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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 62,102 bioRxiv papers from 275,834 authors.

Author: Hongkui Zeng

Rankings

  • All-time downloads: 68,031 (rank: 166 out of 275,834)
  • Categories:
    • bioinformatics: 1,326 (rank: 5,718 (tie) out of 24,244)
    • developmental biology: 334 (rank: 5,064 (tie) out of 10,203)
    • molecular biology: 3 (rank: 12,403 (tie) out of 12,448)
    • neuroscience: 66,368 (rank: 10 out of 45,258)

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Preprints

Relationship between spiking activity and simultaneously recorded fluorescence signals in transgenic mice expressing GCaMP6

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On the correspondence of electrical and optical physiology in in vivo population-scale two-photon calcium imaging.

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A suite of transgenic driver and reporter mouse lines with enhanced brain cell type targeting and functionality

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  • Downloaded 9,635 times
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    • Site-wide: 114 out of 62,102
    • In neuroscience: 16 out of 11,072
  • Year to date:
    • Site-wide: 237 out of 62,102
  • Since beginning of last month:
    • Site-wide: 363 out of 62,102

Shared and distinct transcriptomic cell types across neocortical areas

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  • Downloaded 6,226 times
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    • Site-wide: 264 out of 62,102
    • In neuroscience: 40 out of 11,072
  • Year to date:
    • Site-wide: 1,586 out of 62,102
  • Since beginning of last month:
    • Site-wide: 2,375 out of 62,102

Prospective, brain-wide labeling of neuronal subclasses with enhancer-driven AAVs

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  • Downloaded 5,993 times
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    • Site-wide: 288 out of 62,102
    • In neuroscience: 43 out of 11,072
  • Year to date:
    • Site-wide: 51 out of 62,102
  • Since beginning of last month:
    • Site-wide: 625 out of 62,102

The organization of intracortical connections by layer and cell class in the mouse brain

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  • Downloaded 5,050 times
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    • Site-wide: 383 out of 62,102
    • In neuroscience: 52 out of 11,072
  • Year to date:
    • Site-wide: 502 out of 62,102
  • Since beginning of last month:
    • Site-wide: 311 out of 62,102

Distinct descending motor cortex pathways and their roles in movement

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  • Downloaded 4,539 times
  • Download rankings, all-time:
    • Site-wide: 473 out of 62,102
    • In neuroscience: 59 out of 11,072
  • Year to date:
    • Site-wide: 4,984 out of 62,102
  • Since beginning of last month:
    • Site-wide: 6,323 out of 62,102

Conserved cell types with divergent features between human and mouse cortex

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  • Downloaded 4,359 times
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    • Site-wide: 520 out of 62,102
    • In neuroscience: 67 out of 11,072
  • Year to date:
    • Site-wide: 248 out of 62,102
  • Since beginning of last month:
    • Site-wide: 473 out of 62,102

All-optical electrophysiology reveals brain-state dependent changes in hippocampal subthreshold dynamics and excitability

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  • Downloaded 4,076 times
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    • Site-wide: 591 out of 62,102
    • In neuroscience: 73 out of 11,072
  • Year to date:
    • Site-wide: 2,945 out of 62,102
  • Since beginning of last month:
    • Site-wide: 5,565 out of 62,102

A large-scale, standardized physiological survey reveals higher order coding throughout the mouse visual cortex

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  • Downloaded 3,915 times
  • Download rankings, all-time:
    • Site-wide: 642 out of 62,102
    • In neuroscience: 76 out of 11,072
  • Year to date:
    • Site-wide: 881 out of 62,102
  • Since beginning of last month:
    • Site-wide: 49,222 out of 62,102

Classification of electrophysiological and morphological types in mouse visual cortex

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  • Downloaded 3,663 times
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    • Site-wide: 735 out of 62,102
    • In neuroscience: 94 out of 11,072
  • Year to date:
    • Site-wide: 495 out of 62,102
  • Since beginning of last month:
    • Site-wide: 1,347 out of 62,102

Equivalent high-resolution identification of neuronal cell types with single-nucleus and single-cell RNA-sequencing

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  • Downloaded 3,192 times
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    • Site-wide: 942 out of 62,102
    • In neuroscience: 128 out of 11,072
  • Year to date:
    • Site-wide: 2,132 out of 62,102
  • Since beginning of last month:
    • Site-wide: 4,759 out of 62,102

Single-Cell Transcriptomic Evidence for Dense Intracortical Neuropeptide Networks

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  • Downloaded 2,003 times
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    • Site-wide: 2,191 out of 62,102
    • In neuroscience: 321 out of 11,072
  • Year to date:
    • Site-wide: 370 out of 62,102
  • Since beginning of last month:
    • Site-wide: 2,764 out of 62,102

Sparse recurrent excitatory connectivity in the microcircuit of the adult mouse and human cortex

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  • Downloaded 1,762 times
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    • Site-wide: 2,733 out of 62,102
    • In neuroscience: 405 out of 11,072
  • Year to date:
    • Site-wide: 21,225 out of 62,102
  • Since beginning of last month:
    • Site-wide: 13,766 out of 62,102

Complete single neuron reconstruction reveals morphological diversity in molecularly defined claustral and cortical neuron types

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  • Downloaded 1,618 times
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    • Site-wide: 3,143 out of 62,102
    • In neuroscience: 484 out of 11,072
  • Year to date:
    • Site-wide: 567 out of 62,102
  • Since beginning of last month:
    • Site-wide: 480 out of 62,102

RecV recombinase system for in vivo targeted optogenomic modifications of single cells or cell populations

