Rxivist logo

Author: Erez Lieberman Aiden

Rankings

  • All-time downloads: 68,635 (rank: 3,578 )
  • Categories:
    • bioinformatics: 1,250 (rank: 18,509 (tie) )
    • biophysics: 2,234 (rank: 3,621 )
    • cell biology: 2,183 (rank: 5,529 (tie) )
    • epidemiology: 295 (rank: 36,343 (tie) )
    • evolutionary biology: 3,470 (rank: 2,148 (tie) )
    • genetic and genomic medicine: 1,168 (rank: 6,241 (tie) )
    • genetics: 13,358 (rank: 1,462 (tie) )
    • genomics: 42,078 (rank: 328 )
    • molecular biology: 2,070 (rank: 3,979 (tie) )

Downloads per author, site-wide

Preprints

Activity-by-Contact model of enhancer specificity from thousands of CRISPR perturbations

genetics more details view paper
  • Downloaded 10,191 times
  • Download rankings, all-time:
    • Site-wide: 1,343
    • In genetics: 26
  • Year to date:
    • Site-wide: 19,256
  • Since beginning of last month:
    • Site-wide: 14,895

A rapid, low cost, and highly sensitive SARS-CoV-2 diagnostic based on whole genome sequencing

genomics more details view paper
  • Downloaded 10,162 times
  • Download rankings, all-time:
    • Site-wide: 1,348
    • In genomics: 84
  • Year to date:
    • Site-wide: 8,351
  • Since beginning of last month:
    • Site-wide: 14,948

The Juicebox Assembly Tools module facilitates de novo assembly of mammalian genomes with chromosome-length scaffolds for under $1000

genomics more details view paper
  • Downloaded 6,715 times
  • Download rankings, all-time:
    • Site-wide: 2,342
    • In genomics: 174
  • Year to date:
    • Site-wide: 6,365
  • Since beginning of last month:
    • Site-wide: 6,001

Genetic determinants of co-accessible chromatin regions in T cell activation across humans

genomics more details view paper
  • Downloaded 5,266 times
  • Download rankings, all-time:
    • Site-wide: 3,266
    • In genomics: 276
  • Year to date:
    • Site-wide: 111,509
  • Since beginning of last month:
    • Site-wide: 174,624

Cohesin Loss Eliminates All Loop Domains, Leading To Links Among Superenhancers And Downregulation Of Nearby Genes

genomics more details view paper
  • Downloaded 5,250 times
  • Download rankings, all-time:
    • Site-wide: 3,279
    • In genomics: 279
  • Year to date:
    • Site-wide: 147,619
  • Since beginning of last month:
    • Site-wide: 143,361

Improved Aedes aegypti mosquito reference genome assembly enables biological discovery and vector control

genomics more details view paper
  • Downloaded 3,950 times
  • Download rankings, all-time:
    • Site-wide: 4,891
    • In genomics: 446
  • Year to date:
    • Site-wide: 112,940
  • Since beginning of last month:
    • Site-wide: 61,098

Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling

genetics more details view paper
  • Downloaded 3,199 times
  • Download rankings, all-time:
    • Site-wide: 6,677
    • In genetics: 234
  • Year to date:
    • Site-wide: 182,818
  • Since beginning of last month:
    • Site-wide: 119,632

A Cell Type-Specific Class of Chromatin Loops Anchored at Large DNA Methylation Nadirs

genomics more details view paper
  • Downloaded 2,257 times
  • Download rankings, all-time:
    • Site-wide: 11,196
    • In genomics: 1,031
  • Year to date:
    • Site-wide: 14,225
  • Since beginning of last month:
    • Site-wide: 59,394

Polycomb-Mediated Chromatin Loops Revealed by a Sub-Kilobase Resolution Chromatin Interaction Map

molecular biology more details view paper
  • Downloaded 2,075 times
  • Download rankings, all-time:
    • Site-wide: 12,704
    • In molecular biology: 303
  • Year to date:
    • Site-wide: 145,936
  • Since beginning of last month:
    • Site-wide: 152,502

Static And Dynamic DNA Loops Form AP-1 Bound Activation Hubs During Macrophage Development

genomics more details view paper
  • Downloaded 1,873 times
  • Download rankings, all-time:
    • Site-wide: 14,851
    • In genomics: 1,332
  • Year to date:
    • Site-wide: 160,956
  • Since beginning of last month:
    • Site-wide: 149,277

