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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 70,616 bioRxiv papers from 308,268 authors.

Author: Ying Zhang

Rankings

  • All-time downloads: 33,043 (rank: 573 out of 308,268)
  • Categories:
    • biochemistry: 310 (rank: 6,961 (tie) out of 12,489)
    • bioinformatics: 923 (rank: 9,329 (tie) out of 26,828)
    • biophysics: 1,111 (rank: 1,746 (tie) out of 12,357)
    • cancer biology: 184 (rank: 15,868 (tie) out of 20,066)
    • cell biology: 510 (rank: 8,106 (tie) out of 21,314)
    • developmental biology: 271 (rank: 7,757 (tie) out of 11,832)
    • epidemiology: 388 (rank: 3,715 (tie) out of 9,540)
    • genetics: 782 (rank: 12,799 (tie) out of 30,536)
    • genomics: 11,886 (rank: 876 out of 34,853)
    • microbiology: 13,836 (rank: 31 out of 31,946)
    • molecular biology: 1,652 (rank: 1,078 out of 15,050)
    • neuroscience: 699 (rank: 16,735 (tie) out of 52,021)
    • systems biology: 491 (rank: 4,480 (tie) out of 9,258)

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Preprints

Chinese Glioma Genome Atlas (CGGA): A Comprehensive Resource with Functional Genomic Data for Chinese Glioma Patients

genomics more details view paper

No bioRxiv download data for this paper yet.

Computational Pan-Genomics: Status, Promises and Challenges

genomics more details view paper
  • Downloaded 4,153 times
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    • In genomics: 170 out of 4,714
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    • Site-wide: 12,239 out of 70,616

De novo assembly and phasing of dikaryotic genomes from two isolates of Puccinia coronata f. sp. avenae, the causal agent of oat crown rust

genomics more details view paper
  • Downloaded 3,040 times
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    • In genomics: 280 out of 4,714
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    • Site-wide: 27,789 out of 70,616

High Activity Of Selective Essential Oils Against Stationary Phase Borrelia burgdorferi As A Persister Model

microbiology more details view paper
  • Downloaded 2,843 times
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    • Site-wide: 12,493 out of 70,616

Evaluation of Natural and Botanical Medicines for Activity against Growing and Non-growing Forms of B. burgdorferi

microbiology more details view paper
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    • Site-wide: 1,343 out of 70,616

Genome-wide characterization of PRE-1 reveals a hidden evolutionary relationship between suidae and primates

genomics more details view paper
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Template switching causes artificial junction formation and false identification of circular RNAs

molecular biology more details view paper
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    • In molecular biology: 163 out of 2,266
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Additional Essential Oils with High Activity against Stationary Phase Borrelia burgdorferi

microbiology more details view paper
  • Downloaded 1,299 times
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    • In microbiology: 187 out of 5,733
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    • Site-wide: 14,613 out of 70,616
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    • Site-wide: 19,722 out of 70,616

Biofilm/Persister/Stationary Phase Bacteria Cause More Severe Disease Than Log Phase Bacteria I Biofilm Borrelia burgdorferi Not Only Display More Tolerance to Lyme Antibiotics But Also Cause More Severe Pathology In a Mouse Arthritis Model: Implications for Understanding Persistence, PTLDS and Treatment Failure

microbiology more details view paper
  • Downloaded 1,112 times
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    • In microbiology: 272 out of 5,733
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    • Site-wide: 9,154 out of 70,616
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Discovering in vivo cytokine eQTL interactions from a lupus clinical trial

genomics more details view paper
  • Downloaded 978 times
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    • In genomics: 1,328 out of 4,714
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The Genome of the Zebra Mussel, Dreissena polymorpha: A Resource for Invasive Species Research

genomics more details view paper
  • Downloaded 846 times
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    • In genomics: 1,574 out of 4,714
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H3K27me3-rich genomic regions can function as silencers to repress gene expression via chromatin interactions

genomics more details view paper
  • Downloaded 818 times
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    • In genomics: 1,627 out of 4,714
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Local and global chromatin interactions are altered by large genomic deletions associated with human brain development

genetics more details view paper
  • Downloaded 782 times
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    • In genetics: 847 out of 3,913
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    • Site-wide: 20,538 out of 70,616

Mutations in efflux pump Rv1258c (Tap) cause resistance to pyrazinamide and other drugs in M. tuberculosis

microbiology more details view paper
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    • In microbiology: 902 out of 5,733
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    • Site-wide: 62,224 out of 70,616

