Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 70,235 bioRxiv papers from 306,680 authors.

Author: Xi Chen

ORCiD: http://orcid.org/0000-0003-1998-8461
Most recently observed institution: RootPath

Rankings

All-time downloads: 34,645 (rank: 537 out of 306,655)
Categories:
- biochemistry: 109 (rank: 11,473 (tie) out of 12,353)
- bioinformatics: 9,613 (rank: 365 out of 26,739)
- cancer biology: 3,503 (rank: 437 (tie) out of 19,865)
- cell biology: 1,496 (rank: 1,771 (tie) out of 21,165)
- epidemiology: 2,347 (rank: 342 out of 9,539)
- evolutionary biology: 2,517 (rank: 853 (tie) out of 16,504)
- genomics: 5,276 (rank: 2,638 out of 34,697)
- immunology: 4,903 (rank: 128 out of 14,634)
- microbiology: 176 (rank: 23,949 (tie) out of 31,654)
- molecular biology: 309 (rank: 8,156 (tie) out of 14,954)
- neuroscience: 2,605 (rank: 3,933 (tie) out of 51,767)
- plant biology: 219 (rank: 8,328 (tie) out of 11,184)
- synthetic biology: 1,173 (rank: 730 (tie) out of 3,070)
- systems biology: 399 (rank: 5,244 (tie) out of 9,233)

Downloads per author, site-wide

Preprints

A rapid and robust method for single cell chromatin accessibility profiling

genomics more details view paper

Downloaded 5,276 times
Download rankings, all-time:
- Site-wide: 416 out of 70,235
- In genomics: 109 out of 4,700
Year to date:
- Site-wide: 19,113 out of 70,235
Since beginning of last month:
- Site-wide: 6,474 out of 70,235

Unsupervised clustering and epigenetic classification of single cells

bioinformatics more details view paper

Downloaded 3,337 times
Download rankings, all-time:
- Site-wide: 1,006 out of 70,235
- In bioinformatics: 197 out of 6,887
Year to date:
- Site-wide: 28,187 out of 70,235
Since beginning of last month:
- Site-wide: 33,368 out of 70,235

Genome-wide CRISPR screens in T helper cells reveal pervasive cross-talk between activation and differentiation

immunology more details view paper

Downloaded 3,090 times
Download rankings, all-time:
- Site-wide: 1,180 out of 70,235
- In immunology: 16 out of 1,805
Year to date:
- Site-wide: 35,848 out of 70,235
Since beginning of last month:
- Site-wide: 21,347 out of 70,235

Single-cell RNA sequencing reveals a dynamic stromal niche within the evolving tumour microenvironment

cancer biology more details view paper

Downloaded 2,886 times
Download rankings, all-time:
- Site-wide: 1,338 out of 70,235
- In cancer biology: 37 out of 2,389
Year to date:
- Site-wide: 3,585 out of 70,235
Since beginning of last month:
- Site-wide: 1,677 out of 70,235

Detection of complex structural variation from paired-end sequencing data

bioinformatics more details view paper

Downloaded 2,542 times
Download rankings, all-time:
- Site-wide: 1,659 out of 70,235
- In bioinformatics: 331 out of 6,887
Year to date:
- Site-wide: 7,012 out of 70,235
Since beginning of last month:
- Site-wide: 10,850 out of 70,235

Gene expression variability across cells and species shapes innate immunity

evolutionary biology more details view paper

Downloaded 2,517 times
Download rankings, all-time:
- Site-wide: 1,698 out of 70,235
- In evolutionary biology: 72 out of 4,612
Year to date:
- Site-wide: 16,785 out of 70,235
Since beginning of last month:
- Site-wide: 17,481 out of 70,235

Assessing real-time Zika risk in the United States

epidemiology more details view paper

Downloaded 1,914 times
Download rankings, all-time:
- Site-wide: 2,740 out of 70,235
- In epidemiology: 26 out of 1,556
Year to date:
- Site-wide: 14,343 out of 70,235
Since beginning of last month:
- Site-wide: 11,219 out of 70,235

Transcriptome Dynamics Reveals Progressive Transition from Effector to Memory in CD4+ T cells.

