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Author: Michael Q. Zhang

Rankings

  • All-time downloads: 15,830 (rank: 20,361 (tie) )
  • Categories:
    • bioinformatics: 3,206 (rank: 6,161 (tie) )
    • cancer biology: 1,288 (rank: 10,658 (tie) )
    • cell biology: 2,702 (rank: 3,535 (tie) )
    • genomics: 3,331 (rank: 9,694 (tie) )
    • microbiology: 833 (rank: 28,081 (tie) )
    • neuroscience: 2,409 (rank: 14,679 (tie) )
    • oncology: 312 (rank: 6,194 (tie) )
    • systems biology: 1,295 (rank: 4,955 (tie) )

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Preprints

Accurate prediction of cohesin-mediated 3D genome organization from 2D chromatin features

genomics more details view paper

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Comparative transcriptome profiling of the human and mouse dorsal root ganglia: An RNA-seq-based resource for pain and sensory neuroscience research

neuroscience more details view paper
  • Downloaded 2,451 times
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    • Site-wide: 9,552
    • In neuroscience: 874
  • Year to date:
    • Site-wide: 69,714
  • Since beginning of last month:
    • Site-wide: 45,160

Imaging chromatin interactions at sub-kilobase resolution Via Tn5-FISH

cell biology more details view paper
  • Downloaded 1,155 times
  • Download rankings, all-time:
    • Site-wide: 30,682
    • In cell biology: 1,092
  • Year to date:
    • Site-wide: 114,412
  • Since beginning of last month:
    • Site-wide: 127,804

Quantitative understanding of molecular competition as a hidden layer of gene regulatory network

systems biology more details view paper
  • Downloaded 1,052 times
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    • Site-wide: 35,452
    • In systems biology: 641
  • Year to date:
    • Site-wide: 179,695
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    • Site-wide: 125,414

Quantifying phase separation property of chromatin associated proteins under physiological conditions using anti-1,6-hexanediol index

cell biology more details view paper
  • Downloaded 1,047 times
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    • Site-wide: 35,684
    • In cell biology: 1,363
  • Year to date:
    • Site-wide: 58,941
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    • Site-wide: 56,811

3D Genome Analysis Identifies Enhancer Hijacking Mechanism for High-Risk Factors in Human T-Lineage Acute Lymphoblastic Leukemia

genomics more details view paper
  • Downloaded 1,044 times
  • Download rankings, all-time:
    • Site-wide: 35,880
    • In genomics: 2,830
  • Year to date:
    • Site-wide: 95,183
  • Since beginning of last month:
    • Site-wide: 74,739

Integrating Hi-C and FISH data for modeling 3D organizations of chromosomes

bioinformatics more details view paper
  • Downloaded 1,020 times
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    • Site-wide: 37,121
    • In bioinformatics: 3,764
  • Year to date:
    • Site-wide: 203,493
  • Since beginning of last month:
    • Site-wide: 147,768

MyoD is a structure organizer of 3D genome architecture in muscle cells

genomics more details view paper
  • Downloaded 994 times
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    • Site-wide: 38,610
    • In genomics: 2,969
  • Year to date:
    • Site-wide: 74,698
  • Since beginning of last month:
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MarkovHC: Markov hierarchical clustering for the topological structure of high-dimensional single-cell omics data

bioinformatics more details view paper
  • Downloaded 928 times
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    • Site-wide: 42,978
    • In bioinformatics: 4,326
  • Year to date:
    • Site-wide: 106,406
  • Since beginning of last month:
    • Site-wide: 143,902

Deep sequencing analysis of CRISPR-escaping plasmid transconjugants in Enterococcus faecalis

microbiology more details view paper
  • Downloaded 859 times
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    • Site-wide: 48,387
    • In microbiology: 2,793
  • Year to date:
    • Site-wide: 92,262
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    • Site-wide: 61,273

SCT promoter methylation is a highly discriminative biomarker for lung and many other cancers

cancer biology more details view paper
  • Downloaded 828 times
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    • Site-wide: 51,132
    • In cancer biology: 1,420
  • Year to date:
    • Site-wide: 159,986
  • Since beginning of last month:
    • Site-wide: 90,280

Recurrently deregulated lncRNAs associated with HCC tumorigenesis and metastasis revealed by genomic, epigenomic and transcriptomic profiling in paired primary tumor and PVTT samples

genomics more details view paper
  • Downloaded 825 times
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    • Site-wide: 51,392
    • In genomics: 3,669
  • Year to date:
    • Site-wide: 203,719
  • Since beginning of last month:
    • Site-wide: 187,374

SuperCT: A supervised-learning-framework to enhance the characterization of single-cell transcriptomic profiles

bioinformatics more details view paper
  • Downloaded 765 times
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    • Site-wide: 57,372
    • In bioinformatics: 5,445
  • Year to date:
    • Site-wide: 160,656
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    • Site-wide: 131,261

Lipid rafts increase to facilitate ectoderm lineage specification of differentiating embryonic stem cells

cell biology more details view paper
  • Downloaded 606 times
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    • Site-wide: 79,188
    • In cell biology: 3,527
  • Year to date:
    • Site-wide: 110,864
  • Since beginning of last month:
    • Site-wide: 109,776

RSQ: a statistical method for quantification of isoform-specific structurome using transcriptome-wide structural profiling data

bioinformatics more details view paper
  • Downloaded 568 times
  • Download rankings, all-time:
    • Site-wide: 85,937
    • In bioinformatics: 7,439
  • Year to date:
    • Site-wide: 198,991
  • Since beginning of last month:
    • Site-wide: 187,795

Widespread transcriptional responses to the thermal stresses are prewired in human 3D genome

genomics more details view paper
  • Downloaded 564 times
  • Download rankings, all-time:
    • Site-wide: 86,652
    • In genomics: 5,450
  • Year to date:
    • Site-wide: 126,883
  • Since beginning of last month:
    • Site-wide: 79,342

Rare non-synonymous germline mutations systematically define the risk of triple negative breast cancer

cancer biology more details view paper
  • Downloaded 511 times
  • Download rankings, all-time:
    • Site-wide: 97,464
    • In cancer biology: 2,866
  • Year to date:
    • Site-wide: 141,454
  • Since beginning of last month:
    • Site-wide: 109,820

DAGM: a novel modelling framework to assess the risk of HER2-negative breast cancer based on germline rare coding mutations

oncology more details view paper
  • Downloaded 330 times
  • Download rankings, all-time:
    • Site-wide: 145,357
    • In oncology: 457
  • Year to date:
    • Site-wide: 144,302
  • Since beginning of last month:
    • Site-wide: 200,552

Characterizing microRNA-mediated modulation of gene expression noise and its effect on synthetic gene circuits

systems biology more details view paper
  • Downloaded 283 times
  • Download rankings, all-time:
    • Site-wide: 159,387
    • In systems biology: 3,119
  • Year to date:
    • Site-wide: 197,681
  • Since beginning of last month:
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