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Author: Ming Hu

Rankings

  • All-time downloads: 47,817 (rank: 2,751 )
  • Categories:
    • bioinformatics: 8,174 (rank: 1,024 )
    • cell biology: 134 (rank: 34,298 (tie) )
    • genetics: 12,531 (rank: 1,135 )
    • genomics: 10,355 (rank: 1,705 )
    • infectious diseases: 11,120 (rank: 3,701 (tie) )
    • molecular biology: 1,520 (rank: 3,122 (tie) )
    • neuroscience: 3,446 (rank: 5,552 (tie) )
    • systems biology: 537 (rank: 7,296 (tie) )

Downloads per author, site-wide

Preprints

Caution on Kidney Dysfunctions of 2019-nCoV Patients

infectious diseases more details view paper
  • Downloaded 11,120 times
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    • Site-wide: 641
    • In infectious diseases: 199
  • Year to date:
    • Site-wide: 3,243
  • Since beginning of last month:
    • Site-wide: 3,243

Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression

genetics more details view paper
  • Downloaded 9,361 times
  • Download rankings, all-time:
    • Site-wide: 812
    • In genetics: 25
  • Year to date:
    • Site-wide: 22,219
  • Since beginning of last month:
    • Site-wide: 22,219

The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions

bioinformatics more details view paper
  • Downloaded 2,908 times
  • Download rankings, all-time:
    • Site-wide: 4,000
    • In bioinformatics: 430
  • Year to date:
    • Site-wide: 66,605
  • Since beginning of last month:
    • Site-wide: 66,605

Histone H3 Lysine 4 methyltransferases MLL3 and MLL4 Modulate Long-range Chromatin Interactions at Enhancers

genomics more details view paper
  • Downloaded 2,529 times
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    • Site-wide: 4,899
    • In genomics: 571
  • Year to date:
    • Site-wide: 42,848
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    • Site-wide: 42,848

Using three-dimensional regulatory chromatin interactions from adult and fetal cortex to interpret genetic results for psychiatric disorders and cognitive traits

genetics more details view paper
  • Downloaded 2,154 times
  • Download rankings, all-time:
    • Site-wide: 6,210
    • In genetics: 307
  • Year to date:
    • Site-wide: 7,741
  • Since beginning of last month:
    • Site-wide: 7,741

HiCPlus: Resolution Enhancement of Hi-C interaction heatmap

bioinformatics more details view paper
  • Downloaded 2,135 times
  • Download rankings, all-time:
    • Site-wide: 6,303
    • In bioinformatics: 752
  • Year to date:
    • Site-wide: 83,879
  • Since beginning of last month:
    • Site-wide: 83,879

3D Epigenomic Characterization Reveals Insights Into Gene Regulation and Lineage Specification During Corticogenesis

genomics more details view paper
  • Downloaded 1,546 times
  • Download rankings, all-time:
    • Site-wide: 10,189
    • In genomics: 1,131
  • Year to date:
    • Site-wide: 25,495
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    • Site-wide: 25,495

CTCF Mediates Dosage and Sequence-context-dependent Transcriptional Insulation through Formation of Local Chromatin Domains

molecular biology more details view paper
  • Downloaded 1,520 times
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    • Site-wide: 10,466
    • In molecular biology: 289
  • Year to date:
    • Site-wide: 10,273
  • Since beginning of last month:
    • Site-wide: 10,273

CTCF Promotes Long-range Enhancer-promoter Interactions and Lineage-specific Gene Expression in Mammalian Cells

genomics more details view paper
  • Downloaded 1,515 times
  • Download rankings, all-time:
    • Site-wide: 10,527
    • In genomics: 1,170
  • Year to date:
    • Site-wide: 10,331
  • Since beginning of last month:
    • Site-wide: 10,331

Common DNA sequence variation influences 3-dimensional conformation of the human genome

genomics more details view paper
  • Downloaded 1,477 times
  • Download rankings, all-time:
    • Site-wide: 10,889
    • In genomics: 1,207
  • Year to date:
    • Site-wide: 108,830
  • Since beginning of last month:
    • Site-wide: 108,830

