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Author: Gil McVean

Rankings

  • All-time downloads: 79,779 (rank: 1,971 )
  • Categories:
    • bioinformatics: 24,657 (rank: 136 )
    • epidemiology: 783 (rank: 12,805 (tie) )
    • evolutionary biology: 5,475 (rank: 566 )
    • genetics: 29,923 (rank: 216 )
    • genomics: 17,176 (rank: 903 )
    • immunology: 436 (rank: 22,601 (tie) )
    • infectious diseases: 1,329 (rank: 21,979 (tie) )

Downloads per author, site-wide

Preprints

Genome-wide genetic data on ~500,000 UK Biobank participants

genetics more details view paper
  • Downloaded 19,894 times
  • Download rankings, all-time:
    • Site-wide: 397
    • In genetics: 7
  • Year to date:
    • Site-wide: 1,405
  • Since beginning of last month:
    • Site-wide: 12,879

Genome Graphs

bioinformatics more details view paper
  • Downloaded 9,410 times
  • Download rankings, all-time:
    • Site-wide: 1,017
    • In bioinformatics: 51
  • Year to date:
    • Site-wide: 8,543
  • Since beginning of last month:
    • Site-wide: 3,585

Real-time search of all bacterial and viral genomic data

bioinformatics more details view paper
  • Downloaded 6,137 times
  • Download rankings, all-time:
    • Site-wide: 1,784
    • In bioinformatics: 117
  • Year to date:
    • Site-wide: 51,541
  • Since beginning of last month:
    • Site-wide: 84,793

Genome variation and meiotic recombination in Plasmodium falciparum: insights from deep sequencing of genetic crosses

genomics more details view paper
  • Downloaded 3,757 times
  • Download rankings, all-time:
    • Site-wide: 3,544
    • In genomics: 370
  • Year to date:
    • Site-wide: 47,922
  • Since beginning of last month:
    • Site-wide: 10,684

Improved genome inference in the MHC using a population reference graph

genomics more details view paper
  • Downloaded 3,456 times
  • Download rankings, all-time:
    • Site-wide: 3,972
    • In genomics: 409
  • Year to date:
    • Site-wide: 76,626
  • Since beginning of last month:
    • Site-wide: None

Inferring the ancestry of everyone

evolutionary biology more details view paper
  • Downloaded 3,338 times
  • Download rankings, all-time:
    • Site-wide: 4,174
    • In evolutionary biology: 76
  • Year to date:
    • Site-wide: 38,457
  • Since beginning of last month:
    • Site-wide: 48,136

Rapid antibiotic resistance predictions from genome sequence data for S. aureus and M. tuberculosis.

genomics more details view paper
  • Downloaded 3,294 times
  • Download rankings, all-time:
    • Site-wide: 4,256
    • In genomics: 438
  • Year to date:
    • Site-wide: 104,743
  • Since beginning of last month:
    • Site-wide: None

Dating genomic variants and shared ancestry in population-scale sequencing data

genomics more details view paper
  • Downloaded 3,252 times
  • Download rankings, all-time:
    • Site-wide: 4,326
    • In genomics: 449
  • Year to date:
    • Site-wide: 64,732
  • Since beginning of last month:
    • Site-wide: 92,207

Practical Use of Methods for Imputation of HLA Alleles from SNP Genotype Data

genetics more details view paper
  • Downloaded 2,956 times
  • Download rankings, all-time:
    • Site-wide: 4,948
    • In genetics: 205
  • Year to date:
    • Site-wide: 16,724
  • Since beginning of last month:
    • Site-wide: None

A reference dataset of 5.4 million phased human variants validated by genetic inheritance from sequencing a three-generation 17-member pedigree

bioinformatics more details view paper
  • Downloaded 2,874 times
  • Download rankings, all-time:
    • Site-wide: 5,145
    • In bioinformatics: 519
  • Year to date:
    • Site-wide: 114,865
  • Since beginning of last month:
    • Site-wide: None

A natural encoding of genetic variation in a Burrows-Wheeler Transform to enable mapping and genome inference

bioinformatics more details view paper
  • Downloaded 2,419 times
  • Download rankings, all-time:
    • Site-wide: 6,646
    • In bioinformatics: 723
  • Year to date:
    • Site-wide: 46,801
  • Since beginning of last month:
    • Site-wide: 6,224

A unified genealogy of modern and ancient genomes

genomics more details view paper
  • Downloaded 2,399 times
  • Download rankings, all-time:
    • Site-wide: 6,737
    • In genomics: 716
  • Year to date:
    • Site-wide: 990
  • Since beginning of last month:
    • Site-wide: 20,519

New insights into malaria susceptibility from the genomes of 17,000 individuals from Africa, Asia, and Oceania

genetics more details view paper
  • Downloaded 1,761 times
  • Download rankings, all-time:
    • Site-wide: 10,600
    • In genetics: 470
  • Year to date:
    • Site-wide: 54,742
  • Since beginning of last month:
    • Site-wide: 77,338

Bayesian analysis of genetic association across tree-structured routine healthcare data in the UK Biobank

genetics more details view paper
  • Downloaded 1,725 times
  • Download rankings, all-time:
    • Site-wide: 10,928
    • In genetics: 483
  • Year to date:
    • Site-wide: 122,669
  • Since beginning of last month:
    • Site-wide: None

