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Author: Frank Johannes

Rankings

  • All-time downloads: 7,934 (rank: 25,288 (tie) )
  • Categories:
    • bioinformatics: 4,412 (rank: 2,782 )
    • genetics: 924 (rank: 16,437 (tie) )
    • genomics: 1,077 (rank: 21,066 (tie) )
    • plant biology: 1,521 (rank: 2,073 (tie) )

Downloads per author, site-wide

Preprints

chromstaR: Tracking combinatorial chromatin state dynamics in space and time

bioinformatics more details view paper
  • Downloaded 2,280 times
  • Download rankings, all-time:
    • Site-wide: 6,347
    • In bioinformatics: 720
  • Year to date:
    • Site-wide: 39,929
  • Since beginning of last month:
    • Site-wide: 34,449

Epigenetic divergence is sufficient to trigger heterosis in Arabidopsis thaliana

plant biology more details view paper
  • Downloaded 1,334 times
  • Download rankings, all-time:
    • Site-wide: 14,072
    • In plant biology: 173
  • Year to date:
    • Site-wide: 99,983
  • Since beginning of last month:
    • Site-wide: 104,060

MethylStar: A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing data

bioinformatics more details view paper
  • Downloaded 689 times
  • Download rankings, all-time:
    • Site-wide: 36,358
    • In bioinformatics: 4,022
  • Year to date:
    • Site-wide: 38,943
  • Since beginning of last month:
    • Site-wide: 49,883

Learning sequence patterns of AGO-sRNA affinity from high-throughput sequencing libraries to improve in silico functional small RNA detection and classification in plants

bioinformatics more details view paper
  • Downloaded 666 times
  • Download rankings, all-time:
    • Site-wide: 38,063
    • In bioinformatics: 4,181
  • Year to date:
    • Site-wide: 80,943
  • Since beginning of last month:
    • Site-wide: 121,889

The somatic genetic and epigenetic mutation rate in a wild long-lived perennial Populus trichocarpa

genomics more details view paper
  • Downloaded 653 times
  • Download rankings, all-time:
    • Site-wide: 39,029
    • In genomics: 3,255
  • Year to date:
    • Site-wide: 46,768
  • Since beginning of last month:
    • Site-wide: 42,327

Signatures of Dobzhansky-Muller Incompatibilities in the Genomes of Recombinant Inbred Lines

genetics more details view paper
  • Downloaded 529 times
  • Download rankings, all-time:
    • Site-wide: 50,674
    • In genetics: 2,348
  • Year to date:
    • Site-wide: 124,822
  • Since beginning of last month:
    • Site-wide: 125,274

METHimpute: Imputation-guided construction of complete methylomes from WGBS data

bioinformatics more details view paper
  • Downloaded 479 times
  • Download rankings, all-time:
    • Site-wide: 56,914
    • In bioinformatics: 5,741
  • Year to date:
    • Site-wide: 114,369
  • Since beginning of last month:
    • Site-wide: 122,025

AlphaBeta: Computational inference of epimutation rates and spectra from high-throughput DNA methylation data in plants

genomics more details view paper
  • Downloaded 424 times
  • Download rankings, all-time:
    • Site-wide: 64,619
    • In genomics: 4,627
  • Year to date:
    • Site-wide: 96,868
  • Since beginning of last month:
    • Site-wide: 113,164

Small RNAs reflect grandparental environments in apomictic dandelion

genetics more details view paper
  • Downloaded 395 times
  • Download rankings, all-time:
    • Site-wide: 69,344
    • In genetics: 3,155
  • Year to date:
    • Site-wide: 102,329
  • Since beginning of last month:
    • Site-wide: 70,176

Recursive Convolutional Neural Networks for Epigenomics

bioinformatics more details view paper
  • Downloaded 298 times
  • Download rankings, all-time:
    • Site-wide: 87,795
    • In bioinformatics: 7,821
  • Year to date:
    • Site-wide: 72,485
  • Since beginning of last month:
    • Site-wide: 42,765

Region-level Epimutation Rates in Arabidopsis thaliana

plant biology more details view paper
  • Downloaded 187 times
  • Download rankings, all-time:
    • Site-wide: 112,610
    • In plant biology: 3,121
  • Year to date:
    • Site-wide: 75,667
  • Since beginning of last month:
    • Site-wide: 85,171

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