Removing unwanted variation between samples in Hi-C experiments

genomics more details view paper
  • Downloaded 1,286 times
  • Download rankings, all-time:
    • Site-wide: 13,419
    • In genomics: 1,460
  • Year to date:
    • Site-wide: 9,846
  • Since beginning of last month:
    • Site-wide: 9,846

Reliable sensory processing in mouse visual cortex through inhibitory interactions between Somatostatin and Parvalbumin interneurons

neuroscience more details view paper
  • Downloaded 1,267 times
  • Download rankings, all-time:
    • Site-wide: 13,718
    • In neuroscience: 1,635
  • Year to date:
    • Site-wide: 60,632
  • Since beginning of last month:
    • Site-wide: 60,632

Robust Hi-C chromatin loop maps in human neurogenesis and brain tissues at high-resolution

genomics more details view paper
  • Downloaded 1,232 times
  • Download rankings, all-time:
    • Site-wide: 14,323
    • In genomics: 1,521
  • Year to date:
    • Site-wide: 10,229
  • Since beginning of last month:
    • Site-wide: 10,229

MAPS: model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments

bioinformatics more details view paper
  • Downloaded 1,143 times
  • Download rankings, all-time:
    • Site-wide: 16,047
    • In bioinformatics: 1,971
  • Year to date:
    • Site-wide: 81,670
  • Since beginning of last month:
    • Site-wide: 81,670

HUGIn: Hi-C Unifying Genomic Interrogator

genetics more details view paper
  • Downloaded 730 times
  • Download rankings, all-time:
    • Site-wide: 30,553
    • In genetics: 1,520
  • Year to date:
    • Site-wide: 84,137
  • Since beginning of last month:
    • Site-wide: 84,137

In V4, pair-wise synchrony and correlations depend on the structure of the population code

neuroscience more details view paper
  • Downloaded 688 times
  • Download rankings, all-time:
    • Site-wide: 33,141
    • In neuroscience: 4,617
  • Year to date:
    • Site-wide: 63,052
  • Since beginning of last month:
    • Site-wide: 63,052

BAMM-SC: A Bayesian mixture model for clustering droplet-based single cell transcriptomic data from population studies

bioinformatics more details view paper
  • Downloaded 640 times
  • Download rankings, all-time:
    • Site-wide: 36,472
    • In bioinformatics: 4,056
  • Year to date:
    • Site-wide: 47,343
  • Since beginning of last month:
    • Site-wide: 47,343

TWO-SIGMA: a novel TWO-component SInGle cell Model-based Association method for single-cell RNA-seq data

genomics more details view paper
  • Downloaded 554 times
  • Download rankings, all-time:
    • Site-wide: 43,749
    • In genomics: 3,582
  • Year to date:
    • Site-wide: 47,791
  • Since beginning of last month:
    • Site-wide: 47,791

Integrative analyses of multi-tissue Hi-C and eQTL data demonstrate close spatial proximity between eQTLs and their target genes

systems biology more details view paper
  • Downloaded 537 times
  • Download rankings, all-time:
    • Site-wide: 45,447
    • In systems biology: 1,061
  • Year to date:
    • Site-wide: 81,884
  • Since beginning of last month:
    • Site-wide: 81,884

FIREcaller: Detecting Frequently Interacting Regions from Hi-C Data

bioinformatics more details view paper
  • Downloaded 515 times
  • Download rankings, all-time:
    • Site-wide: 47,753
    • In bioinformatics: 5,008
  • Year to date:
    • Site-wide: 47,759
  • Since beginning of last month:
    • Site-wide: 47,759

Label-free characterization of visual cortical areas in awake mice via three-photon microscopy reveals correlations between functional maps and structural substrates

neuroscience more details view paper
  • Downloaded 486 times
  • Download rankings, all-time:
    • Site-wide: 51,158
    • In neuroscience: 7,617
  • Year to date:
    • Site-wide: 102,618
  • Since beginning of last month:
    • Site-wide: 102,618