immunology more details view paper

Downloaded 1,311 times
Download rankings, all-time:
- Site-wide: 5,222 out of 70,235
- In immunology: 79 out of 1,805
Year to date:
- Site-wide: 37,106 out of 70,235
Since beginning of last month:
- Site-wide: 4,572 out of 70,235

Scalable volumetric imaging for ultrahigh-speed brain mapping at synaptic resolution

neuroscience more details view paper

Downloaded 1,183 times
Download rankings, all-time:
- Site-wide: 6,206 out of 70,235
- In neuroscience: 976 out of 12,633
Year to date:
- Site-wide: 4,708 out of 70,235
Since beginning of last month:
- Site-wide: 8,506 out of 70,235

Evaluating Protein Transfer Learning with TAPE

synthetic biology more details view paper

Downloaded 1,173 times
Download rankings, all-time:
- Site-wide: 6,306 out of 70,235
- In synthetic biology: 96 out of 666
Year to date:
- Site-wide: 1,692 out of 70,235
Since beginning of last month:
- Site-wide: 741 out of 70,235

The IRE1a-XBP1 pathway promotes T helper cell differentiation by resolving secretory stress and accelerating proliferation

cell biology more details view paper

Downloaded 1,172 times
Download rankings, all-time:
- Site-wide: 6,310 out of 70,235
- In cell biology: 195 out of 3,429
Year to date:
- Site-wide: 34,740 out of 70,235
Since beginning of last month:
- Site-wide: 13,987 out of 70,235

Mocap: Large-scale inference of transcription factor binding sites from chromatin accessibility

bioinformatics more details view paper

Downloaded 947 times
Download rankings, all-time:
- Site-wide: 8,966 out of 70,235
- In bioinformatics: 1,553 out of 6,887
Year to date:
- Site-wide: 41,530 out of 70,235
Since beginning of last month:
- Site-wide: 67,794 out of 70,235

pathwayPCA: an R package for integrative pathway analysis with modern PCA methodology and gene selection

bioinformatics more details view paper

Downloaded 707 times
Download rankings, all-time:
- Site-wide: 13,962 out of 70,235
- In bioinformatics: 2,252 out of 6,887
Year to date:
- Site-wide: 22,403 out of 70,235
Since beginning of last month:
- Site-wide: 19,691 out of 70,235

Integrative analysis of single cell genomics data by coupled nonnegative matrix factorizations

bioinformatics more details view paper

Downloaded 576 times
Download rankings, all-time:
- Site-wide: 18,654 out of 70,235
- In bioinformatics: 2,793 out of 6,887
Year to date:
- Site-wide: 66,438 out of 70,235
Since beginning of last month:
- Site-wide: 42,376 out of 70,235

Rap2 and TNIK control Plexin-dependent synaptic tiling in C. elegans

neuroscience more details view paper

Downloaded 530 times
Download rankings, all-time:
- Site-wide: 20,802 out of 70,235
- In neuroscience: 3,517 out of 12,633
Year to date:
- Site-wide: 25,738 out of 70,235
Since beginning of last month:
- Site-wide: 43,678 out of 70,235

Rora regulates activated T helper cells during inflammation

immunology more details view paper

Downloaded 502 times
Download rankings, all-time:
- Site-wide: 22,260 out of 70,235
- In immunology: 424 out of 1,805
Year to date:
- Site-wide: 21,232 out of 70,235
Since beginning of last month:
- Site-wide: 21,678 out of 70,235

12h-clock control of central dogma information flow by XBP1s

systems biology more details view paper

Downloaded 399 times
Download rankings, all-time:
- Site-wide: 29,054 out of 70,235
- In systems biology: 872 out of 1,936
Year to date:
- Site-wide: 19,016 out of 70,235
Since beginning of last month:
- Site-wide: 9,138 out of 70,235

Cholecystokinin release triggered by presynaptic NMDA receptors produces LTP and sound-sound associative memory formation

neuroscience more details view paper

Downloaded 385 times
Download rankings, all-time:
- Site-wide: 30,293 out of 70,235
- In neuroscience: 5,232 out of 12,633
Year to date:
- Site-wide: 41,855 out of 70,235
Since beginning of last month:
- Site-wide: 61,559 out of 70,235

Knowledge-guided analysis of 'omics' data using the KnowEnG cloud platform

cancer biology more details view paper

Downloaded 337 times
Download rankings, all-time:
- Site-wide: 34,711 out of 70,235
- In cancer biology: 1,087 out of 2,389
Year to date:
- Site-wide: 44,375 out of 70,235
Since beginning of last month:
- Site-wide: 27,395 out of 70,235

Quantitative Real-Time Imaging of Glutathione with Sub-Cellular Resolution

cell biology more details view paper

Downloaded 324 times
Download rankings, all-time:
- Site-wide: 35,974 out of 70,235
- In cell biology: 1,724 out of 3,429
Year to date:
- Site-wide: 22,841 out of 70,235
Since beginning of last month:
- Site-wide: 41,549 out of 70,235

Dual indexed design of in-Drop single-cell RNA-seq libraries improves sequencing quality and throughput

molecular biology more details view paper

Downloaded 309 times
Download rankings, all-time:
- Site-wide: 37,477 out of 70,235
- In molecular biology: 1,117 out of 2,260
Year to date:
- Site-wide: 4,123 out of 70,235
Since beginning of last month:
- Site-wide: 12,659 out of 70,235

coMethDMR: Accurate identification of co-methylated and differentially methylated regions in epigenome-wide association studies

bioinformatics more details view paper

Downloaded 301 times
Download rankings, all-time:
- Site-wide: 38,314 out of 70,235
- In bioinformatics: 4,660 out of 6,887
Year to date:
- Site-wide: 55,442 out of 70,235
Since beginning of last month:
- Site-wide: 47,741 out of 70,235

Disentangling the contribution of childhood and adulthood circumstances and genetics to phenotypic aging: prospective cohort study

epidemiology more details view paper

Downloaded 293 times
Download rankings, all-time:
- Site-wide: 39,151 out of 70,235
- In epidemiology: 654 out of 1,556
Year to date:
- Site-wide: 47,957 out of 70,235
Since beginning of last month:
- Site-wide: 62,026 out of 70,235

Growth Factor Independent 1 is a tumor suppressor gene in colorectal cancer

cancer biology more details view paper

Downloaded 280 times
Download rankings, all-time:
- Site-wide: 40,745 out of 70,235
- In cancer biology: 1,278 out of 2,389
Year to date:
- Site-wide: 19,317 out of 70,235
Since beginning of last month:
- Site-wide: 10,787 out of 70,235

Unconsciously Implanted Visuoauditory Memory in the Presence of Cholecystokinin Retrieved in Behavioral Contexts

neuroscience more details view paper

Downloaded 254 times
Download rankings, all-time:
- Site-wide: 43,908 out of 70,235
- In neuroscience: 7,743 out of 12,633
Year to date:
- Site-wide: 20,205 out of 70,235
Since beginning of last month:
- Site-wide: 66,404 out of 70,235

MassComp, a lossless compressor for mass spectrometry data

bioinformatics more details view paper

Downloaded 251 times
Download rankings, all-time:
- Site-wide: 44,193 out of 70,235
- In bioinformatics: 5,124 out of 6,887
Year to date:
- Site-wide: 64,257 out of 70,235
Since beginning of last month:
- Site-wide: 36,917 out of 70,235

ChIP-BIT2: a software tool to detect weak binding events using a Bayesian integration approach

bioinformatics more details view paper

Downloaded 221 times
Download rankings, all-time:
- Site-wide: 48,244 out of 70,235
- In bioinformatics: 5,415 out of 6,887
Year to date:
- Site-wide: None out of 70,235
Since beginning of last month:
- Site-wide: 65,603 out of 70,235

Alternative splicing and translation play important roles in parallel with transcriptional regulation during rice hypoxic germination

plant biology more details view paper

Downloaded 219 times
Download rankings, all-time:
- Site-wide: 48,549 out of 70,235
- In plant biology: 1,401 out of 2,062
Year to date:
- Site-wide: 38,686 out of 70,235
Since beginning of last month:
- Site-wide: 62,189 out of 70,235

The effects of modified sialic acids on mucus and erythrocytes on influenza A virus HA and NA functions

microbiology more details view paper

Downloaded 176 times
Download rankings, all-time:
- Site-wide: 54,709 out of 70,235
- In microbiology: 4,015 out of 5,693
Year to date:
- Site-wide: 7,531 out of 70,235
Since beginning of last month:
- Site-wide: 16,766 out of 70,235

Bayesian inference of differentially expressed transcripts and their abundance from multi-condition RNA-seq data

bioinformatics more details view paper

Downloaded 167 times
Download rankings, all-time:
- Site-wide: 56,050 out of 70,235
- In bioinformatics: 6,007 out of 6,887
Year to date:
- Site-wide: 51,385 out of 70,235
Since beginning of last month:
- Site-wide: 53,596 out of 70,235

MSIGNET: a Metropolis sampling-based method for global optimal significant network identification

bioinformatics more details view paper

Downloaded 161 times
Download rankings, all-time:
- Site-wide: 57,009 out of 70,235
- In bioinformatics: 6,069 out of 6,887
Year to date:
- Site-wide: 60,420 out of 70,235
Since beginning of last month:
- Site-wide: 37,465 out of 70,235

BICORN: An R package for integrative inference of de novo cis-regulatory modules

bioinformatics more details view paper

Downloaded 147 times
Download rankings, all-time:
- Site-wide: 59,113 out of 70,235
- In bioinformatics: 6,202 out of 6,887
Year to date:
- Site-wide: 55,268 out of 70,235
Since beginning of last month:
- Site-wide: 53,975 out of 70,235

Impact of Prior Cancer on Outcomes in Nasopharyngeal Carcinoma

epidemiology more details view paper

Downloaded 140 times
Download rankings, all-time:
- Site-wide: 60,218 out of 70,235
- In epidemiology: 1,296 out of 1,556
Year to date:
- Site-wide: 52,240 out of 70,235
Since beginning of last month:
- Site-wide: 57,170 out of 70,235

GIP: A Gene network-based integrative approach for Inferring disease-associated signaling Pathways

bioinformatics more details view paper

Downloaded 131 times
Download rankings, all-time:
- Site-wide: 61,438 out of 70,235
- In bioinformatics: 6,368 out of 6,887
Year to date:
- Site-wide: 51,381 out of 70,235
Since beginning of last month:
- Site-wide: 54,710 out of 70,235

Dopaminergic Neurodegeneration Induced by Parkinson's Disease-Linked G2019S LRRK2 is Dependent on Kinase and GTPase Activity

neuroscience more details view paper

Downloaded 127 times
Download rankings, all-time:
- Site-wide: 62,019 out of 70,235
- In neuroscience: 11,113 out of 12,633
Year to date:
- Site-wide: 4,080 out of 70,235
Since beginning of last month:
- Site-wide: 2,180 out of 70,235

Retrieval Practice Facilitates Judgments of Learning Through Multiple Mechanisms

neuroscience more details view paper

Downloaded 126 times
Download rankings, all-time:
- Site-wide: 62,171 out of 70,235
- In neuroscience: 11,124 out of 12,633
Year to date:
- Site-wide: 42,106 out of 70,235
Since beginning of last month:
- Site-wide: 57,222 out of 70,235

ChIP-GSM: cell type-specific cis-regulatory module inference for active regulatory element prediction

bioinformatics more details view paper

Downloaded 125 times
Download rankings, all-time:
- Site-wide: 62,272 out of 70,235
- In bioinformatics: 6,403 out of 6,887
Year to date:
- Site-wide: 57,943 out of 70,235
Since beginning of last month:
- Site-wide: 59,742 out of 70,235

Selectivity and engineering of the sialoglycan-binding spectrum in Siglec-like adhesins

biochemistry more details view paper

Downloaded 109 times
Download rankings, all-time:
- Site-wide: 64,377 out of 70,235
- In biochemistry: 1,889 out of 2,105
Year to date:
- Site-wide: 29,984 out of 70,235
Since beginning of last month:
- Site-wide: 60,953 out of 70,235

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