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Author: Zhandong Liu

Rankings

  • All-time downloads: 15,730 (rank: 14,896 (tie) )
  • Categories:
    • bioinformatics: 4,704 (rank: 2,994 (tie) )
    • cancer biology: 1,383 (rank: 6,738 (tie) )
    • genetics: 989 (rank: 17,276 (tie) )
    • genomics: 1,828 (rank: 14,475 (tie) )
    • molecular biology: 679 (rank: 11,349 (tie) )
    • neuroscience: 2,049 (rank: 13,075 )
    • systems biology: 4,098 (rank: 1,046 )

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Preprints

Meta-analysis of the human brain transcriptome identifies heterogeneity across human AD coexpression modules robust to sample collection and methodological approach

systems biology more details view paper
  • Downloaded 2,655 times
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    • Site-wide: 6,283
    • In systems biology: 99
  • Year to date:
    • Site-wide: 31,099
  • Since beginning of last month:
    • Site-wide: 44,537

CRISPRCloud2: A cloud-based platform for deconvoluting CRISPR screen data

bioinformatics more details view paper
  • Downloaded 1,414 times
  • Download rankings, all-time:
    • Site-wide: 15,962
    • In bioinformatics: 1,811
  • Year to date:
    • Site-wide: 63,660
  • Since beginning of last month:
    • Site-wide: 103,590

Functional dissection of Alzheimer's disease brain gene expression signatures in humans and mouse models

systems biology more details view paper
  • Downloaded 1,206 times
  • Download rankings, all-time:
    • Site-wide: 20,247
    • In systems biology: 381
  • Year to date:
    • Site-wide: 84,735
  • Since beginning of last month:
    • Site-wide: 120,381

XMRF: An R package to Fit Markov Networks to High-Throughput Genetics Data

bioinformatics more details view paper
  • Downloaded 903 times
  • Download rankings, all-time:
    • Site-wide: 30,924
    • In bioinformatics: 3,430
  • Year to date:
    • Site-wide: 149,304
  • Since beginning of last month:
    • Site-wide: 152,931

Co-expression enrichment analysis at the single-cell level reveals convergent defects in neural progenitor cells and their cell-type transitions in neurodevelopmental disorders

genetics more details view paper
  • Downloaded 885 times
  • Download rankings, all-time:
    • Site-wide: 31,900
    • In genetics: 1,427
  • Year to date:
    • Site-wide: 143,337
  • Since beginning of last month:
    • Site-wide: 137,591

Synergy of chemotherapy and macrophage depletion leads to B cell-mediated T cell memory activation and durable triple negative breast cancer regression

cancer biology more details view paper
  • Downloaded 876 times
  • Download rankings, all-time:
    • Site-wide: 32,375
    • In cancer biology: 854
  • Year to date:
    • Site-wide: 5,491
  • Since beginning of last month:
    • Site-wide: 3,384

Tau-mediated Disruption of the Spliceosome Triggers Cryptic RNA-splicing and Neurodegeneration in Alzheimer's Disease

neuroscience more details view paper
  • Downloaded 812 times
  • Download rankings, all-time:
    • Site-wide: 36,004
    • In neuroscience: 4,755
  • Year to date:
    • Site-wide: 102,230
  • Since beginning of last month:
    • Site-wide: 120,453

Bias toward long gene misregulation in synaptic disorders can be an artefact of amplification-based methods

neuroscience more details view paper
  • Downloaded 805 times
  • Download rankings, all-time:
    • Site-wide: 36,466
    • In neuroscience: 4,841
  • Year to date:
    • Site-wide: 147,110
  • Since beginning of last month:
    • Site-wide: 152,063

SAVE: A secure cloud-based pipeline for CRISPR pooled screen deconvolution

bioinformatics more details view paper
  • Downloaded 732 times
  • Download rankings, all-time:
    • Site-wide: 41,606
    • In bioinformatics: 4,411
  • Year to date:
    • Site-wide: 154,918
  • Since beginning of last month:
    • Site-wide: 156,044

Epigenetic Drift of H3K27me3 in Aging Links Glycolysis to Healthy Longevity

molecular biology more details view paper
  • Downloaded 679 times
  • Download rankings, all-time:
    • Site-wide: 46,159
    • In molecular biology: 1,308
  • Year to date:
    • Site-wide: 120,897
  • Since beginning of last month:
    • Site-wide: 84,040

On the Reproducibility of TCGA Ovarian Cancer MicroRNA Profiles

genomics more details view paper
  • Downloaded 575 times
  • Download rankings, all-time:
    • Site-wide: 57,188
    • In genomics: 4,224
  • Year to date:
    • Site-wide: 158,187
  • Since beginning of last month:
    • Site-wide: 155,200

