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Author: Ming Hu

Rankings

  • All-time downloads: 54,902 (rank: 3,463 (tie) )
  • Categories:
    • bioinformatics: 9,177 (rank: 1,112 (tie) )
    • cell biology: 176 (rank: 40,989 (tie) )
    • genetics: 13,437 (rank: 1,158 )
    • genomics: 13,101 (rank: 1,500 )
    • infectious diseases: 12,259 (rank: 4,831 (tie) )
    • molecular biology: 2,011 (rank: 2,897 (tie) )
    • neuroscience: 4,152 (rank: 5,758 (tie) )
    • systems biology: 589 (rank: 8,367 (tie) )

Downloads per author, site-wide

Preprints

Caution on Kidney Dysfunctions of 2019-nCoV Patients

infectious diseases more details view paper
  • Downloaded 12,259 times
  • Download rankings, all-time:
    • Site-wide: 793
    • In infectious diseases: 262
  • Year to date:
    • Site-wide: 2,764
  • Since beginning of last month:
    • Site-wide: 5,379

Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression

genetics more details view paper
  • Downloaded 9,502 times
  • Download rankings, all-time:
    • Site-wide: 1,110
    • In genetics: 26
  • Year to date:
    • Site-wide: 45,127
  • Since beginning of last month:
    • Site-wide: 37,119

The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions

bioinformatics more details view paper
  • Downloaded 3,038 times
  • Download rankings, all-time:
    • Site-wide: 5,123
    • In bioinformatics: 491
  • Year to date:
    • Site-wide: 60,952
  • Since beginning of last month:
    • Site-wide: 43,750

Histone H3 Lysine 4 methyltransferases MLL3 and MLL4 Modulate Long-range Chromatin Interactions at Enhancers

genomics more details view paper
  • Downloaded 2,616 times
  • Download rankings, all-time:
    • Site-wide: 6,378
    • In genomics: 651
  • Year to date:
    • Site-wide: 77,694
  • Since beginning of last month:
    • Site-wide: 99,958

Using three-dimensional regulatory chromatin interactions from adult and fetal cortex to interpret genetic results for psychiatric disorders and cognitive traits

genetics more details view paper
  • Downloaded 2,550 times
  • Download rankings, all-time:
    • Site-wide: 6,621
    • In genetics: 274
  • Year to date:
    • Site-wide: 11,475
  • Since beginning of last month:
    • Site-wide: 21,411

HiCPlus: Resolution Enhancement of Hi-C interaction heatmap

bioinformatics more details view paper
  • Downloaded 2,209 times
  • Download rankings, all-time:
    • Site-wide: 8,159
    • In bioinformatics: 912
  • Year to date:
    • Site-wide: 98,079
  • Since beginning of last month:
    • Site-wide: 72,221

CTCF Mediates Dosage and Sequence-context-dependent Transcriptional Insulation through Formation of Local Chromatin Domains

molecular biology more details view paper
  • Downloaded 2,011 times
  • Download rankings, all-time:
    • Site-wide: 9,338
    • In molecular biology: 231
  • Year to date:
    • Site-wide: 9,531
  • Since beginning of last month:
    • Site-wide: 24,130

3D Epigenomic Characterization Reveals Insights Into Gene Regulation and Lineage Specification During Corticogenesis

genomics more details view paper
  • Downloaded 1,952 times
  • Download rankings, all-time:
    • Site-wide: 9,731
    • In genomics: 973
  • Year to date:
    • Site-wide: 14,281
  • Since beginning of last month:
    • Site-wide: 20,854

CTCF Promotes Long-range Enhancer-promoter Interactions and Lineage-specific Gene Expression in Mammalian Cells

genomics more details view paper
  • Downloaded 1,829 times
  • Download rankings, all-time:
    • Site-wide: 10,766
    • In genomics: 1,080
  • Year to date:
    • Site-wide: 16,164
  • Since beginning of last month:
    • Site-wide: 28,141

Removing unwanted variation between samples in Hi-C experiments

genomics more details view paper
  • Downloaded 1,593 times
  • Download rankings, all-time:
    • Site-wide: 13,146
    • In genomics: 1,321
  • Year to date:
    • Site-wide: 16,316
  • Since beginning of last month:
    • Site-wide: 10,696

