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Author: Robert Lanfear

  • ORCiD: http://orcid.org/0000-0002-1140-2596
  • Most recently observed institution: Department of Ecology and Evolution, Research School of Biology, Australian National University, Canberra, ACT 2601, Australia

Rankings

  • All-time downloads: 23,951 (rank: 9,495 )
  • Categories:
    • bioinformatics: 3,962 (rank: 3,957 )
    • cancer biology: 1,130 (rank: 9,612 (tie) )
    • evolutionary biology: 5,473 (rank: 680 )
    • genomics: 11,820 (rank: 1,851 )
    • molecular biology: 1,129 (rank: 6,534 (tie) )
    • plant biology: 437 (rank: 13,594 (tie) )

Downloads per author, site-wide

Preprints

A comprehensive toolkit to enable MinION long-read sequencing in any laboratory

genomics more details view paper
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    • Site-wide: 1,696
    • In genomics: 131
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    • Site-wide: 42,439

sangeranalyseR: simple and interactive analysis of Sanger sequencing data in R

bioinformatics more details view paper
  • Downloaded 2,124 times
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    • Site-wide: 9,099
    • In bioinformatics: 1,002
  • Year to date:
    • Site-wide: 3,572
  • Since beginning of last month:
    • Site-wide: 16,704

IQ-TREE 2: New models and efficient methods for phylogenetic inference in the genomic era

evolutionary biology more details view paper
  • Downloaded 2,015 times
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    • Site-wide: 9,849
    • In evolutionary biology: 268
  • Year to date:
    • Site-wide: 23,261
  • Since beginning of last month:
    • Site-wide: 128,660

New methods to calculate concordance factors for phylogenomic datasets

bioinformatics more details view paper
  • Downloaded 1,648 times
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    • Site-wide: 13,292
    • In bioinformatics: 1,477
  • Year to date:
    • Site-wide: 64,993
  • Since beginning of last month:
    • Site-wide: 121,700

A phylogeny-based metric for estimating changes in transmissibility from recurrent mutations in SARS-CoV-2

genomics more details view paper
  • Downloaded 1,279 times
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    • Site-wide: 19,656
    • In genomics: 1,835
  • Year to date:
    • Site-wide: 3,709
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    • Site-wide: 6,761

Ultrafast Sample Placement on Existing Trees (UShER) Empowers Real-Time Phylogenetics for the SARS-CoV-2 Pandemic

genomics more details view paper
  • Downloaded 1,190 times
  • Download rankings, all-time:
    • Site-wide: 21,931
    • In genomics: 2,039
  • Year to date:
    • Site-wide: 8,608
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    • Site-wide: 65,496

Assembly of chloroplast genomes with long- and short-read data: a comparison of approaches using Eucalyptus pauciflora as a test case

genomics more details view paper
  • Downloaded 1,132 times
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    • Site-wide: 23,630
    • In genomics: 2,178
  • Year to date:
    • Site-wide: 124,326
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    • Site-wide: 145,811

Cancer phylogenetics using single-cell RNA-seq data

cancer biology more details view paper
  • Downloaded 1,130 times
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    • Site-wide: 23,672
    • In cancer biology: 573
  • Year to date:
    • Site-wide: 4,458
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    • Site-wide: 11,036

The Prevalence and Impact of Model Violations in Phylogenetics Analysis

molecular biology more details view paper
  • Downloaded 1,129 times
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    • Site-wide: 23,738
    • In molecular biology: 633
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Primate phylogenomics uncovers multiple rapid radiations and ancient interspecific introgression

evolutionary biology more details view paper
  • Downloaded 1,092 times
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    • Site-wide: 24,992
    • In evolutionary biology: 981
  • Year to date:
    • Site-wide: 63,290
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    • Site-wide: 98,935

The draft nuclear genome assembly of Eucalyptus pauciflora: new approaches to comparing de novo assemblies

genomics more details view paper
  • Downloaded 749 times
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    • Site-wide: 43,377
    • In genomics: 3,428
  • Year to date:
    • Site-wide: 95,629
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    • Site-wide: 86,339

Linking Branch Lengths Across Loci Provides the Best Fit for Phylogenetic Inference

evolutionary biology more details view paper
  • Downloaded 655 times
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    • Site-wide: 52,283
    • In evolutionary biology: 2,506
  • Year to date:
    • Site-wide: 75,916
  • Since beginning of last month:
    • Site-wide: 63,467

QMaker: Fast and accurate method to estimate empirical models of protein evolution

evolutionary biology more details view paper
  • Downloaded 558 times
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    • Site-wide: 64,186
    • In evolutionary biology: 3,163
  • Year to date:
    • Site-wide: 57,791
  • Since beginning of last month:
    • Site-wide: 93,778

Pandemic-Scale Phylogenomics Reveals Elevated Recombination Rates in the SARS-CoV-2 Spike Region

evolutionary biology more details view paper
  • Downloaded 555 times
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    • Site-wide: 64,642
    • In evolutionary biology: 3,192
  • Year to date:
    • Site-wide: 13,515
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    • Site-wide: 6,104

Molecular evolutionary consequences of island colonisation

evolutionary biology more details view paper
  • Downloaded 543 times
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    • Site-wide: 66,329
    • In evolutionary biology: 3,279
  • Year to date:
    • Site-wide: 152,282
  • Since beginning of last month:
    • Site-wide: 131,982

A phylogenomic approach reveals a low somatic mutation rate in a long-lived plant

genomics more details view paper
  • Downloaded 513 times
  • Download rankings, all-time:
    • Site-wide: 70,925
    • In genomics: 4,876
  • Year to date:
    • Site-wide: 158,453
  • Since beginning of last month:
    • Site-wide: 145,234

Stable and widespread structural heteroplasmy in chloroplast genomes revealed by a new long-read quantification method

plant biology more details view paper
  • Downloaded 437 times
  • Download rankings, all-time:
    • Site-wide: 84,529
    • In plant biology: 2,192
  • Year to date:
    • Site-wide: 131,830
  • Since beginning of last month:
    • Site-wide: 121,119

nQMaker: estimating time non-reversible amino acid substitution models

bioinformatics more details view paper
  • Downloaded 190 times
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    • Site-wide: 144,618
    • In bioinformatics: 11,151
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    • Site-wide: 61,651
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    • Site-wide: 5,718

The Influence of Model Violation on Phylogenetic Inference: A Simulation Study

evolutionary biology more details view paper
  • Downloaded 55 times
  • Download rankings, all-time:
    • Site-wide: 163,804
    • In evolutionary biology: 7,689
  • Year to date:
    • Site-wide: 152,158
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