Integrated analysis of the aging brain transcriptome and proteome in tauopathy

genomics more details view paper
  • Downloaded 559 times
  • Download rankings, all-time:
    • Site-wide: 59,041
    • In genomics: 4,332
  • Year to date:
    • Site-wide: 114,137
  • Since beginning of last month:
    • Site-wide: 114,843

Molecular profiling predicts meningioma recurrence and reveals loss of DREAM complex repression in aggressive tumors

cancer biology more details view paper
  • Downloaded 507 times
  • Download rankings, all-time:
    • Site-wide: 66,192
    • In cancer biology: 1,917
  • Year to date:
    • Site-wide: 151,089
  • Since beginning of last month:
    • Site-wide: 153,043

PRIME: a probabilistic imputation method to reduce dropout effects in single cell RNA sequencing

bioinformatics more details view paper
  • Downloaded 482 times
  • Download rankings, all-time:
    • Site-wide: 70,170
    • In bioinformatics: 6,626
  • Year to date:
    • Site-wide: 102,891
  • Since beginning of last month:
    • Site-wide: 93,274

Partial loss of CFIm25 causes aberrant alternative polyadenylation and learning deficits

genomics more details view paper
  • Downloaded 434 times
  • Download rankings, all-time:
    • Site-wide: 78,438
    • In genomics: 5,211
  • Year to date:
    • Site-wide: 90,235
  • Since beginning of last month:
    • Site-wide: 72,246

Loss of Dnmt3a dependent methylation in inhibitory neurons impairs neural function through a mechanism that impacts Rett syndrome

neuroscience more details view paper
  • Downloaded 432 times
  • Download rankings, all-time:
    • Site-wide: 78,833
    • In neuroscience: 11,620
  • Year to date:
    • Site-wide: 120,515
  • Since beginning of last month:
    • Site-wide: 117,729

A network regularized linear model to infer spatial expression pattern for singlecells

bioinformatics more details view paper
  • Downloaded 404 times
  • Download rankings, all-time:
    • Site-wide: 84,260
    • In bioinformatics: 7,573
  • Year to date:
    • Site-wide: 17,625
  • Since beginning of last month:
    • Site-wide: 37,156

Missing-value imputation and in silico region detection for spatially resolved transcriptomics

bioinformatics more details view paper
  • Downloaded 290 times
  • Download rankings, all-time:
    • Site-wide: 110,259
    • In bioinformatics: 9,207
  • Year to date:
    • Site-wide: 28,333
  • Since beginning of last month:
    • Site-wide: 22,835

Genome-Wide Association Study Meta-Analysis for Parkinson Disease Motor Subtypes

genomics more details view paper
  • Downloaded 260 times
  • Download rankings, all-time:
    • Site-wide: 118,015
    • In genomics: 6,654
  • Year to date:
    • Site-wide: 100,661
  • Since beginning of last month:
    • Site-wide: 100,759

A comparative study of deconvolution methods for RNA-seq data under a dynamic testing landscape

bioinformatics more details view paper
  • Downloaded 253 times
  • Download rankings, all-time:
    • Site-wide: 119,749
    • In bioinformatics: 9,758
  • Year to date:
    • Site-wide: 62,505
  • Since beginning of last month:
    • Site-wide: 84,064

Modulating glial genes involved in synaptic function mitigates pathogenesis and behavioral deficits in a Drosophila model of Huntington's Disease

systems biology more details view paper
  • Downloaded 237 times
  • Download rankings, all-time:
    • Site-wide: 124,090
    • In systems biology: 2,694
  • Year to date:
    • Site-wide: 94,278
  • Since beginning of last month:
    • Site-wide: 87,374

TraceQC: An R package for quality control of CRISPR lineage tracing data

bioinformatics more details view paper
  • Downloaded 226 times
  • Download rankings, all-time:
    • Site-wide: 126,906
    • In bioinformatics: 10,149
  • Year to date:
    • Site-wide: 98,265
  • Since beginning of last month:
    • Site-wide: 75,743

ModelMatcher: A scientist-centric online platform to facilitate collaborations between stakeholders of rare and undiagnosed disease research

genetics more details view paper
  • Downloaded 104 times
  • Download rankings, all-time:
    • Site-wide: 153,989
    • In genetics: 5,964
  • Year to date:
    • Site-wide: 87,210
  • Since beginning of last month:
    • Site-wide: 11,580

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