Systematic classification of shared components of genetic risk for common human diseases

genetics more details view paper
  • Downloaded 1,562 times
  • Download rankings, all-time:
    • Site-wide: 12,584
    • In genetics: 571
  • Year to date:
    • Site-wide: 87,051
  • Since beginning of last month:
    • Site-wide: 84,167

Integrating long-range connectivity information into de Bruijn graphs

bioinformatics more details view paper
  • Downloaded 1,445 times
  • Download rankings, all-time:
    • Site-wide: 14,182
    • In bioinformatics: 1,648
  • Year to date:
    • Site-wide: 118,782
  • Since beginning of last month:
    • Site-wide: None

Identification of host-pathogen-disease relationships using a scalable Multiplex Serology platform in UK Biobank

infectious diseases more details view paper
  • Downloaded 1,329 times
  • Download rankings, all-time:
    • Site-wide: 16,102
    • In infectious diseases: 1,727
  • Year to date:
    • Site-wide: 22,087
  • Since beginning of last month:
    • Site-wide: 59,209

Stable recombination hotspots in birds

evolutionary biology more details view paper
  • Downloaded 1,103 times
  • Download rankings, all-time:
    • Site-wide: 21,210
    • In evolutionary biology: 832
  • Year to date:
    • Site-wide: 110,126
  • Since beginning of last month:
    • Site-wide: None

Coupling Wright-Fisher and coalescent dynamics for realistic simulation of population-scale datasets

evolutionary biology more details view paper
  • Downloaded 1,034 times
  • Download rankings, all-time:
    • Site-wide: 23,339
    • In evolutionary biology: 964
  • Year to date:
    • Site-wide: 77,913
  • Since beginning of last month:
    • Site-wide: 22,460

The impact of age on genetic risk for common diseases

genetics more details view paper
  • Downloaded 1,023 times
  • Download rankings, all-time:
    • Site-wide: 23,658
    • In genetics: 1,083
  • Year to date:
    • Site-wide: 12,838
  • Since beginning of last month:
    • Site-wide: 41,013

Deconvolution of multiple infections in Plasmodium falciparum from high throughput sequencing data

bioinformatics more details view paper
  • Downloaded 968 times
  • Download rankings, all-time:
    • Site-wide: 25,743
    • In bioinformatics: 2,930
  • Year to date:
    • Site-wide: 142,120
  • Since beginning of last month:
    • Site-wide: None

HLA*PRG:LA - HLA typing from linearly projected graph alignments

bioinformatics more details view paper
  • Downloaded 789 times
  • Download rankings, all-time:
    • Site-wide: 34,296
    • In bioinformatics: 3,776
  • Year to date:
    • Site-wide: 97,965
  • Since beginning of last month:
    • Site-wide: 92,998

The origins and relatedness structure of mixed infections vary with local prevalence of P. falciparum malaria

epidemiology more details view paper
  • Downloaded 783 times
  • Download rankings, all-time:
    • Site-wide: 34,644
    • In epidemiology: 1,781
  • Year to date:
    • Site-wide: 109,981
  • Since beginning of last month:
    • Site-wide: 87,887

Mapping the drivers of within-host pathogen evolution using massive data sets

genetics more details view paper
  • Downloaded 629 times
  • Download rankings, all-time:
    • Site-wide: 46,441
    • In genetics: 2,076
  • Year to date:
    • Site-wide: 146,689
  • Since beginning of last month:
    • Site-wide: None

Detection of simple and complex de novo mutations without, with, or with multiple reference sequences

bioinformatics more details view paper
  • Downloaded 615 times
  • Download rankings, all-time:
    • Site-wide: 47,783
    • In bioinformatics: 4,965
  • Year to date:
    • Site-wide: 120,262
  • Since beginning of last month:
    • Site-wide: 98,017

High trait variability in optimal polygenic prediction strategy within multiple-ancestry cohorts

genomics more details view paper
  • Downloaded 593 times
  • Download rankings, all-time:
    • Site-wide: 49,907
    • In genomics: 3,844
  • Year to date:
    • Site-wide: 6,726
  • Since beginning of last month:
    • Site-wide: 69,445

Parental-fetal interplay of immune genes leads to intrauterine growth restriction

immunology more details view paper
  • Downloaded 436 times
  • Download rankings, all-time:
    • Site-wide: 71,084
    • In immunology: 2,108
  • Year to date:
    • Site-wide: 10,640
  • Since beginning of last month:
    • Site-wide: 41,976

Elucidating relationships between P.falciparum prevalence and measures of genetic diversity with a combined genetic-epidemiological model of malaria

genomics more details view paper
  • Downloaded 425 times
  • Download rankings, all-time:
    • Site-wide: 72,910
    • In genomics: 4,977
  • Year to date:
    • Site-wide: 44,517
  • Since beginning of last month:
    • Site-wide: 25,601

Selfish mutations dysregulating RAS-MAPK signaling are pervasive in aged human testes

genetics more details view paper
  • Downloaded 373 times
  • Download rankings, all-time:
    • Site-wide: 82,329
    • In genetics: 3,597
  • Year to date:
    • Site-wide: 124,488
  • Since beginning of last month:
    • Site-wide: 85,880

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