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Author: Ian Holmes

Rankings

  • All-time downloads: 8,144 (rank: 24,815 (tie) )
  • Categories:
    • bioinformatics: 6,886 (rank: 1,510 )
    • evolutionary biology: 131 (rank: 23,443 (tie) )
    • synthetic biology: 1,127 (rank: 1,622 (tie) )

Downloads per author, site-wide

Preprints

Pair consensus decoding improves accuracy of neural network basecallers for nanopore sequencing

bioinformatics more details view paper
  • Downloaded 1,912 times
  • Download rankings, all-time:
    • Site-wide: 8,288
    • In bioinformatics: 984
  • Year to date:
    • Site-wide: 4,037
  • Since beginning of last month:
    • Site-wide: 4,641

k-BOOM: A Bayesian approach to ontology structure inference, with applications in disease ontology construction

bioinformatics more details view paper
  • Downloaded 1,607 times
  • Download rankings, all-time:
    • Site-wide: 10,744
    • In bioinformatics: 1,301
  • Year to date:
    • Site-wide: 45,542
  • Since beginning of last month:
    • Site-wide: 37,692

Modular non-repeating codes for DNA storage

synthetic biology more details view paper
  • Downloaded 1,127 times
  • Download rankings, all-time:
    • Site-wide: 18,286
    • In synthetic biology: 221
  • Year to date:
    • Site-wide: 57,562
  • Since beginning of last month:
    • Site-wide: 60,342

JBrowse Connect: A server API to connect JBrowse instances and users

bioinformatics more details view paper
  • Downloaded 709 times
  • Download rankings, all-time:
    • Site-wide: 35,290
    • In bioinformatics: 3,908
  • Year to date:
    • Site-wide: 73,256
  • Since beginning of last month:
    • Site-wide: 90,653

Apollo: Democratizing genome annotation

bioinformatics more details view paper
  • Downloaded 695 times
  • Download rankings, all-time:
    • Site-wide: 36,279
    • In bioinformatics: 4,001
  • Year to date:
    • Site-wide: 105,263
  • Since beginning of last month:
    • Site-wide: 112,152

WTFgenes: What's The Function of these genes? Static sites for model-based gene set analysis

bioinformatics more details view paper
  • Downloaded 638 times
  • Download rankings, all-time:
    • Site-wide: 40,649
    • In bioinformatics: 4,385
  • Year to date:
    • Site-wide: 122,524
  • Since beginning of last month:
    • Site-wide: 133,245

Historian: accurate reconstruction of ancestral sequences and evolutionary rates

bioinformatics more details view paper
  • Downloaded 477 times
  • Download rankings, all-time:
    • Site-wide: 57,744
    • In bioinformatics: 5,797
  • Year to date:
    • Site-wide: 125,270
  • Since beginning of last month:
    • Site-wide: 136,183

CNVpytor: a tool for CNV/CNA detection and analysis from read depth and allele imbalance in whole genome sequencing

bioinformatics more details view paper
  • Downloaded 427 times
  • Download rankings, all-time:
    • Site-wide: 64,749
    • In bioinformatics: 6,310
  • Year to date:
    • Site-wide: 5,213
  • Since beginning of last month:
    • Site-wide: 10,179

Approximation of Indel Evolution by Differential Calculus of Finite State Automata

bioinformatics more details view paper
  • Downloaded 421 times
  • Download rankings, all-time:
    • Site-wide: 65,616
    • In bioinformatics: 6,362
  • Year to date:
    • Site-wide: 72,637
  • Since beginning of last month:
    • Site-wide: 85,342

Evidence of stock connectivity, hybridization and misidentification in white anglerfish support the need for adopting a genetics-informed fisheries management approach

evolutionary biology more details view paper
  • Downloaded 131 times
  • Download rankings, all-time:
    • Site-wide: 125,344
    • In evolutionary biology: 6,344
  • Year to date:
    • Site-wide: 25,818
  • Since beginning of last month:
    • Site-wide: 28,974

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