Rxivist logo

Author: Ming Hu

Rankings

  • All-time downloads: 66,288 (rank: 3,622 )
  • Categories:
    • bioinformatics: 10,356 (rank: 1,191 )
    • cell biology: 238 (rank: 48,436 (tie) )
    • developmental biology: 883 (rank: 8,256 (tie) )
    • genetics: 14,366 (rank: 1,266 )
    • genomics: 15,087 (rank: 1,434 )
    • infectious diseases: 13,175 (rank: 5,807 (tie) )
    • molecular biology: 2,180 (rank: 3,338 (tie) )
    • neuroscience: 7,475 (rank: 3,345 )
    • systems biology: 660 (rank: 9,534 (tie) )

Downloads per author, site-wide

Preprints

Caution on Kidney Dysfunctions of 2019-nCoV Patients

infectious diseases more details view paper
  • Downloaded 13,332 times
  • Download rankings, all-time:
    • Site-wide: 939
    • In infectious diseases: 310
  • Year to date:
    • Site-wide: 5,694
  • Since beginning of last month:
    • Site-wide: 8,998

Genome-wide association analyses identify 44 risk variants and refine the genetic architecture of major depression

genetics more details view paper
  • Downloaded 9,791 times
  • Download rankings, all-time:
    • Site-wide: 1,376
    • In genetics: 27
  • Year to date:
    • Site-wide: 39,599
  • Since beginning of last month:
    • Site-wide: 24,738

Using three-dimensional regulatory chromatin interactions from adult and fetal cortex to interpret genetic results for psychiatric disorders and cognitive traits

genetics more details view paper
  • Downloaded 3,186 times
  • Download rankings, all-time:
    • Site-wide: 6,531
    • In genetics: 246
  • Year to date:
    • Site-wide: 10,839
  • Since beginning of last month:
    • Site-wide: 8,232

The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions

bioinformatics more details view paper
  • Downloaded 3,153 times
  • Download rankings, all-time:
    • Site-wide: 6,632
    • In bioinformatics: 592
  • Year to date:
    • Site-wide: 94,677
  • Since beginning of last month:
    • Site-wide: 96,119

Histone H3 Lysine 4 methyltransferases MLL3 and MLL4 Modulate Long-range Chromatin Interactions at Enhancers

genomics more details view paper
  • Downloaded 2,734 times
  • Download rankings, all-time:
    • Site-wide: 8,112
    • In genomics: 745
  • Year to date:
    • Site-wide: 122,676
  • Since beginning of last month:
    • Site-wide: 49,332

3D Epigenomic Characterization Reveals Insights Into Gene Regulation and Lineage Specification During Corticogenesis

genomics more details view paper
  • Downloaded 2,414 times
  • Download rankings, all-time:
    • Site-wide: 9,769
    • In genomics: 944
  • Year to date:
    • Site-wide: 19,427
  • Since beginning of last month:
    • Site-wide: 15,547

HiCPlus: Resolution Enhancement of Hi-C interaction heatmap

bioinformatics more details view paper
  • Downloaded 2,315 times
  • Download rankings, all-time:
    • Site-wide: 10,427
    • In bioinformatics: 1,062
  • Year to date:
    • Site-wide: 124,848
  • Since beginning of last month:
    • Site-wide: 69,770

CTCF Mediates Dosage and Sequence-context-dependent Transcriptional Insulation through Formation of Local Chromatin Domains

molecular biology more details view paper
  • Downloaded 2,205 times
  • Download rankings, all-time:
    • Site-wide: 11,212
    • In molecular biology: 249
  • Year to date:
    • Site-wide: 71,421
  • Since beginning of last month:
    • Site-wide: 102,938

Removing unwanted variation between samples in Hi-C experiments

genomics more details view paper
  • Downloaded 2,080 times
  • Download rankings, all-time:
    • Site-wide: 12,259
    • In genomics: 1,118
  • Year to date:
    • Site-wide: 13,647
  • Since beginning of last month:
    • Site-wide: 30,221

CTCF Promotes Long-range Enhancer-promoter Interactions and Lineage-specific Gene Expression in Mammalian Cells

genomics more details view paper
  • Downloaded 2,049 times
  • Download rankings, all-time:
    • Site-wide: 12,524
    • In genomics: 1,144
  • Year to date:
    • Site-wide: 58,497
  • Since beginning of last month:
    • Site-wide: 23,005

Long-term labeling and imaging of synaptically-connected neuronal networks in vivo using nontoxic, double-deletion-mutant rabies viruses

neuroscience more details view paper
  • Downloaded 1,925 times
  • Download rankings, all-time:
    • Site-wide: 13,781
    • In neuroscience: 1,406
  • Year to date:
    • Site-wide: 9,563
  • Since beginning of last month:
    • Site-wide: 26,984

Robust Hi-C chromatin loop maps in human neurogenesis and brain tissues at high-resolution

genomics more details view paper
  • Downloaded 1,690 times
  • Download rankings, all-time:
    • Site-wide: 16,772
    • In genomics: 1,513
  • Year to date:
    • Site-wide: 68,246
  • Since beginning of last month:
    • Site-wide: 37,130