Common DNA sequence variation influences 3-dimensional conformation of the human genome

genomics more details view paper
  • Downloaded 1,513 times
  • Download rankings, all-time:
    • Site-wide: 14,210
    • In genomics: 1,420
  • Year to date:
    • Site-wide: 142,692
  • Since beginning of last month:
    • Site-wide: 124,303

Robust Hi-C chromatin loop maps in human neurogenesis and brain tissues at high-resolution

genomics more details view paper
  • Downloaded 1,495 times
  • Download rankings, all-time:
    • Site-wide: 14,498
    • In genomics: 1,441
  • Year to date:
    • Site-wide: 19,596
  • Since beginning of last month:
    • Site-wide: 22,211

Reliable sensory processing in mouse visual cortex through inhibitory interactions between Somatostatin and Parvalbumin interneurons

neuroscience more details view paper
  • Downloaded 1,443 times
  • Download rankings, all-time:
    • Site-wide: 15,319
    • In neuroscience: 1,730
  • Year to date:
    • Site-wide: 44,659
  • Since beginning of last month:
    • Site-wide: 30,541

MAPS: model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments

bioinformatics more details view paper
  • Downloaded 1,208 times
  • Download rankings, all-time:
    • Site-wide: 20,013
    • In bioinformatics: 2,285
  • Year to date:
    • Site-wide: 104,954
  • Since beginning of last month:
    • Site-wide: 127,809

Parallel Characterization of cis-Regulatory Elements for Multiple Genes Using CRISPRpath

genomics more details view paper
  • Downloaded 867 times
  • Download rankings, all-time:
    • Site-wide: 32,524
    • In genomics: 2,784
  • Year to date:
    • Site-wide: 5,365
  • Since beginning of last month:
    • Site-wide: 3,634

SnapHiC: a computational pipeline to map chromatin contacts from single cell Hi-C data

bioinformatics more details view paper
  • Downloaded 788 times
  • Download rankings, all-time:
    • Site-wide: 37,254
    • In bioinformatics: 4,005
  • Year to date:
    • Site-wide: 11,279
  • Since beginning of last month:
    • Site-wide: 36,751

HUGIn: Hi-C Unifying Genomic Interrogator

genetics more details view paper
  • Downloaded 749 times
  • Download rankings, all-time:
    • Site-wide: 39,997
    • In genetics: 1,762
  • Year to date:
    • Site-wide: 154,106
  • Since beginning of last month:
    • Site-wide: 157,036

In V4, pair-wise synchrony and correlations depend on the structure of the population code

neuroscience more details view paper
  • Downloaded 747 times
  • Download rankings, all-time:
    • Site-wide: 40,121
    • In neuroscience: 5,413
  • Year to date:
    • Site-wide: 106,068
  • Since beginning of last month:
    • Site-wide: 146,023

TWO-SIGMA: a novel TWO-component SInGle cell Model-based Association method for single-cell RNA-seq data

genomics more details view paper
  • Downloaded 712 times
  • Download rankings, all-time:
    • Site-wide: 42,883
    • In genomics: 3,420
  • Year to date:
    • Site-wide: 48,142
  • Since beginning of last month:
    • Site-wide: 56,722

BAMM-SC: A Bayesian mixture model for clustering droplet-based single cell transcriptomic data from population studies

bioinformatics more details view paper
  • Downloaded 690 times
  • Download rankings, all-time:
    • Site-wide: 44,662
    • In bioinformatics: 4,684
  • Year to date:
    • Site-wide: 107,650
  • Since beginning of last month:
    • Site-wide: 128,073

Integrative analyses of multi-tissue Hi-C and eQTL data demonstrate close spatial proximity between eQTLs and their target genes

systems biology more details view paper
  • Downloaded 589 times
  • Download rankings, all-time:
    • Site-wide: 54,926
    • In systems biology: 1,200
  • Year to date:
    • Site-wide: 117,812
  • Since beginning of last month:
    • Site-wide: 100,538

FIREcaller: Detecting Frequently Interacting Regions from Hi-C Data

bioinformatics more details view paper
  • Downloaded 568 times
  • Download rankings, all-time:
    • Site-wide: 57,462
    • In bioinformatics: 5,702
  • Year to date:
    • Site-wide: 104,731
  • Since beginning of last month:
    • Site-wide: 127,568

