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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 59,937 bioRxiv papers from 266,417 authors.

Author: Gordon Dougan

Rankings

  • All-time downloads: 10,392 (rank: 3,505 out of 266,417)
  • Categories:
    • bioinformatics: 3,090 (rank: 2,064 out of 23,749)
    • genomics: 4,554 (rank: 2,688 (tie) out of 31,149)
    • immunology: 1,331 (rank: 755 out of 11,754)
    • microbiology: 845 (rank: 3,961 (tie) out of 27,244)
    • molecular biology: 572 (rank: 3,587 (tie) out of 12,015)

Downloads per author, site-wide

Preprints

Shared genetic effects on chromatin and gene expression reveal widespread enhancer priming in immune response

genomics more details view paper
  • Downloaded 3,248 times
  • Download rankings, all-time:
    • Site-wide: 886 out of 59,937
    • In genomics: 229 out of 4,159
  • Year to date:
    • Site-wide: 13,416 out of 59,937
  • Since beginning of last month:
    • Site-wide: 24,301 out of 59,937

Simultaneously inferring T cell fate and clonality from single cell transcriptomes

bioinformatics more details view paper
  • Downloaded 2,567 times
  • Download rankings, all-time:
    • Site-wide: 1,364 out of 59,937
    • In bioinformatics: 271 out of 6,051
  • Year to date:
    • Site-wide: 27,221 out of 59,937
  • Since beginning of last month:
    • Site-wide: 30,250 out of 59,937

High-throughput phenotyping reveals expansive genetic and structural underpinnings of immune variation

immunology more details view paper
  • Downloaded 633 times
  • Download rankings, all-time:
    • Site-wide: 13,417 out of 59,937
    • In immunology: 223 out of 1,454
  • Year to date:
    • Site-wide: 2,823 out of 59,937
  • Since beginning of last month:
    • Site-wide: 5,108 out of 59,937

Emergence of carbapenem, beta-lactamase inhibitor and cefoxitin resistant lineages from a background of ESBL-producing Klebsiella pneumoniae and K. quasipneumoniae highlights different evolutionary mechanisms

genomics more details view paper
  • Downloaded 532 times
  • Download rankings, all-time:
    • Site-wide: 16,947 out of 59,937
    • In genomics: 2,100 out of 4,159
  • Year to date:
    • Site-wide: 16,490 out of 59,937
  • Since beginning of last month:
    • Site-wide: 28,040 out of 59,937

PlasmidTron: assembling the cause of phenotypes from NGS data

bioinformatics more details view paper
  • Downloaded 523 times
  • Download rankings, all-time:
    • Site-wide: 17,298 out of 59,937
    • In bioinformatics: 2,647 out of 6,051
  • Year to date:
    • Site-wide: 48,587 out of 59,937
  • Since beginning of last month:
    • Site-wide: 52,464 out of 59,937

More than 16,000 effectors in the Legionella genus genome provide multiple, independent combinations for replication in human cells

genomics more details view paper
  • Downloaded 521 times
  • Download rankings, all-time:
    • Site-wide: 17,393 out of 59,937
    • In genomics: 2,132 out of 4,159
  • Year to date:
    • Site-wide: 17,796 out of 59,937
  • Since beginning of last month:
    • Site-wide: 15,533 out of 59,937

Rora regulates activated T helper cells during inflammation

immunology more details view paper
  • Downloaded 396 times
  • Download rankings, all-time:
    • Site-wide: 23,933 out of 59,937
    • In immunology: 424 out of 1,454
  • Year to date:
    • Site-wide: 6,190 out of 59,937
  • Since beginning of last month:
    • Site-wide: 775 out of 59,937

Diagnostic host gene signature to accurately distinguish enteric fever from other febrile diseases

molecular biology more details view paper
  • Downloaded 311 times
  • Download rankings, all-time:
    • Site-wide: 30,337 out of 59,937
    • In molecular biology: 849 out of 1,842
  • Year to date:
    • Site-wide: 24,952 out of 59,937
  • Since beginning of last month:
    • Site-wide: 29,884 out of 59,937