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  • Downloaded 1,512 times
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    • Site-wide: 3,506 out of 62,102
    • In neuroscience: 550 out of 11,072
  • Year to date:
    • Site-wide: 647 out of 62,102
  • Since beginning of last month:
    • Site-wide: 1,842 out of 62,102

Epigenetic landscape and AAV targeting of human neocortical cell classes

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  • Downloaded 1,463 times
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    • Site-wide: 3,717 out of 62,102
    • In neuroscience: 585 out of 11,072
  • Year to date:
    • Site-wide: 686 out of 62,102
  • Since beginning of last month:
    • Site-wide: 1,622 out of 62,102

Parallel holographic illumination enables sub-millisecond two-photon optogenetic activation in mouse visual cortex in vivo

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  • Downloaded 1,429 times
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    • Site-wide: 3,866 out of 62,102
    • In neuroscience: 602 out of 11,072
  • Year to date:
    • Site-wide: 4,919 out of 62,102
  • Since beginning of last month:
    • Site-wide: 5,419 out of 62,102

Multimodal cell type correspondence by intersectional mFISH in intact tissues

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  • Downloaded 1,227 times
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    • Site-wide: 4,962 out of 62,102
    • In neuroscience: 777 out of 11,072
  • Year to date:
    • Site-wide: 960 out of 62,102
  • Since beginning of last month:
    • Site-wide: 5,029 out of 62,102

High resolution data-driven model of the mouse connectome

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  • Downloaded 1,158 times
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    • Site-wide: 5,453 out of 62,102
    • In neuroscience: 860 out of 11,072
  • Year to date:
    • Site-wide: 12,482 out of 62,102
  • Since beginning of last month:
    • Site-wide: 9,094 out of 62,102

Connectional architecture of a mouse hypothalamic circuit node controlling social behavior

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  • Downloaded 986 times
  • Download rankings, all-time:
    • Site-wide: 7,102 out of 62,102
    • In neuroscience: 1,107 out of 11,072
  • Year to date:
    • Site-wide: 7,521 out of 62,102
  • Since beginning of last month:
    • Site-wide: 19,487 out of 62,102

The Markov link method: a nonparametric approach to combine observations from multiple experiments

bioinformatics more details view paper
  • Downloaded 870 times
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    • Site-wide: 8,656 out of 62,102
    • In bioinformatics: 1,527 out of 6,204
  • Year to date:
    • Site-wide: 4,458 out of 62,102
  • Since beginning of last month:
    • Site-wide: 9,878 out of 62,102

Flexible Learning-Free Segmentation and Reconstruction for Sparse Neuronal Circuit Tracing

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  • Downloaded 802 times
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    • Site-wide: 9,820 out of 62,102
    • In neuroscience: 1,562 out of 11,072
  • Year to date:
    • Site-wide: 12,382 out of 62,102
  • Since beginning of last month:
    • Site-wide: 12,500 out of 62,102

The claustrum is required for reward acquisition under high cognitive demand

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  • Downloaded 568 times
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    • Site-wide: 15,952 out of 62,102
    • In neuroscience: 2,645 out of 11,072
  • Year to date:
    • Site-wide: 27,253 out of 62,102
  • Since beginning of last month:
    • Site-wide: None out of 62,102

SmartScope2: Simultaneous Imaging and Reconstruction of Neuronal Morphology

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  • Downloaded 456 times
  • Download rankings, all-time:
    • Site-wide: 20,984 out of 62,102
    • In bioinformatics: 3,059 out of 6,204
  • Year to date:
    • Site-wide: 51,384 out of 62,102
  • Since beginning of last month:
    • Site-wide: 44,436 out of 62,102

Activation of neuromodulatory axon projections in primary visual cortex during periods of locomotion and pupil dilation

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  • Downloaded 444 times
  • Download rankings, all-time:
    • Site-wide: 21,685 out of 62,102
    • In neuroscience: 3,665 out of 11,072
  • Year to date:
    • Site-wide: 8,687 out of 62,102
  • Since beginning of last month:
    • Site-wide: None out of 62,102

TeraVR Empowers Precise Reconstruction of Complete 3-D Neuronal Morphology in the Whole Brain

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  • Downloaded 405 times
  • Download rankings, all-time:
    • Site-wide: 23,964 out of 62,102
    • In neuroscience: 4,062 out of 11,072
  • Year to date:
    • Site-wide: 6,500 out of 62,102
  • Since beginning of last month:
    • Site-wide: 18,874 out of 62,102

Local processing of visual information in neurites of VGluT3-expressing amacrine cells

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  • Downloaded 343 times
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    • Site-wide: 28,428 out of 62,102
    • In neuroscience: 4,880 out of 11,072
  • Year to date:
    • Site-wide: 56,985 out of 62,102
  • Since beginning of last month:
    • Site-wide: 45,974 out of 62,102

Cell-nonautonomous local and systemic responses to cell arrest enable long-bone catch-up growth

developmental biology more details view paper
  • Downloaded 334 times
  • Download rankings, all-time:
    • Site-wide: 29,170 out of 62,102
    • In developmental biology: 809 out of 1,844
  • Year to date:
    • Site-wide: 57,999 out of 62,102
  • Since beginning of last month:
    • Site-wide: 46,286 out of 62,102

A bestiary of genetic mouse lines and related tools for inducible and reversible intersectional misexpression

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  • Downloaded 3 times
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    • Site-wide: 60,464 out of 62,102
    • In molecular biology: 1,863 out of 1,939
  • Year to date:
    • Site-wide: 60,411 out of 62,102
  • Since beginning of last month:
    • Site-wide: 45,039 out of 62,102

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