    • Site-wide: 34,328
    • In genetics: 1,583
  • Year to date:
    • Site-wide: 16,670
  • Since beginning of last month:
    • Site-wide: 14,237

Discovery and reporting of clinically-relevant germline variants in advanced cancer patients assessed using whole-exome sequencing

genomics more details view paper
  • Downloaded 764 times
  • Download rankings, all-time:
    • Site-wide: 34,741
    • In genomics: 2,967
  • Year to date:
    • Site-wide: 109,694
  • Since beginning of last month:
    • Site-wide: None

EthSEQ: ethnicity annotation from whole exome sequencing data

bioinformatics more details view paper
  • Downloaded 742 times
  • Download rankings, all-time:
    • Site-wide: 36,235
    • In bioinformatics: 3,968
  • Year to date:
    • Site-wide: 126,491
  • Since beginning of last month:
    • Site-wide: 125,331

Accelerated lipid catabolism and autophagy are cancer survival mechanisms under inhibited glutaminolysis

cancer biology more details view paper
  • Downloaded 738 times
  • Download rankings, all-time:
    • Site-wide: 36,509
    • In cancer biology: 975
  • Year to date:
    • Site-wide: 82,892
  • Since beginning of last month:
    • Site-wide: 68,856

A virtual B cell lymphoma model to predict effective combination therapy

systems biology more details view paper
  • Downloaded 715 times
  • Download rankings, all-time:
    • Site-wide: 38,157
    • In systems biology: 835
  • Year to date:
    • Site-wide: 116,148
  • Since beginning of last month:
    • Site-wide: 126,744

Dynamic transcriptome profiles within spermatogonial and spermatocyte populations during postnatal testis maturation revealed by single-cell sequencing

genomics more details view paper
  • Downloaded 660 times
  • Download rankings, all-time:
    • Site-wide: 42,409
    • In genomics: 3,431
  • Year to date:
    • Site-wide: 116,446
  • Since beginning of last month:
    • Site-wide: 132,388

A machine learning and network framework to discover new indications for small molecules

pharmacology and toxicology more details view paper
  • Downloaded 556 times
  • Download rankings, all-time:
    • Site-wide: 52,570
    • In pharmacology and toxicology: 309
  • Year to date:
    • Site-wide: 106,062
  • Since beginning of last month:
    • Site-wide: 88,351

Defining the transcriptional landscape of infiltrating immune cells in human and mouse bladder cancer.

cancer biology more details view paper
  • Downloaded 532 times
  • Download rankings, all-time:
    • Site-wide: 55,445
    • In cancer biology: 1,555
  • Year to date:
    • Site-wide: 28,532
  • Since beginning of last month:
    • Site-wide: 49,372

Epigenetic analysis identifies factors driving racial disparity in prostate cancer

cancer biology more details view paper
  • Downloaded 456 times
  • Download rankings, all-time:
    • Site-wide: 65,836
    • In cancer biology: 1,905
  • Year to date:
    • Site-wide: 69,231
  • Since beginning of last month:
    • Site-wide: 58,288

Chemical Systems Biology Reveals Mechanisms of Glucocorticoid Receptor Signaling

pharmacology and toxicology more details view paper
  • Downloaded 447 times
  • Download rankings, all-time:
    • Site-wide: 67,141
    • In pharmacology and toxicology: 421
  • Year to date:
    • Site-wide: 61,911
  • Since beginning of last month:
    • Site-wide: 90,867

CIC is a Critical Regulator of Neuronal Differentiation

cell biology more details view paper
  • Downloaded 406 times
  • Download rankings, all-time:
    • Site-wide: 73,996
    • In cell biology: 3,368
  • Year to date:
    • Site-wide: 118,033
  • Since beginning of last month:
    • Site-wide: 108,740

Social and Clinical Determinants of COVID-19 Outcomes: Modeling Real-World Data from a Pandemic Epicenter

epidemiology more details view paper
  • Downloaded 376 times
  • Download rankings, all-time:
    • Site-wide: 79,390
    • In epidemiology: 3,359
  • Year to date:
    • Site-wide: 11,350
  • Since beginning of last month:
    • Site-wide: 16,626