Label-free characterization of visual cortical areas in awake mice via three-photon microscopy reveals correlations between functional maps and structural substrates

neuroscience more details view paper
  • Downloaded 555 times
  • Download rankings, all-time:
    • Site-wide: 59,069
    • In neuroscience: 8,452
  • Year to date:
    • Site-wide: 105,274
  • Since beginning of last month:
    • Site-wide: 123,245

Choice can be predicted from populations of bursting neurons in superficial layers of monkey V1

neuroscience more details view paper
  • Downloaded 542 times
  • Download rankings, all-time:
    • Site-wide: 60,666
    • In neuroscience: 8,724
  • Year to date:
    • Site-wide: 36,858
  • Since beginning of last month:
    • Site-wide: 11,531

Transcriptional Network Orchestrating Regional Patterning of Cortical Progenitors

neuroscience more details view paper
  • Downloaded 518 times
  • Download rankings, all-time:
    • Site-wide: 63,981
    • In neuroscience: 9,265
  • Year to date:
    • Site-wide: 42,127
  • Since beginning of last month:
    • Site-wide: 34,251

THUNDER: A reference-free deconvolution method to infer cell type proportions from bulk Hi-C data

bioinformatics more details view paper
  • Downloaded 393 times
  • Download rankings, all-time:
    • Site-wide: 85,587
    • In bioinformatics: 7,668
  • Year to date:
    • Site-wide: 40,724
  • Since beginning of last month:
    • Site-wide: 8,110

Reading-out task variables as a low-dimensional reconstruction of neural spike trains in single trials

neuroscience more details view paper
  • Downloaded 347 times
  • Download rankings, all-time:
    • Site-wide: 95,395
    • In neuroscience: 14,152
  • Year to date:
    • Site-wide: 154,899
  • Since beginning of last month:
    • Site-wide: 157,206

TWO-SIGMA-G: A New Competitive Gene Set Testing Framework for scRNA-seq Data Accounting for Inter-Gene and Cell-Cell Correlation

genomics more details view paper
  • Downloaded 316 times
  • Download rankings, all-time:
    • Site-wide: 102,697
    • In genomics: 6,171
  • Year to date:
    • Site-wide: 24,163
  • Since beginning of last month:
    • Site-wide: 17,526

HiC-ACT: Improved Detection of Chromatin Interactions from Hi-C Data via Aggregated Cauchy Test

bioinformatics more details view paper
  • Downloaded 283 times
  • Download rankings, all-time:
    • Site-wide: 110,879
    • In bioinformatics: 9,252
  • Year to date:
    • Site-wide: 68,954
  • Since beginning of last month:
    • Site-wide: 88,422

MUNIn (Multiple sample UNifying long-range chromatin Interaction detector): a statistical framework for identifying long-range chromatin interactions from multiple samples

genetics more details view paper
  • Downloaded 224 times
  • Download rankings, all-time:
    • Site-wide: 126,201
    • In genetics: 5,141
  • Year to date:
    • Site-wide: 78,813
  • Since beginning of last month:
    • Site-wide: 64,282

Super interactive promoters provide insight into cell type-specific regulatory networks in blood lineage cell types

genetics more details view paper
  • Downloaded 216 times
  • Download rankings, all-time:
    • Site-wide: 128,293
    • In genetics: 5,197
  • Year to date:
    • Site-wide: 39,783
  • Since beginning of last month:
    • Site-wide: 56,083

HPRep: Quantifying reproducibility in HiChIP and PLAC-seq datasets

genomics more details view paper
  • Downloaded 208 times
  • Download rankings, all-time:
    • Site-wide: 130,374
    • In genomics: 7,039
  • Year to date:
    • Site-wide: 62,975
  • Since beginning of last month:
    • Site-wide: 33,690

Sexually dimorphic roles for the type 2 diabetes-associated C2cd4b gene in murine glucose homeostasis

genetics more details view paper
  • Downloaded 196 times
  • Download rankings, all-time:
    • Site-wide: 133,353
    • In genetics: 5,375
  • Year to date:
    • Site-wide: 131,865
  • Since beginning of last month:
    • Site-wide: 131,964

Chromatin 3D interaction analysis of the STARD10 locus unveils FCHSD2 as a new regulator of insulin secretion

cell biology more details view paper
  • Downloaded 176 times
  • Download rankings, all-time:
    • Site-wide: 138,202
    • In cell biology: 6,392
  • Year to date:
    • Site-wide: 115,543
  • Since beginning of last month:
    • Site-wide: 102,484

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