The Hi-Culfite assay reveals relationships between chromatin contacts and DNA methylation state

genomics more details view paper
  • Downloaded 1,414 times
  • Download rankings, all-time:
    • Site-wide: 23,165
    • In genomics: 2,020
  • Year to date:
    • Site-wide: 82,896
  • Since beginning of last month:
    • Site-wide: 59,293

Convergent selection on juvenile hormone signaling is associated with the evolution of eusociality in bees

evolutionary biology more details view paper
  • Downloaded 1,393 times
  • Download rankings, all-time:
    • Site-wide: 23,724
    • In evolutionary biology: 818
  • Year to date:
    • Site-wide: 5,580
  • Since beginning of last month:
    • Site-wide: 7,835

ESCO1 and CTCF enable formation of long chromatin loops by protecting cohesinSTAG1 from WAPL

cell biology more details view paper
  • Downloaded 1,268 times
  • Download rankings, all-time:
    • Site-wide: 27,575
    • In cell biology: 976
  • Year to date:
    • Site-wide: 155,882
  • Since beginning of last month:
    • Site-wide: 192,734

Chromosome size affects sequence divergence between species through the interplay of recombination and selection

evolutionary biology more details view paper
  • Downloaded 1,205 times
  • Download rankings, all-time:
    • Site-wide: 29,848
    • In evolutionary biology: 1,053
  • Year to date:
    • Site-wide: 126,422
  • Since beginning of last month:
    • Site-wide: 83,071

Balanced chromosomal rearrangements offer insights into coding and noncoding genomic features associated with developmental disorders

genetic and genomic medicine more details view paper
  • Downloaded 1,192 times
  • Download rankings, all-time:
    • Site-wide: 30,387
    • In genetic and genomic medicine: 192
  • Year to date:
    • Site-wide: 11,997
  • Since beginning of last month:
    • Site-wide: 14,618

CTCF looping is established during gastrulation in medaka embryos

genomics more details view paper
  • Downloaded 974 times
  • Download rankings, all-time:
    • Site-wide: 41,560
    • In genomics: 3,169
  • Year to date:
    • Site-wide: 118,483
  • Since beginning of last month:
    • Site-wide: 209,647

Chromosome-length genome assembly and structural variations of the primal Basenji dog (Canis lupus familiaris) genome

genomics more details view paper
  • Downloaded 966 times
  • Download rankings, all-time:
    • Site-wide: 42,101
    • In genomics: 3,255
  • Year to date:
    • Site-wide: 48,992
  • Since beginning of last month:
    • Site-wide: 34,089

Limited evidence for parallel evolution among desert adapted Peromyscus deer mice

evolutionary biology more details view paper
  • Downloaded 934 times
  • Download rankings, all-time:
    • Site-wide: 44,290
    • In evolutionary biology: 1,762
  • Year to date:
    • Site-wide: 127,411
  • Since beginning of last month:
    • Site-wide: 160,326

MCPH1 inhibits condensin II during interphase by regulating its SMC2-kleisin interface.

cell biology more details view paper
  • Downloaded 930 times
  • Download rankings, all-time:
    • Site-wide: 44,599
    • In cell biology: 1,792
  • Year to date:
    • Site-wide: 75,790
  • Since beginning of last month:
    • Site-wide: 49,808

A Transferable Model For Chromosome Architecture

biophysics more details view paper
  • Downloaded 866 times
  • Download rankings, all-time:
    • Site-wide: 49,812
    • In biophysics: 1,582
  • Year to date:
    • Site-wide: 146,661
  • Since beginning of last month:
    • Site-wide: 179,019

Hi-C yields chromosome-length scaffolds for a legume genome, Trifolium subterraneum

genomics more details view paper
  • Downloaded 858 times
  • Download rankings, all-time:
    • Site-wide: 50,475
    • In genomics: 3,709
  • Year to date:
    • Site-wide: 61,400
  • Since beginning of last month:
    • Site-wide: 51,538

Exploring Chromosomal Structural Heterogeneity Across Multiple Cell Lines

biophysics more details view paper
  • Downloaded 845 times
  • Download rankings, all-time:
    • Site-wide: 51,714
    • In biophysics: 1,667
  • Year to date:
    • Site-wide: 120,135
  • Since beginning of last month:
    • Site-wide: 161,125