Reliable sensory processing in mouse visual cortex through inhibitory interactions between Somatostatin and Parvalbumin interneurons

neuroscience more details view paper
  • Downloaded 1,652 times
  • Download rankings, all-time:
    • Site-wide: 17,416
    • In neuroscience: 1,928
  • Year to date:
    • Site-wide: 64,725
  • Since beginning of last month:
    • Site-wide: 44,254

Common DNA sequence variation influences 3-dimensional conformation of the human genome

genomics more details view paper
  • Downloaded 1,581 times
  • Download rankings, all-time:
    • Site-wide: 18,650
    • In genomics: 1,633
  • Year to date:
    • Site-wide: 180,245
  • Since beginning of last month:
    • Site-wide: 124,801

MAPS: model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments

bioinformatics more details view paper
  • Downloaded 1,405 times
  • Download rankings, all-time:
    • Site-wide: 22,534
    • In bioinformatics: 2,412
  • Year to date:
    • Site-wide: 84,326
  • Since beginning of last month:
    • Site-wide: 68,267

Parallel Characterization of cis-Regulatory Elements for Multiple Genes Using CRISPRpath

genomics more details view paper
  • Downloaded 1,149 times
  • Download rankings, all-time:
    • Site-wide: 30,996
    • In genomics: 2,544
  • Year to date:
    • Site-wide: 38,951
  • Since beginning of last month:
    • Site-wide: 85,322

Integrative analysis of the 3D genome and epigenome in mouse embryonic tissues

developmental biology more details view paper
  • Downloaded 978 times
  • Download rankings, all-time:
    • Site-wide: 39,668
    • In developmental biology: 884
  • Year to date:
    • Site-wide: 3,501
  • Since beginning of last month:
    • Site-wide: 17,221

SnapHiC: a computational pipeline to map chromatin contacts from single cell Hi-C data

bioinformatics more details view paper
  • Downloaded 925 times
  • Download rankings, all-time:
    • Site-wide: 43,182
    • In bioinformatics: 4,363
  • Year to date:
    • Site-wide: 106,892
  • Since beginning of last month:
    • Site-wide: 175,429

TWO-SIGMA: a novel TWO-component SInGle cell Model-based Association method for single-cell RNA-seq data

genomics more details view paper
  • Downloaded 891 times
  • Download rankings, all-time:
    • Site-wide: 45,668
    • In genomics: 3,419
  • Year to date:
    • Site-wide: 93,283
  • Since beginning of last month:
    • Site-wide: 129,134

In V4, pair-wise synchrony and correlations depend on the structure of the population code

neuroscience more details view paper
  • Downloaded 866 times
  • Download rankings, all-time:
    • Site-wide: 47,770
    • In neuroscience: 6,232
  • Year to date:
    • Site-wide: 122,550
  • Since beginning of last month:
    • Site-wide: 49,464

Learning from invariants predicts upcoming behavioral choice from spiking activity in monkey V1

neuroscience more details view paper
  • Downloaded 818 times
  • Download rankings, all-time:
    • Site-wide: 52,056
    • In neuroscience: 6,849
  • Year to date:
    • Site-wide: 44,066
  • Since beginning of last month:
    • Site-wide: 141,708

Cellular and Circuit Organization of the Locus Coeruleus of Adult Mice

neuroscience more details view paper
  • Downloaded 802 times
  • Download rankings, all-time:
    • Site-wide: 53,549
    • In neuroscience: 8,855
  • Year to date:
    • Site-wide: 4,845
  • Since beginning of last month:
    • Site-wide: 11,775

HUGIn: Hi-C Unifying Genomic Interrogator

genetics more details view paper
  • Downloaded 796 times
  • Download rankings, all-time:
    • Site-wide: 54,237
    • In genetics: 2,087
  • Year to date:
    • Site-wide: 194,627
  • Since beginning of last month:
    • Site-wide: 148,357

BAMM-SC: A Bayesian mixture model for clustering droplet-based single cell transcriptomic data from population studies

bioinformatics more details view paper
  • Downloaded 778 times
  • Download rankings, all-time:
    • Site-wide: 56,026
    • In bioinformatics: 5,398
  • Year to date:
    • Site-wide: 153,221
  • Since beginning of last month:
    • Site-wide: 107,517

Integrative analyses of multi-tissue Hi-C and eQTL data demonstrate close spatial proximity between eQTLs and their target genes

systems biology more details view paper
  • Downloaded 679 times
  • Download rankings, all-time:
    • Site-wide: 68,130
    • In systems biology: 1,339
  • Year to date:
    • Site-wide: 150,530
  • Since beginning of last month:
    • Site-wide: 149,803

TWO-SIGMA-G: A New Competitive Gene Set Testing Framework for scRNA-seq Data Accounting for Inter-Gene and Cell-Cell Correlation

genomics more details view paper
  • Downloaded 657 times
  • Download rankings, all-time:
    • Site-wide: 71,345
    • In genomics: 4,831
  • Year to date:
    • Site-wide: 29,228
  • Since beginning of last month:
    • Site-wide: 56,553