SnapHiC: a computational pipeline to map chromatin contacts from single cell Hi-C data

bioinformatics more details view paper
  • Downloaded 426 times
  • Download rankings, all-time:
    • Site-wide: 58,918
    • In bioinformatics: 5,882
  • Year to date:
    • Site-wide: 5,356
  • Since beginning of last month:
    • Site-wide: 5,356

Transcriptional Network Orchestrating Regional Patterning of Cortical Progenitors

neuroscience more details view paper
  • Downloaded 360 times
  • Download rankings, all-time:
    • Site-wide: 69,262
    • In neuroscience: 10,624
  • Year to date:
    • Site-wide: 24,752
  • Since beginning of last month:
    • Site-wide: 24,752

Choice can be predicted from populations of bursting neurons in superficial layers of monkey V1

neuroscience more details view paper
  • Downloaded 324 times
  • Download rankings, all-time:
    • Site-wide: 75,572
    • In neuroscience: 11,639
  • Year to date:
    • Site-wide: 87,715
  • Since beginning of last month:
    • Site-wide: 87,715

Reading-out task variables as a low-dimensional reconstruction of neural spike trains in single trials

neuroscience more details view paper
  • Downloaded 321 times
  • Download rankings, all-time:
    • Site-wide: 76,002
    • In neuroscience: 11,736
  • Year to date:
    • Site-wide: 120,256
  • Since beginning of last month:
    • Site-wide: 120,256

THUNDER: A reference-free deconvolution method to infer cell type proportions from bulk Hi-C data

bioinformatics more details view paper
  • Downloaded 219 times
  • Download rankings, all-time:
    • Site-wide: 97,353
    • In bioinformatics: 8,426
  • Year to date:
    • Site-wide: 31,628
  • Since beginning of last month:
    • Site-wide: 31,628

HiC-ACT: Improved Detection of Chromatin Interactions from Hi-C Data via Aggregated Cauchy Test

bioinformatics more details view paper
  • Downloaded 188 times
  • Download rankings, all-time:
    • Site-wide: 104,114
    • In bioinformatics: 8,820
  • Year to date:
    • Site-wide: 33,368
  • Since beginning of last month:
    • Site-wide: 33,368

Sexually dimorphic roles for the type 2 diabetes-associated C2cd4b gene in murine glucose homeostasis

genetics more details view paper
  • Downloaded 160 times
  • Download rankings, all-time:
    • Site-wide: 109,617
    • In genetics: 4,850
  • Year to date:
    • Site-wide: 68,888
  • Since beginning of last month:
    • Site-wide: 68,888

Chromatin 3D interaction analysis of the STARD10 locus unveils FCHSD2 as a new regulator of insulin secretion

cell biology more details view paper
  • Downloaded 134 times
  • Download rankings, all-time:
    • Site-wide: 114,691
    • In cell biology: 5,310
  • Year to date:
    • Site-wide: 46,801
  • Since beginning of last month:
    • Site-wide: 46,801

TWO-SIGMA-G: A New Competitive Gene Set Testing Framework for scRNA-seq Data Accounting for Inter-Gene and Cell-Cell Correlation

genomics more details view paper
  • Downloaded 131 times
  • Download rankings, all-time:
    • Site-wide: 115,138
    • In genomics: 6,404
  • Year to date:
    • Site-wide: 7,530
  • Since beginning of last month:
    • Site-wide: 7,530

MUNIn (Multiple cell-type UNifying long-range chromatin Interaction detector): a statistical framework for identifying long-range chromatin interactions from multiple cell types

genetics more details view paper
  • Downloaded 126 times
  • Download rankings, all-time:
    • Site-wide: 116,021
    • In genetics: 5,050
  • Year to date:
    • Site-wide: 76,622
  • Since beginning of last month:
    • Site-wide: 76,622

HPRep: Quantifying reproducibility in HiChIP and PLAC-seq datasets

genomics more details view paper
  • Downloaded 85 times
  • Download rankings, all-time:
    • Site-wide: 122,992
    • In genomics: 6,623
  • Year to date:
    • Site-wide: 57,595
  • Since beginning of last month:
    • Site-wide: 57,595

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