Somatic structural variant formation is guided by and influences genome architecture

genomics more details view paper
  • Downloaded 724 times
  • Download rankings, all-time:
    • Site-wide: 65,007
    • In genomics: 4,502
  • Year to date:
    • Site-wide: 103,686
  • Since beginning of last month:
    • Site-wide: 50,293

Predicting A/B compartments from histone modifications using deep learning

bioinformatics more details view paper
  • Downloaded 691 times
  • Download rankings, all-time:
    • Site-wide: 69,480
    • In bioinformatics: 6,903
  • Year to date:
    • Site-wide: 6,283
  • Since beginning of last month:
    • Site-wide: 18,725

Juicebox.js provides a cloud-based visualization system for Hi-C data

bioinformatics more details view paper
  • Downloaded 603 times
  • Download rankings, all-time:
    • Site-wide: 83,060
    • In bioinformatics: 7,556
  • Year to date:
    • Site-wide: None
  • Since beginning of last month:
    • Site-wide: 59,557

De Novo Prediction of Human Chromosome Structures: Epigenetic Marking Patterns Encode Genome Architecture

biophysics more details view paper
  • Downloaded 531 times
  • Download rankings, all-time:
    • Site-wide: 97,262
    • In biophysics: 3,502
  • Year to date:
    • Site-wide: 164,165
  • Since beginning of last month:
    • Site-wide: 202,017

A chromosome-length genome assembly and annotation of blackberry (Rubus argutus, cv. Hillquist)

genomics more details view paper
  • Downloaded 509 times
  • Download rankings, all-time:
    • Site-wide: 102,194
    • In genomics: 6,344
  • Year to date:
    • Site-wide: 30,711
  • Since beginning of last month:
    • Site-wide: 8,221

Desert Dingo (Canis lupus dingo) genome provides insights into their role in the Australian ecosystem.

genomics more details view paper
  • Downloaded 396 times
  • Download rankings, all-time:
    • Site-wide: 131,279
    • In genomics: 7,165
  • Year to date:
    • Site-wide: 173,642
  • Since beginning of last month:
    • Site-wide: 65,661

De novo chromosome-length assembly of the mule deer (Odocoileus hemionus) genome

genomics more details view paper
  • Downloaded 377 times
  • Download rankings, all-time:
    • Site-wide: 136,716
    • In genomics: 7,391
  • Year to date:
    • Site-wide: 97,160
  • Since beginning of last month:
    • Site-wide: 71,090

Clean lighting leads to decreased indoor air pollution and improved respiratory health in rural Uganda

epidemiology more details view paper
  • Downloaded 300 times
  • Download rankings, all-time:
    • Site-wide: 159,951
    • In epidemiology: 6,504
  • Year to date:
    • Site-wide: 147,499
  • Since beginning of last month:
    • Site-wide: 90,602

Interphase chromosomes of the Aedes aegypti mosquito are liquid crystalline and can sense mechanical cues

genomics more details view paper
  • Downloaded 288 times
  • Download rankings, all-time:
    • Site-wide: 163,480
    • In genomics: 8,280
  • Year to date:
    • Site-wide: 53,567
  • Since beginning of last month:
    • Site-wide: 169,039

A chromosome-length assembly of the Hawaiian Monk seal (Neomonarchus schauinslandi) confirms genomic stability in the Pinnipeds and a prolonged history of "genetic purging"

genomics more details view paper
  • Downloaded 260 times
  • Download rankings, all-time:
    • Site-wide: 171,966
    • In genomics: 8,535
  • Year to date:
    • Site-wide: 54,025
  • Since beginning of last month:
    • Site-wide: 70,126

A Chromosome-length Assembly of the Black Petaltail (Tanypteryx hageni) Dragonfly

genomics more details view paper
  • Downloaded 93 times
  • Download rankings, all-time:
    • Site-wide: 208,661
    • In genomics: 9,456
  • Year to date:
    • Site-wide: 110,149
  • Since beginning of last month:
    • Site-wide: 35,791

Proximity-dependent recruitment of Polycomb Repressive Complexes by the lncRNA Airn

genomics more details view paper
  • Downloaded 80 times
  • Download rankings, all-time:
    • Site-wide: 211,062
    • In genomics: None
  • Year to date:
    • Site-wide: 40,792
  • Since beginning of last month:
    • Site-wide: 3,939

PanLingua

News