Author: Ming Hu

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Preprints

Sexually dimorphic roles for the type 2 diabetes-associated C2cd4b gene in murine glucose homeostasis

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Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression

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The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions

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Histone H3 Lysine 4 methyltransferases MLL3 and MLL4 Modulate Long-range Chromatin Interactions at Enhancers

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HiCPlus: Resolution Enhancement of Hi-C interaction heatmap

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Using three-dimensional regulatory chromatin interactions from adult and fetal cortex to interpret genetic results for psychiatric disorders and cognitive traits

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Common DNA sequence variation influences 3-dimensional conformation of the human genome

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Reliable sensory processing in mouse visual cortex through inhibitory interactions between Somatostatin and Parvalbumin interneurons

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MAPS: model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments

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Removing unwanted variation between samples in Hi-C experiments

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3D Epigenomic Characterization Reveals Insights Into Gene Regulation and Lineage Specification During Corticogenesis

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Robust Hi-C chromatin loop maps in human neurogenesis and brain tissues at high-resolution

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CTCF Promotes Long-range Enhancer-promoter Interactions and Lineage-specific Gene Expression in Mammalian Cells

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HUGIn: Hi-C Unifying Genomic Interrogator

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BAMM-SC: A Bayesian mixture model for clustering droplet-based single cell transcriptomic data from population studies

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In V4, pair-wise synchrony and correlations depend on the structure of the population code

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Integrative analyses of multi-tissue Hi-C and eQTL data demonstrate close spatial proximity between eQTLs and their target genes

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TWO-SIGMA: a novel TWO-component SInGle cell Model-based Association method for single-cell RNA-seq data

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Label-free characterization of visual cortical areas in awake mice via three-photon microscopy reveals correlations between functional maps and structural substrates

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FIREcaller: an R package for detecting frequently interacting regions from Hi-C data

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Reading-out task variables as a low-dimensional reconstruction of neural spike trains in single trials

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The intersection between the representation of the stimuli and the choice by neural ensembles in the primary visual cortex of the macaque.

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Chromatin 3D interaction analysis of the STARD10 locus unveils FCHSD2 as a new regulator of insulin secretion

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