Functional Comparison of Different Exome Capture-based Methods for Transcriptomic Profiling of Formalin-Fixed Paraffin-Embedded Tumor Samples

oncology more details view paper
  • Downloaded 358 times
  • Download rankings, all-time:
    • Site-wide: 82,797
    • In oncology: 138
  • Year to date:
    • Site-wide: 12,132
  • Since beginning of last month:
    • Site-wide: 14,783

SPOP mutation confers sensitivity to AR-targeted therapy in prostate cancer by reshaping the androgen-driven chromatin landscape

cancer biology more details view paper
  • Downloaded 345 times
  • Download rankings, all-time:
    • Site-wide: 85,459
    • In cancer biology: 2,546
  • Year to date:
    • Site-wide: 12,823
  • Since beginning of last month:
    • Site-wide: 17,615

Prediction of Venous Thromboembolism Based on Clinical and Genetic Factors

cardiovascular medicine more details view paper
  • Downloaded 340 times
  • Download rankings, all-time:
    • Site-wide: 86,580
    • In cardiovascular medicine: 160
  • Year to date:
    • Site-wide: 91,393
  • Since beginning of last month:
    • Site-wide: 64,439

Pan-cancer analysis reveals unique molecular patterns associated with age

oncology more details view paper
  • Downloaded 330 times
  • Download rankings, all-time:
    • Site-wide: 88,666
    • In oncology: 156
  • Year to date:
    • Site-wide: 62,116
  • Since beginning of last month:
    • Site-wide: 111,333

Function and clinical relevance of RHAMM isoforms in pancreatic tumor progression

cancer biology more details view paper
  • Downloaded 297 times
  • Download rankings, all-time:
    • Site-wide: 96,098
    • In cancer biology: 2,875
  • Year to date:
    • Site-wide: 114,038
  • Since beginning of last month:
    • Site-wide: 104,288

Integrative genomic, transcriptomic, and epigenomic analyses of benign prostatic hyperplasia reveal new options for therapy

genomics more details view paper
  • Downloaded 288 times
  • Download rankings, all-time:
    • Site-wide: 97,983
    • In genomics: 5,977
  • Year to date:
    • Site-wide: 119,720
  • Since beginning of last month:
    • Site-wide: 83,403

Imatinib overrides taxane resistance by selective inhibition of novel CLIP1 variant obstructing the microtubule pore

cancer biology more details view paper
  • Downloaded 287 times
  • Download rankings, all-time:
    • Site-wide: 98,311
    • In cancer biology: 2,952
  • Year to date:
    • Site-wide: 77,991
  • Since beginning of last month:
    • Site-wide: 31,555

A polygenic score-based approach to identify gene-drug interactions stratifying breast cancer risk

genetic and genomic medicine more details view paper
  • Downloaded 277 times
  • Download rankings, all-time:
    • Site-wide: 100,445
    • In genetic and genomic medicine: 463
  • Year to date:
    • Site-wide: 17,424
  • Since beginning of last month:
    • Site-wide: 24,279

Evolution of immune escape mechanisms in the progression from preinvasive to invasive human lung adenocarcinoma.

cancer biology more details view paper
  • Downloaded 263 times
  • Download rankings, all-time:
    • Site-wide: 103,850
    • In cancer biology: 3,125
  • Year to date:
    • Site-wide: 82,223
  • Since beginning of last month:
    • Site-wide: 70,216

Simple Linear Cancer Risk Prediction Models with Novel Features Outperform Complex Approaches

oncology more details view paper
  • Downloaded 230 times
  • Download rankings, all-time:
    • Site-wide: 111,886
    • In oncology: 258
  • Year to date:
    • Site-wide: 22,398
  • Since beginning of last month:
    • Site-wide: 102,109

High resolution mouse subventricular zone stem cell niche transcriptome reveals features of lineage, anatomy, and aging

neuroscience more details view paper
  • Downloaded 212 times
  • Download rankings, all-time:
    • Site-wide: 116,241
    • In neuroscience: 17,740
  • Year to date:
    • Site-wide: 85,054
  • Since beginning of last month:
    • Site-wide: 128,778

Systems Biology Analysis of Human Genomes Points to Key Pathways Conferring Spina Bifida Risk

genomics more details view paper
  • Downloaded 61 times
  • Download rankings, all-time:
    • Site-wide: 146,215
    • In genomics: 7,416
  • Year to date:
    • Site-wide: 84,082
  • Since beginning of last month:
    • Site-wide: 16,612

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