High-throughput single-particle tracking reveals nested membrane nanodomain organization that dictates Ras diffusion and trafficking

biophysics more details view paper
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    • In biophysics: 693 out of 3,009
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The Influence of Molecular Reach and Diffusivity on the Efficacy of Membrane-Confined Reactions

biophysics more details view paper
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    • In biophysics: 705 out of 3,009
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    • Site-wide: 6,800 out of 70,616

An Array of 60,000 Antibodies for Proteome-Scale Antibody Generation and Target Discovery

systems biology more details view paper
  • Downloaded 491 times
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    • In systems biology: 682 out of 1,944
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Activity of Sulfa Drugs and Their Combinations against Stationary Phase B. burgdorferi in vitro

microbiology more details view paper
  • Downloaded 490 times
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    • In microbiology: 1,273 out of 5,733
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  • Since beginning of last month:
    • Site-wide: 32,545 out of 70,616

Biofilm/Persister/Stationary Phase Bacteria Cause More Severe Disease Than Log Phase Bacteria II Infection with Persister Forms of Staphylococcus aureus Causes a Chronic Persistent Skin Infection with More Severe Lesion that Takes Longer to Heal and is not Eradicated by the Current Recommended Treatment in Mice

microbiology more details view paper
  • Downloaded 476 times
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    • In microbiology: 1,332 out of 5,733
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    • Site-wide: 18,378 out of 70,616

Predicting chromatin interactions between open chromatin regions from DNA sequences

bioinformatics more details view paper
  • Downloaded 458 times
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    • In bioinformatics: 3,477 out of 6,912
  • Year to date:
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    • Site-wide: 10,598 out of 70,616

Identification of essential oils with activity against stationary phase Staphylococcus aureus

microbiology more details view paper
  • Downloaded 407 times
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    • Site-wide: 28,839 out of 70,616
    • In microbiology: 1,686 out of 5,733
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    • Site-wide: 1,084 out of 70,616
  • Since beginning of last month:
    • Site-wide: 2,072 out of 70,616

Identification of a Novel Gene argJ involved in Arginine Biosynthesis Critical for Persister Formation in Staphylococcus aureus

microbiology more details view paper
  • Downloaded 350 times
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    • In microbiology: 2,111 out of 5,733
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  • Since beginning of last month:
    • Site-wide: 59,961 out of 70,616

Identification of disease resistance genes from a Chinese wild grapevine (Vitis davidii) by analysing grape transcriptomes and transgenic Arabidopsis

molecular biology more details view paper
  • Downloaded 324 times
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    • In molecular biology: 1,083 out of 2,266
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Cyclin B3 is specifically required for metaphase to anaphase transition in mouse oocyte meiosis I

cell biology more details view paper
  • Downloaded 308 times
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    • In cell biology: 1,842 out of 3,458
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    • Site-wide: 62,882 out of 70,616

Identification of essential oils with strong activity against stationary phase uropathogenic Escherichia coli

microbiology more details view paper
  • Downloaded 280 times
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    • Site-wide: 41,139 out of 70,616
    • In microbiology: 2,708 out of 5,733
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    • Site-wide: 4,687 out of 70,616

A comprehensive plasma metabolomics dataset for a cohort of mouse knockouts within the international mouse phenotyping consortium

bioinformatics more details view paper
  • Downloaded 275 times
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    • In bioinformatics: 4,911 out of 6,912
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Specific miRNA-GPCR networks regulate Sox9a/Sox9b activities to promote gonadal renewal in zebrafish

developmental biology more details view paper
  • Downloaded 271 times
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Clofazimine targets essential nucleoid associated protein, mycobacterial integration host factor (mIHF), in Mycobacterium tuberculosis

microbiology more details view paper
  • Downloaded 271 times
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    • Site-wide: 65,785 out of 70,616

Identification of drug candidates that enhance pyrazinamide activity from a clinical drug library

microbiology more details view paper
  • Downloaded 271 times
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    • In microbiology: 2,807 out of 5,733
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    • Site-wide: 51,968 out of 70,616

Variation in genome content and predatory phenotypes between Bdellovibrio sp. NC01 isolated from soil and B. bacteriovorus type strain HD100

microbiology more details view paper
  • Downloaded 262 times
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    • Site-wide: 24,330 out of 70,616