Exclusive dependence of IL-10Rα signalling on intestinal microbiota homeostasis and control of whipworm infection

immunology more details view paper
  • Downloaded 302 times
  • Download rankings, all-time:
    • Site-wide: 31,197 out of 59,937
    • In immunology: 594 out of 1,454
  • Year to date:
    • Site-wide: 21,204 out of 59,937
  • Since beginning of last month:
    • Site-wide: 4,114 out of 59,937

Salmonella Typhi survives in human macrophages by neutralizing the RAB32/BLOC-3 host-defence pathway

microbiology more details view paper
  • Downloaded 270 times
  • Download rankings, all-time:
    • Site-wide: 34,175 out of 59,937
    • In microbiology: 2,185 out of 4,778
  • Year to date:
    • Site-wide: 11,495 out of 59,937
  • Since beginning of last month:
    • Site-wide: 11,871 out of 59,937

Laboratory and Molecular Surveillance of Paediatric Typhoidal Salmonella in Nepal: Antimicrobial Resistance and Implications for Vaccine Policy

molecular biology more details view paper
  • Downloaded 261 times
  • Download rankings, all-time:
    • Site-wide: 35,094 out of 59,937
    • In molecular biology: 1,007 out of 1,842
  • Year to date:
    • Site-wide: 50,980 out of 59,937
  • Since beginning of last month:
    • Site-wide: 23,895 out of 59,937

Population structure and antimicrobial resistance patterns of Salmonella Typhi isolates in Bangladesh from 2004 to 2016

genomics more details view paper
  • Downloaded 253 times
  • Download rankings, all-time:
    • Site-wide: 36,013 out of 59,937
    • In genomics: 3,257 out of 4,159
  • Year to date:
    • Site-wide: 12,680 out of 59,937
  • Since beginning of last month:
    • Site-wide: 2,935 out of 59,937

Genetic variation associated with infection and the environment in the accidental pathogen Burkholderia pseudomallei

microbiology more details view paper
  • Downloaded 188 times
  • Download rankings, all-time:
    • Site-wide: 43,483 out of 59,937
    • In microbiology: 2,999 out of 4,778
  • Year to date:
    • Site-wide: 18,895 out of 59,937
  • Since beginning of last month:
    • Site-wide: 23,069 out of 59,937

Discovery of a Pseudomonas aeruginosa Type VI secretion system toxin targeting bacterial protein synthesis using a global genomics approach

microbiology more details view paper
  • Downloaded 168 times
  • Download rankings, all-time:
    • Site-wide: 45,984 out of 59,937
    • In microbiology: 3,270 out of 4,778
  • Year to date:
    • Site-wide: 21,639 out of 59,937
  • Since beginning of last month:
    • Site-wide: 1,494 out of 59,937

Phylogenomic analysis of Clostridium perfringens identifies isogenic strains in gastroenteritis outbreaks, and novel virulence-related features

microbiology more details view paper
  • Downloaded 135 times
  • Download rankings, all-time:
    • Site-wide: 50,341 out of 59,937
    • In microbiology: 3,684 out of 4,778
  • Year to date:
    • Site-wide: 27,467 out of 59,937
  • Since beginning of last month:
    • Site-wide: 20,109 out of 59,937

Genomic analysis on broiler-associated Clostridium perfringens strains and caecal microbiome profiling reveals key factors linked to poultry Necrotic Enteritis

microbiology more details view paper
  • Downloaded 84 times
  • Download rankings, all-time:
    • Site-wide: 56,239 out of 59,937
    • In microbiology: 4,329 out of 4,778
  • Year to date:
    • Site-wide: 41,384 out of 59,937
  • Since beginning of last month:
    • Site-wide: 14,726 out of 59,937

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