FIREcaller: Detecting Frequently Interacting Regions from Hi-C Data

bioinformatics more details view paper
  • Downloaded 656 times
  • Download rankings, all-time:
    • Site-wide: 71,440
    • In bioinformatics: 6,589
  • Year to date:
    • Site-wide: 160,159
  • Since beginning of last month:
    • Site-wide: 127,083

Transcriptional Network Orchestrating Regional Patterning of Cortical Progenitors

neuroscience more details view paper
  • Downloaded 654 times
  • Download rankings, all-time:
    • Site-wide: 71,715
    • In neuroscience: 9,733
  • Year to date:
    • Site-wide: 139,579
  • Since beginning of last month:
    • Site-wide: 185,606

Label-free characterization of visual cortical areas in awake mice via three-photon microscopy reveals correlations between functional maps and structural substrates

neuroscience more details view paper
  • Downloaded 635 times
  • Download rankings, all-time:
    • Site-wide: 74,665
    • In neuroscience: 10,297
  • Year to date:
    • Site-wide: 178,092
  • Since beginning of last month:
    • Site-wide: 139,145

A Network-based Deep Learning Framework Catalyzes GWAS and Multi-Omics Findings to Biology and Drug Repurposing for Alzheimer's Disease

bioinformatics more details view paper
  • Downloaded 551 times
  • Download rankings, all-time:
    • Site-wide: 89,269
    • In bioinformatics: 8,519
  • Year to date:
    • Site-wide: 32,585
  • Since beginning of last month:
    • Site-wide: 33,534

THUNDER: A reference-free deconvolution method to infer cell type proportions from bulk Hi-C data

bioinformatics more details view paper
  • Downloaded 486 times
  • Download rankings, all-time:
    • Site-wide: 103,120
    • In bioinformatics: 8,607
  • Year to date:
    • Site-wide: 151,262
  • Since beginning of last month:
    • Site-wide: 182,089

Reading-out task variables as a low-dimensional reconstruction of neural spike trains in single trials

neuroscience more details view paper
  • Downloaded 447 times
  • Download rankings, all-time:
    • Site-wide: 112,380
    • In neuroscience: 15,894
  • Year to date:
    • Site-wide: 167,182
  • Since beginning of last month:
    • Site-wide: 198,860

HiC-ACT: Improved Detection of Chromatin Interactions from Hi-C Data via Aggregated Cauchy Test

bioinformatics more details view paper
  • Downloaded 376 times
  • Download rankings, all-time:
    • Site-wide: 131,753
    • In bioinformatics: 10,409
  • Year to date:
    • Site-wide: 178,304
  • Since beginning of last month:
    • Site-wide: 178,852

Super interactive promoters provide insight into cell type-specific regulatory networks in blood lineage cell types

genetics more details view paper
  • Downloaded 338 times
  • Download rankings, all-time:
    • Site-wide: 142,912
    • In genetics: 5,224
  • Year to date:
    • Site-wide: 120,273
  • Since beginning of last month:
    • Site-wide: 191,594

MUNIn (Multiple sample UNifying long-range chromatin Interaction detector): a statistical framework for identifying long-range chromatin interactions from multiple samples

genetics more details view paper
  • Downloaded 301 times
  • Download rankings, all-time:
    • Site-wide: 154,022
    • In genetics: 5,697
  • Year to date:
    • Site-wide: 175,002
  • Since beginning of last month:
    • Site-wide: 119,271

HPRep: Quantifying reproducibility in HiChIP and PLAC-seq datasets

genomics more details view paper
  • Downloaded 274 times
  • Download rankings, all-time:
    • Site-wide: 161,970
    • In genomics: 8,015
  • Year to date:
    • Site-wide: 200,587
  • Since beginning of last month:
    • Site-wide: 182,395

Chromatin 3D interaction analysis of the STARD10 locus unveils FCHSD2 as a new regulator of insulin secretion

cell biology more details view paper
  • Downloaded 268 times
  • Download rankings, all-time:
    • Site-wide: 163,775
    • In cell biology: 7,556
  • Year to date:
    • Site-wide: 143,568
  • Since beginning of last month:
    • Site-wide: 59,151

Sexually dimorphic roles for the type 2 diabetes-associated C2cd4b gene in murine glucose homeostasis

genetics more details view paper
  • Downloaded 258 times
  • Download rankings, all-time:
    • Site-wide: 166,359
    • In genetics: 6,044
  • Year to date:
    • Site-wide: 151,918
  • Since beginning of last month:
    • Site-wide: 143,665

SnapHiC-D: a computational pipeline to identify differential chromatin contacts from single cell Hi-C data

bioinformatics more details view paper
  • Downloaded 193 times
  • Download rankings, all-time:
    • Site-wide: 183,297
    • In bioinformatics: None
  • Year to date:
    • Site-wide: 47,025
  • Since beginning of last month:
    • Site-wide: 36,274

PanLingua

News