ErbB4 deletion in noradrenergic neurons in the locus coeruleus induces mania-like behavior via elevated catecholamines

neuroscience more details view paper
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Modeling the relative role of human mobility, land-use and climate factors on dengue outbreak emergence in Sri Lanka

epidemiology more details view paper
  • Downloaded 255 times
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Identification of small regulatory RNAs involved in persister formation

microbiology more details view paper
  • Downloaded 251 times
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Varying Effects of Common Tuberculosis Drugs on Enhancing Clofazimine Activity in vitro

microbiology more details view paper
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Identification of novel mutations associated with clofazimine resistance in Mycobacterium abscessus

microbiology more details view paper
  • Downloaded 232 times
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    • In microbiology: 3,252 out of 5,733
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    • Site-wide: 65,743 out of 70,616

Identification of Genes Regulating Cell Death in Staphylococcus aureus

microbiology more details view paper
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    • Site-wide: 56,454 out of 70,616

Proteomic Analyses of Morphological Variants of Borrelia burgdorferi Shed New Light on Persistence Mechanisms: Implications for Pathogenesis, Diagnosis and Treatment

microbiology more details view paper
  • Downloaded 223 times
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    • Site-wide: 33,046 out of 70,616

Spinal V3 interneurons and left-right coordination in mammalian locomotion

neuroscience more details view paper
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    • In neuroscience: 8,676 out of 12,701
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A dynamic role for dopamine receptors in the control of mammalian spinal networks

neuroscience more details view paper
  • Downloaded 218 times
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    • In neuroscience: 8,709 out of 12,701
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    • Site-wide: 33,545 out of 70,616

Identification of Polynucleotide Phosphorylase (PNPase) in Escherichia coli Involved in Persister Formation

microbiology more details view paper
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UNC-45A is preferentially expressed in epithelial cells and binds to and co-localizes with interphase MTs

cell biology more details view paper
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Identification of novel genes including rpmF and yjjQ critical for Type II persister formation in Escherichia coli

microbiology more details view paper
  • Downloaded 194 times
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    • Site-wide: 26,675 out of 70,616

Development of a novel signature of long noncoding RNAs as a prognostic biomarker for esophageal cancer

bioinformatics more details view paper
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    • In bioinformatics: 5,795 out of 6,912
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    • Site-wide: 66,865 out of 70,616

TP63, SOX2 and KLF5 Establish Core Regulatory Circuitry and Construct Cancer Specific Epigenome in Esophageal Squamous Cell Carcinoma

cancer biology more details view paper
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    • Site-wide: 8,200 out of 70,616

A Drug Combination Approach Targeting Both Growing Bacteria and Dormant Persisters Eradicate Persistent Staphylococcus aureus Biofilm Infection

microbiology more details view paper
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Introducing RpsA Point Mutation Δ438A or D123A into the Chromosome of M. tuberculosis Confirms its Role in Causing Resistance to Pyrazinamide

microbiology more details view paper
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Integrative Modeling of a Sin3/HDAC Complex Sub-structure

biochemistry more details view paper
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    • Site-wide: 19,564 out of 70,616

Identification of novel mutations in LprG (rv1411c), rv0521, rv3630, rv0010c, ppsC, cyp128 associated with pyrazinoic acid/pyrazinamide resistance in Mycobacterium tuberculosis

microbiology more details view paper
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    • Site-wide: 49,011 out of 70,616

The circulating lipidome is largely defined by sex descriptors in the GOLDN, GeneBank and the ADNI studies

biochemistry more details view paper
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Identifying the diagnostic value of microRNA-421 in gastric cancer patients: a meta-analysis

epidemiology more details view paper
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Ranking of Major Classes of Antibiotics for Activity against Stationary Phase Pseudomonas aeruginosa and Identification of Clinafloxacin + Cefuroxime + Gentamicin Drug Combination that Eradicates Persistent P. aeruginosa Infection in a Murine Cystic Fibrosis Model

microbiology more details view paper
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Role of DNA Methylation in Persister Formation in Uropathogenic E. coli

microbiology more details view paper
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A Novel LysR-Type Global Regulator RpvA Controls Persister Formation and Virulence in Staphylococcus aureus

microbiology more details view paper
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    • Site-wide: 6,244 out of 70,616

Fibroblast Protection of Borrelia burgdorferi from Doxycycline, Cefuroxime and Daptomycin Combination is Eliminated by Oregano or Carvacrol Essential Oil

microbiology more details view paper
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