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Author: Juri Rappsilber

Rankings

  • All-time downloads: 30,780 (rank: 4,975 )
  • Categories:
    • biochemistry: 9,139 (rank: 184 )
    • bioinformatics: 1,185 (rank: 12,305 (tie) )
    • biophysics: 246 (rank: 16,558 (tie) )
    • cell biology: 5,372 (rank: 680 )
    • immunology: 270 (rank: 25,088 (tie) )
    • molecular biology: 11,861 (rank: 182 )
    • synthetic biology: 533 (rank: 3,358 (tie) )
    • systems biology: 2,174 (rank: 1,907 )

Downloads per author, site-wide

Preprints

In-cell architecture of an actively transcribing-translating expressome

molecular biology more details view paper
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    • Site-wide: 3,015
    • In molecular biology: 65
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    • Site-wide: 24,550
  • Since beginning of last month:
    • Site-wide: 31,688

An integrated workflow for cross-linking/mass spectrometry

biochemistry more details view paper
  • Downloaded 2,736 times
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    • Site-wide: 4,761
    • In biochemistry: 77
  • Year to date:
    • Site-wide: 22,401
  • Since beginning of last month:
    • Site-wide: 21,883

A Structure-Based Mechanism for DNA Entry into the Cohesin Ring

molecular biology more details view paper
  • Downloaded 2,391 times
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    • Site-wide: 5,807
    • In molecular biology: 129
  • Year to date:
    • Site-wide: 32,540
  • Since beginning of last month:
    • Site-wide: 37,220

Cross-linking/Mass Spectrometry: A Community-Wide, Comparative Study Towards Establishing Best Practice Guidelines

biochemistry more details view paper
  • Downloaded 1,441 times
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    • Site-wide: 12,245
    • In biochemistry: 236
  • Year to date:
    • Site-wide: 44,078
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    • Site-wide: 44,067

A folded conformation of MukBEF and Cohesin

molecular biology more details view paper
  • Downloaded 1,370 times
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    • Site-wide: 13,261
    • In molecular biology: 360
  • Year to date:
    • Site-wide: 99,122
  • Since beginning of last month:
    • Site-wide: 92,864

Quantitative cross-linking/mass spectrometry reveals subtle protein conformational changes

biochemistry more details view paper
  • Downloaded 1,044 times
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    • Site-wide: 19,875
    • In biochemistry: 421
  • Year to date:
    • Site-wide: 79,331
  • Since beginning of last month:
    • Site-wide: 81,451

Identification of RNA-associated peptides, iRAP, defines precise sites of protein-RNA interaction

molecular biology more details view paper
  • Downloaded 991 times
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    • Site-wide: 21,397
    • In molecular biology: 571
  • Year to date:
    • Site-wide: 29,149
  • Since beginning of last month:
    • Site-wide: 33,697

Defining the RNA Interactome by Total RNA-Associated Protein Purification

cell biology more details view paper
  • Downloaded 974 times
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    • Site-wide: 21,925
    • In cell biology: 761
  • Year to date:
    • Site-wide: 131,307
  • Since beginning of last month:
    • Site-wide: 130,711

Stress-induced translation inhibition through rapid displacement of scanning initiation factors

cell biology more details view paper
  • Downloaded 965 times
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    • Site-wide: 22,243
    • In cell biology: 780
  • Year to date:
    • Site-wide: 34,377
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    • Site-wide: 40,546

The human proteome co-regulation map reveals functional relationships between proteins

systems biology more details view paper
  • Downloaded 951 times
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    • Site-wide: 22,725
    • In systems biology: 466
  • Year to date:
    • Site-wide: 77,299
  • Since beginning of last month:
    • Site-wide: 104,725

Sequential digestion with Trypsin and Elastase in cross-linking/mass spectrometry

biochemistry more details view paper
  • Downloaded 883 times
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    • Site-wide: 25,359
    • In biochemistry: 579
  • Year to date:
    • Site-wide: 41,947
  • Since beginning of last month:
    • Site-wide: 40,061

Cryo-EM reveals the complex architecture of dynactin's shoulder and pointed end

molecular biology more details view paper
  • Downloaded 751 times
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    • Site-wide: 31,749
    • In molecular biology: 896
  • Year to date:
    • Site-wide: 28,827
  • Since beginning of last month:
    • Site-wide: 34,561

Quantitative cross-linking/mass spectrometry using isotope-labeled cross-linkers and MaxQuant

biochemistry more details view paper
  • Downloaded 747 times
  • Download rankings, all-time:
    • Site-wide: 31,966
    • In biochemistry: 758
  • Year to date:
    • Site-wide: 79,334
  • Since beginning of last month:
    • Site-wide: 58,756

RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination

molecular biology more details view paper
  • Downloaded 677 times
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    • Site-wide: 36,555
    • In molecular biology: 1,024
  • Year to date:
    • Site-wide: 93,508
  • Since beginning of last month:
    • Site-wide: 109,901

Swr1 mediated H2A.Z/Pht1 incorporation designates centromere DNA for de novo CENP-A/Cnp1 assembly

cell biology more details view paper
  • Downloaded 644 times
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    • Site-wide: 39,025
    • In cell biology: 1,591
  • Year to date:
    • Site-wide: 53,912
  • Since beginning of last month:
    • Site-wide: 59,597

xiView: A common platform for the downstream analysis of Crosslinking Mass Spectrometry data

molecular biology more details view paper
  • Downloaded 629 times
  • Download rankings, all-time:
    • Site-wide: 40,209
    • In molecular biology: 1,144
  • Year to date:
    • Site-wide: 42,078
  • Since beginning of last month:
    • Site-wide: 41,915

Nano Random Forests to mine protein complexes and their relationships in quantitative proteomics data

cell biology more details view paper
  • Downloaded 609 times
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    • Site-wide: 41,906
    • In cell biology: 1,737
  • Year to date:
    • Site-wide: 110,982
  • Since beginning of last month:
    • Site-wide: 131,326

Reliable identification of protein-protein interactions by crosslinking mass spectrometry

systems biology more details view paper
  • Downloaded 576 times
  • Download rankings, all-time:
    • Site-wide: 44,910
    • In systems biology: 1,030
  • Year to date:
    • Site-wide: 29,771
  • Since beginning of last month:
    • Site-wide: 26,023

In-Search Assignment of Monoisotopic Peaks Improves the Identification of Cross-Linked Peptides

bioinformatics more details view paper
  • Downloaded 541 times
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    • Site-wide: 48,523
    • In bioinformatics: 5,053
  • Year to date:
    • Site-wide: 88,189
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    • Site-wide: 97,999

Laboratory evolution of Escherichia coli enables life based on fluorinated amino acids

synthetic biology more details view paper
  • Downloaded 533 times
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    • Site-wide: 49,373
    • In synthetic biology: 604
  • Year to date:
    • Site-wide: 61,938
  • Since beginning of last month:
    • Site-wide: 59,426

Structure of complement C3(H2O) revealed by quantitative cross-linking/mass spectrometry and modeling

biochemistry more details view paper
  • Downloaded 520 times
  • Download rankings, all-time:
    • Site-wide: 50,825
    • In biochemistry: 1,319
  • Year to date:
    • Site-wide: 94,959
  • Since beginning of last month:
    • Site-wide: 72,430

Architecture of TAF11/TAF13/TBP complex suggests novel regulatory state in General Transcription Factor TFIID function

biochemistry more details view paper
  • Downloaded 474 times
  • Download rankings, all-time:
    • Site-wide: 56,495
    • In biochemistry: 1,482
  • Year to date:
    • Site-wide: 116,365
  • Since beginning of last month:
    • Site-wide: 110,608

The proteomic landscape of centromeric chromatin reveals an essential role for the Ctf19CCAN complex in meiotic kinetochore assembly

cell biology more details view paper
  • Downloaded 470 times
  • Download rankings, all-time:
    • Site-wide: 57,108
    • In cell biology: 2,498
  • Year to date:
    • Site-wide: 66,471
  • Since beginning of last month:
    • Site-wide: 70,815

Blind testing cross-linking/mass spectrometry under the auspices of the 11th critical assessment of methods of protein structure prediction (CASP11)

biochemistry more details view paper
  • Downloaded 446 times
  • Download rankings, all-time:
    • Site-wide: 60,295
    • In biochemistry: 1,609
  • Year to date:
    • Site-wide: 117,252
  • Since beginning of last month:
    • Site-wide: 113,894

treeClust improves protein co-regulation analysis due to robust selectivity for close linear relationships

systems biology more details view paper
  • Downloaded 416 times
  • Download rankings, all-time:
    • Site-wide: 64,748
    • In systems biology: 1,551
  • Year to date:
    • Site-wide: 106,365
  • Since beginning of last month:
    • Site-wide: 104,803

Fission yeast NDR/LATS kinase Orb6 regulates exocytosis via phosphorylation of exocyst complex

cell biology more details view paper
  • Downloaded 395 times
  • Download rankings, all-time:
    • Site-wide: 68,043
    • In cell biology: 3,078
  • Year to date:
    • Site-wide: 134,352
  • Since beginning of last month:
    • Site-wide: 129,625

Nucleosomal Asymmetry Shapes Histone Mark Binding and Promotes Poising at Bivalent Domains

molecular biology more details view paper
  • Downloaded 387 times
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    • Site-wide: 69,482
    • In molecular biology: 2,026
  • Year to date:
    • Site-wide: 4,698
  • Since beginning of last month:
    • Site-wide: 7,133

Substrate Specificity of the TRAMP Nuclear Surveillance Complexes

molecular biology more details view paper
  • Downloaded 379 times
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    • Site-wide: 70,659
    • In molecular biology: 2,071
  • Year to date:
    • Site-wide: 78,821
  • Since beginning of last month:
    • Site-wide: 90,998

Proteomics Using Protease Alternatives to Trypsin Benefits from Sequential Digestion with Trypsin

biochemistry more details view paper
  • Downloaded 354 times
  • Download rankings, all-time:
    • Site-wide: 75,246
    • In biochemistry: 2,079
  • Year to date:
    • Site-wide: 57,093
  • Since beginning of last month:
    • Site-wide: 48,130

Hap2-Ino80 facilitated transcription promotes de novo establishment of CENP-A chromatin

molecular biology more details view paper
  • Downloaded 342 times
  • Download rankings, all-time:
    • Site-wide: 77,537
    • In molecular biology: 2,271
  • Year to date:
    • Site-wide: 121,289
  • Since beginning of last month:
    • Site-wide: 127,949

Exportin Crm1 is repurposed as a docking protein to generate microtubule organizing centers at the nuclear pore

cell biology more details view paper
  • Downloaded 340 times
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    • Site-wide: 77,938
    • In cell biology: 3,580
  • Year to date:
    • Site-wide: 130,790
  • Since beginning of last month:
    • Site-wide: 116,882

Structural Basis for CAL1-Mediated Centromere Maintenance

biochemistry more details view paper
  • Downloaded 330 times
  • Download rankings, all-time:
    • Site-wide: 79,769
    • In biochemistry: 2,260
  • Year to date:
    • Site-wide: 107,721
  • Since beginning of last month:
    • Site-wide: 95,914

The C-terminal helix of BubR1 is essential for CENP-E-dependent chromosome alignment

cell biology more details view paper
  • Downloaded 322 times
  • Download rankings, all-time:
    • Site-wide: 81,311
    • In cell biology: 3,773
  • Year to date:
    • Site-wide: 121,935
  • Since beginning of last month:
    • Site-wide: 120,148

False discovery rate estimation and heterobifunctional cross-linkers

bioinformatics more details view paper
  • Downloaded 281 times
  • Download rankings, all-time:
    • Site-wide: 89,927
    • In bioinformatics: 7,959
  • Year to date:
    • Site-wide: 109,621
  • Since beginning of last month:
    • Site-wide: 112,997

Architecture of the Mto1/2 microtubule nucleation complex

cell biology more details view paper
  • Downloaded 272 times
  • Download rankings, all-time:
    • Site-wide: 91,973
    • In cell biology: 4,260
  • Year to date:
    • Site-wide: 90,221
  • Since beginning of last month:
    • Site-wide: 83,531

STING Nuclear Partners Contribute to Innate Immune Signalling Responses

immunology more details view paper
  • Downloaded 270 times
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    • Site-wide: 92,458
    • In immunology: 2,611
  • Year to date:
    • Site-wide: 17,004
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    • Site-wide: 15,310

Non-covalently-associated peptides are observed during liquid chromatography-mass spectrometry and affect crosslink analyses

bioinformatics more details view paper
  • Downloaded 249 times
  • Download rankings, all-time:
    • Site-wide: 96,893
    • In bioinformatics: 8,413
  • Year to date:
    • Site-wide: 116,553
  • Since beginning of last month:
    • Site-wide: 101,450

Megadalton-sized dityrosine aggregates of α-synuclein retain high degrees of structural disorder and internal dynamics.

biophysics more details view paper
  • Downloaded 246 times
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    • Site-wide: 97,633
    • In biophysics: 3,770
  • Year to date:
    • Site-wide: 134,535
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    • Site-wide: 127,234

Ultraviolet Photodissociation of tryptic peptide backbones at 213 nm

systems biology more details view paper
  • Downloaded 231 times
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    • Site-wide: 100,994
    • In systems biology: 2,335
  • Year to date:
    • Site-wide: 78,577
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    • Site-wide: 77,392

Isolation of protein N-terminal peptides by charge-mediated position- elective enrichment using strong cation exchange chromatography

cell biology more details view paper
  • Downloaded 200 times
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    • Site-wide: 107,963
    • In cell biology: 5,006
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    • Site-wide: 76,152
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A systematic analysis of Trypanosoma brucei chromatin factors identifies novel protein interaction networks associated with sites of transcription initiation and termination

molecular biology more details view paper
  • Downloaded 183 times
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    • Site-wide: 111,756
    • In molecular biology: 3,343
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    • Site-wide: 13,512
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    • Site-wide: 8,532

Non-redundant functions of H2A.Z.1 and H2A.Z.2 in chromosome segregation and cell cycle progression

cell biology more details view paper
  • Downloaded 181 times
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    • Site-wide: 112,093
    • In cell biology: 5,173
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    • Site-wide: 113,965
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    • Site-wide: 100,385

Structural insights into Cullin4-RING ubiquitin ligase remodelling by Vpr from simian immunodeficiency viruses

biochemistry more details view paper
  • Downloaded 164 times
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    • Site-wide: 115,728
    • In biochemistry: 3,455
  • Year to date:
    • Site-wide: 15,456
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    • Site-wide: 51,742

Retention Time Prediction Using Neural Networks Increases Identifications in Crosslinking Mass Spectrometry

bioinformatics more details view paper
  • Downloaded 114 times
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    • Site-wide: 125,744
    • In bioinformatics: 10,051
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