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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 64,772 bioRxiv papers from 287,133 authors.

Author: Uwe Ohler

Rankings

  • All-time downloads: 15,229 (rank: 2,074 (tie) out of 287,133)
  • Categories:
    • bioinformatics: 3,976 (rank: 1,611 out of 24,984)
    • cancer biology: 1,099 (rank: 2,436 (tie) out of 17,840)
    • genomics: 5,305 (rank: 2,341 (tie) out of 32,643)
    • molecular biology: 4,466 (rank: 164 out of 13,459)
    • systems biology: 383 (rank: 4,903 (tie) out of 8,734)

Downloads per author, site-wide

Preprints

The Chloroplast RNA binding protein CP31A shows cold-dependent RNA association and mediates cold-resistance via its acidic domain

plant biology more details view paper

No bioRxiv download data for this paper yet.

Purification of Cross-linked RNA-Protein Complexes by Phenol-Toluol Extraction

molecular biology more details view paper
  • Downloaded 3,912 times
  • Download rankings, all-time:
    • Site-wide: 681 out of 64,772
    • In molecular biology: 16 out of 2,050
  • Year to date:
    • Site-wide: 287 out of 64,772
  • Since beginning of last month:
    • Site-wide: 1,366 out of 64,772

Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets via protocol-specific bias modeling

genomics more details view paper
  • Downloaded 1,758 times
  • Download rankings, all-time:
    • Site-wide: 2,891 out of 64,772
    • In genomics: 577 out of 4,433
  • Year to date:
    • Site-wide: 5,940 out of 64,772
  • Since beginning of last month:
    • Site-wide: 18,483 out of 64,772

A spectral analysis approach to detect actively translated open reading frames in high-resolution ribosome profiling data

genomics more details view paper
  • Downloaded 1,107 times
  • Download rankings, all-time:
    • Site-wide: 6,269 out of 64,772
    • In genomics: 1,035 out of 4,433
  • Year to date:
    • Site-wide: 39,409 out of 64,772
  • Since beginning of last month:
    • Site-wide: 46,889 out of 64,772

Integrated Proteogenomic Deep Sequencing and Analytics Accurately Identify Non-Canonical Peptides in Tumor Immunopeptidomes

cancer biology more details view paper
  • Downloaded 1,099 times
  • Download rankings, all-time:
    • Site-wide: 6,356 out of 64,772
    • In cancer biology: 169 out of 2,154
  • Year to date:
    • Site-wide: 1,434 out of 64,772
  • Since beginning of last month:
    • Site-wide: 1,219 out of 64,772

Deep neural networks for interpreting RNA binding protein target preferences

bioinformatics more details view paper
  • Downloaded 1,011 times
  • Download rankings, all-time:
    • Site-wide: 7,248 out of 64,772
    • In bioinformatics: 1,304 out of 6,408
  • Year to date:
    • Site-wide: 1,645 out of 64,772
  • Since beginning of last month:
    • Site-wide: 22,631 out of 64,772

Integrative classification of human coding and non-coding genes based on RNA metabolism profiles

genomics more details view paper
  • Downloaded 988 times
  • Download rankings, all-time:
    • Site-wide: 7,517 out of 64,772
    • In genomics: 1,201 out of 4,433
  • Year to date:
    • Site-wide: 39,177 out of 64,772
  • Since beginning of last month:
    • Site-wide: 36,526 out of 64,772

Deciphering human ribonucleoprotein regulatory networks

genomics more details view paper
  • Downloaded 957 times
  • Download rankings, all-time:
    • Site-wide: 7,901 out of 64,772
    • In genomics: 1,243 out of 4,433
  • Year to date:
    • Site-wide: 23,757 out of 64,772
  • Since beginning of last month:
    • Site-wide: 15,497 out of 64,772

omniCLIP: Bayesian identification of protein-RNA interactions from CLIP-Seq data

bioinformatics more details view paper
  • Downloaded 693 times
  • Download rankings, all-time:
    • Site-wide: 12,936 out of 64,772
    • In bioinformatics: 2,126 out of 6,408
  • Year to date:
    • Site-wide: 38,441 out of 64,772
  • Since beginning of last month:
    • Site-wide: 23,173 out of 64,772

Janggu: Deep Learning for Genomics

bioinformatics more details view paper
  • Downloaded 627 times
  • Download rankings, all-time:
    • Site-wide: 14,844 out of 64,772
    • In bioinformatics: 2,349 out of 6,408
  • Year to date:
    • Site-wide: 3,801 out of 64,772
  • Since beginning of last month:
    • Site-wide: 8,717 out of 64,772

ssHMM: Extracting intuitive sequence-structure motifs from high-throughput RNA-binding protein data

bioinformatics more details view paper
  • Downloaded 566 times
  • Download rankings, all-time:
    • Site-wide: 17,075 out of 64,772
    • In bioinformatics: 2,611 out of 6,408
  • Year to date:
    • Site-wide: 57,557 out of 64,772
  • Since beginning of last month:
    • Site-wide: 49,981 out of 64,772

Determinants of Transcription Initiation Directionality in Metazoans

molecular biology more details view paper
  • Downloaded 554 times
  • Download rankings, all-time:
    • Site-wide: 17,602 out of 64,772
    • In molecular biology: 511 out of 2,050
  • Year to date:
    • Site-wide: 58,958 out of 64,772
  • Since beginning of last month:
    • Site-wide: 46,268 out of 64,772

Ribo-seQC: comprehensive analysis of cytoplasmic and organellar ribosome profiling data

bioinformatics more details view paper
  • Downloaded 553 times
  • Download rankings, all-time:
    • Site-wide: 17,645 out of 64,772
    • In bioinformatics: 2,678 out of 6,408
  • Year to date:
    • Site-wide: 4,720 out of 64,772
  • Since beginning of last month:
    • Site-wide: 6,692 out of 64,772

SSMART: Sequence-structure motif identification for RNA-binding proteins

bioinformatics more details view paper
  • Downloaded 526 times
  • Download rankings, all-time:
    • Site-wide: 18,794 out of 64,772
    • In bioinformatics: 2,813 out of 6,408
  • Year to date:
    • Site-wide: 27,468 out of 64,772
  • Since beginning of last month:
    • Site-wide: 16,177 out of 64,772

SaTAnn quantifies translation on the functionally heterogeneous transcriptome

genomics more details view paper
  • Downloaded 495 times
  • Download rankings, all-time:
    • Site-wide: 20,288 out of 64,772
    • In genomics: 2,336 out of 4,433
  • Year to date:
    • Site-wide: 5,676 out of 64,772
  • Since beginning of last month:
    • Site-wide: 11,925 out of 64,772

Global identification of functional microRNA::mRNA interactions in Drosophila

systems biology more details view paper
  • Downloaded 383 times
  • Download rankings, all-time:
    • Site-wide: 27,142 out of 64,772
    • In systems biology: 818 out of 1,825
  • Year to date:
    • Site-wide: 24,888 out of 64,772
  • Since beginning of last month:
    • Site-wide: None out of 64,772

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