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Author: Michael S. Barker

Rankings

  • All-time downloads: 11,548 (rank: 21,160 )
  • Categories:
    • bioinformatics: 150 (rank: 43,449 (tie) )
    • evolutionary biology: 8,338 (rank: 310 )
    • genetics: 798 (rank: 20,501 (tie) )
    • genomics: 740 (rank: 30,960 (tie) )
    • plant biology: 1,222 (rank: 3,736 (tie) )
    • zoology: 300 (rank: 2,291 (tie) )

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Preprints

Most Compositae (Asteraceae) are descendants of a paleohexaploid and all share a paleotetraploid ancestor with the Calyceraceae

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Multiple large-scale gene and genome duplications during the evolution of hexapods

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Diverse genome organization following 13 independent mesopolyploid events in Brassicaceae contrasts with convergent patterns of gene retention

evolutionary biology more details view paper
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Genomic inferences of domestication events are corroborated by written records in Brassica rapa

genetics more details view paper
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Inferring putative ancient whole genome duplications in the 1000 Plants (1KP) initiative: access to gene family phylogenies and age distributions

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Chromosome-scale inference of hybrid speciation and admixture with convolutional neural networks

evolutionary biology more details view paper
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Inferring the Demographic History of Inbred Species from Genome-Wide SNP Frequency Data

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Genes derived from ancient polyploidy have higher genetic diversity and are associated with domestication in Brassica rapa

plant biology more details view paper
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Polyploid plants have faster rates of multivariate climatic niche evolution than their diploid relatives

evolutionary biology more details view paper
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Polyploidy increases overall diversity despite higher turnover than diploids in the Brassicaceae

evolutionary biology more details view paper
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Phylogeny and Multiple Independent Whole-Genome Duplication Events in the Brassicales

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The contributions from the progenitor genomes of the mesopolyploid Brassiceae are evolutionarily distinct but functionally compatible

genomics more details view paper
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Nuclear Genome Size is Positively Correlated with Mean LTR Insertion Date in Fern and Lycophyte Genomes

evolutionary biology more details view paper
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Genome size evolution in the diverse insect order Trichoptera

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Underwater CAM photosynthesis elucidated by Isoetes genome

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Animal chromosome counts reveal similar range of chromosome numbers but with less polyploidy in animals compared to flowering plants

zoology more details view paper
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Broad variation in rates of polyploidy and dysploidy across flowering plants is correlated with lineage diversification

evolutionary biology more details view paper
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Progress Towards Plant Community Transcriptomics: Pilot RNA-Seq Data from 24 Species of Vascular Plants at Harvard Forest

genomics more details view paper
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TagSeq for gene expression in non-model plants: a pilot study at the Santa Rita Experimental Range NEON core site

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Applying Machine Learning to Classify the Origins of Gene Duplications

bioinformatics more details view paper
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