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Author: Yijun Ruan

Rankings

  • All-time downloads: 9,366 (rank: 9,788 (tie) out of 424,981)
  • Categories:
    • bioinformatics: 1,915 (rank: 6,348 (tie) out of 36,026)
    • cancer biology: 537 (rank: 11,994 (tie) out of 30,281)
    • genomics: 5,933 (rank: 3,100 (tie) out of 44,345)
    • immunology: 265 (rank: 17,468 (tie) out of 26,030)
    • molecular biology: 716 (rank: 6,142 (tie) out of 23,134)

Downloads per author, site-wide

Preprints

Multiplex Chromatin Interaction Analysis with Single-Molecule Precision

genomics more details view paper
  • Downloaded 2,622 times
  • Download rankings, all-time:
    • Site-wide: 2,591 out of 100,621
    • In genomics: 476 out of 6,233
  • Year to date:
    • Site-wide: 41,616 out of 100,621
  • Since beginning of last month:
    • Site-wide: None out of 100,621

Spatial Chromatin Architecture Alteration by Structural Variations in Human Genomes at Population Scale

genomics more details view paper
  • Downloaded 1,001 times
  • Download rankings, all-time:
    • Site-wide: 12,934 out of 100,621
    • In genomics: 1,737 out of 6,233
  • Year to date:
    • