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Author: Sarah A. Teichmann

Rankings

  • All-time downloads: 105,225 (rank: 266 out of 396,022)
  • Categories:
    • biochemistry: 264 (rank: 12,483 (tie) out of 18,570)
    • bioinformatics: 12,682 (rank: 385 out of 33,607)
    • cancer biology: 4,287 (rank: 499 out of 27,516)
    • cell biology: 21,518 (rank: 5 out of 29,647)
    • developmental biology: 10,257 (rank: 32 out of 15,375)
    • evolutionary biology: 2,657 (rank: 1,148 (tie) out of 20,242)
    • genomics: 27,389 (rank: 278 out of 42,086)
    • immunology: 21,799 (rank: 135 out of 22,232)
    • molecular biology: 1,525 (rank: 2,176 (tie) out of 20,860)
    • systems biology: 2,847 (rank: 928 (tie) out of 11,555)

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Preprints

The Human Cell Atlas

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Power Analysis of Single Cell RNA‐Sequencing Experiments

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A rapid and robust method for single cell chromatin accessibility profiling

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CellPhoneDB v2.0: Inferring cell-cell communication from combined expression of multi-subunit receptor-ligand complexes

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Single cell transcriptomics of regulatory T cells reveals trajectories of tissue adaptation

immunology more details view paper
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Assessment of batch-correction methods for scRNA-seq data with a new test metric

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Cardelino: Integrating whole exomes and single-cell transcriptomes to reveal phenotypic impact of somatic variants

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Single-cell RNA sequencing reveals a dynamic stromal niche within the evolving tumour microenvironment

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Fast Batch Alignment of Single Cell Transcriptomes Unifies Multiple Mouse Cell Atlases into an Integrated Landscape

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Reconstructing the human first trimester fetal-maternal interface using single cell transcriptomics

developmental biology more details view paper
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A cell atlas of human thymic development defines T cell repertoire formation

immunology more details view paper
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Genome-wide CRISPR screens in T helper cells reveal pervasive cross-talk between activation and differentiation

immunology more details view paper
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Decoding the development of the blood and immune systems during human fetal liver haematopoiesis

developmental biology more details view paper
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Cells and gene expression programs in the adult human heart

genomics more details view paper
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SpatialDE - Identification of spatially variable genes

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Temporal mixture modelling of single-cell RNA-seq data resolves a CD4+ T cell fate bifurcation

systems biology more details view paper
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Simultaneously inferring T cell fate and clonality from single cell transcriptomes

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Gene expression variability across cells and species shapes innate immunity

evolutionary biology more details view paper
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Single-cell transcriptomics identifies CD44 as a new marker and regulator of haematopoietic stem cells development

developmental biology more details view paper
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Establishment In Culture Of Expanded Potential Stem Cells

developmental biology more details view paper
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Transcriptome Dynamics Reveals Progressive Transition from Effector to Memory in CD4+ T cells.

immunology more details view paper
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Distinct microbial and immune niches of the human colon

immunology more details view paper
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Single-cell sequencing of developing human gut reveals transcriptional links to childhood Crohns disease

cell biology more details view paper
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Antibody repertoire and gene expression dynamics of diverse human B cell states during affinity maturation.

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BraCeR: Reconstruction of B-cell receptor sequences and clonality inference from single-cell RNA-sequencing

bioinformatics more details view paper
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The IRE1a-XBP1 pathway promotes T helper cell differentiation by resolving secretory stress and accelerating proliferation

cell biology more details view paper
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Unbiased classification of mosquito blood cells by single-cell genomics and high-content imaging

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Comparative analysis of sequencing technologies platforms for single-cell transcriptomics

genomics more details view paper
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Tumors induce de novo steroid biosynthesis in T cells to evade immunity

immunology more details view paper
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Single-cell transcriptome analysis of fish immune cells provides insight into the evolution of vertebrate immunity

immunology more details view paper
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Single cell profiling of immature human postnatal thymocytes resolves the complexity of intra-thymic lineage differentiation and thymus seeding precursors.

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Cell-type specialization in the brain is encoded by specific long-range chromatin topologies

molecular biology more details view paper
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Rora regulates activated T helper cells during inflammation

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Mosquito cellular immunity at single-cell resolution

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INSIGHT: a scalable isothermal NASBA-based platform for COVID-19 diagnosis

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Cotranslational assembly imposes evolutionary constraints on homomeric proteins

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Flipping between Polycomb repressed and active transcriptional states introduces noise in gene expression

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Single cell transcriptional characterization of human megakaryocyte lineage commitment and maturation

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Tumor to normal single cell mRNA comparisons reveal a pan-neuroblastoma cancer cell

cancer biology more details view paper
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CLICK-enabled analogues reveal pregnenolone interactomes in cancer and immune cells

biochemistry more details view paper
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Single-cell transcriptomics of allo-reactive CD4+ T cells over time reveals divergent fates during gut GVHD

immunology more details view paper
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