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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 73,530 bioRxiv papers from 320,027 authors.

Author: Patrick Wincker

  • ORCiD: http://orcid.org/0000-0001-7562-3454
  • Most recently observed institution: Génomique Métabolique, Genoscope, Institut de biologie François Jacob, Commissariat à l'Energie Atomique (CEA), CNRS, Université Evry, Université Paris-Saclay, Evry, France

Rankings

  • All-time downloads: 9,841 (rank: 5,246 out of 319,996)
  • Categories:
    • bioinformatics: 2,914 (rank: 2,725 out of 27,758)
    • ecology: 2,381 (rank: 425 (tie) out of 13,125)
    • evolutionary biology: 2,130 (rank: 1,189 (tie) out of 17,022)
    • genomics: 2,322 (rank: 6,758 (tie) out of 35,691)
    • molecular biology: 94 (rank: 15,096 (tie) out of 15,729)

Downloads per author, site-wide

Preprints

de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer

bioinformatics more details view paper
  • Downloaded 2,265 times
  • Download rankings, all-time:
    • Site-wide: 2,196 out of 73,530
    • In bioinformatics: 441 out of 7,162
  • Year to date:
    • Site-wide: 50,910 out of 73,530
  • Since beginning of last month:
    • Site-wide: 50,910 out of 73,530

Ecogenomics and biogeochemical impacts of uncultivated globally abundant ocean viruses

ecology more details view paper
  • Downloaded 1,651 times
  • Download rankings, all-time:
    • Site-wide: 3,763 out of 73,530
    • In ecology: 70 out of 3,192
  • Year to date:
    • Site-wide: 17,766 out of 73,530
  • Since beginning of last month:
    • Site-wide: 17,766 out of 73,530

The genome of the jellyfish Clytia hemisphaerica and the evolution of the cnidarian life-cycle

evolutionary biology more details view paper
  • Downloaded 1,399 times
  • Download rankings, all-time:
    • Site-wide: 5,000 out of 73,530
    • In evolutionary biology: 250 out of 4,749
  • Year to date:
    • Site-wide: 25,540 out of 73,530
  • Since beginning of last month:
    • Site-wide: 25,540 out of 73,530

High-quality de novo genome assembly of the Dekkera bruxellensis UMY321 yeast isolate using Nanopore MinION sequencing

genomics more details view paper
  • Downloaded 867 times
  • Download rankings, all-time:
    • Site-wide: 10,987 out of 73,530
    • In genomics: 1,591 out of 4,879
  • Year to date:
    • Site-wide: 65,727 out of 73,530
  • Since beginning of last month:
    • Site-wide: 65,727 out of 73,530

Peculiar hybrid genomes of devastating plant pests promote plasticity in the absence of sex and meiosis

evolutionary biology more details view paper
  • Downloaded 731 times
  • Download rankings, all-time:
    • Site-wide: 14,166 out of 73,530
    • In evolutionary biology: 947 out of 4,749
  • Year to date:
    • Site-wide: 58,921 out of 73,530
  • Since beginning of last month:
    • Site-wide: 58,921 out of 73,530

Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems

ecology more details view paper
  • Downloaded 730 times
  • Download rankings, all-time:
    • Site-wide: 14,183 out of 73,530
    • In ecology: 370 out of 3,192
  • Year to date:
    • Site-wide: 2,946 out of 73,530
  • Since beginning of last month:
    • Site-wide: 2,946 out of 73,530

A flexible pipeline combining clustering and correction tools for prokaryotic and eukaryotic metabarcoding

bioinformatics more details view paper
  • Downloaded 649 times
  • Download rankings, all-time:
    • Site-wide: 16,850 out of 73,530
    • In bioinformatics: 2,574 out of 7,162
  • Year to date:
    • Site-wide: 1,585 out of 73,530
  • Since beginning of last month:
    • Site-wide: 1,585 out of 73,530

Transcriptome reconstruction and functional analysis of eukaryotic marine plankton communities via high-throughput metagenomics and metatranscriptomics

genomics more details view paper
  • Downloaded 387 times
  • Download rankings, all-time:
    • Site-wide: 32,237 out of 73,530
    • In genomics: 3,162 out of 4,879
  • Year to date:
    • Site-wide: 7,554 out of 73,530
  • Since beginning of last month:
    • Site-wide: 7,554 out of 73,530

Investigating Population-scale Allele Specific Expression in Wild Populations of Oithona similis (Cyclopoida, Claus 1866)

genomics more details view paper
  • Downloaded 340 times
  • Download rankings, all-time:
    • Site-wide: 36,819 out of 73,530
    • In genomics: 3,421 out of 4,879
  • Year to date:
    • Site-wide: 21,049 out of 73,530
  • Since beginning of last month:
    • Site-wide: 21,049 out of 73,530

Analysis Of The Genomic Basis Of Functional Diversity In Dinoflagellates Using A Transcriptome-Based Sequence Similarity Network

genomics more details view paper
  • Downloaded 317 times
  • Download rankings, all-time:
    • Site-wide: 39,134 out of 73,530
    • In genomics: 3,549 out of 4,879
  • Year to date:
    • Site-wide: 49,578 out of 73,530
  • Since beginning of last month:
    • Site-wide: 49,578 out of 73,530

A de novo approach to disentangle partner identity and function in holobiont systems

genomics more details view paper
  • Downloaded 262 times
  • Download rankings, all-time:
    • Site-wide: 45,880 out of 73,530
    • In genomics: 3,884 out of 4,879
  • Year to date:
    • Site-wide: 68,620 out of 73,530
  • Since beginning of last month:
    • Site-wide: 68,620 out of 73,530

An assessment of environmental metabarcoding protocols aiming at favouring contemporary biodiversity in inventories of deep-sea communities

genomics more details view paper
  • Downloaded 149 times
  • Download rankings, all-time:
    • Site-wide: 62,600 out of 73,530
    • In genomics: 4,537 out of 4,879
  • Year to date:
    • Site-wide: 13,382 out of 73,530
  • Since beginning of last month:
    • Site-wide: 13,382 out of 73,530

Proteolysis and neurogenesis modulated by LNR domain proteins explosion support male differentiation in the crustacean Oithona nana

molecular biology more details view paper
  • Downloaded 94 times
  • Download rankings, all-time:
    • Site-wide: 69,788 out of 73,530
    • In molecular biology: 2,242 out of 2,394
  • Year to date:
    • Site-wide: 39,728 out of 73,530
  • Since beginning of last month:
    • Site-wide: 39,728 out of 73,530

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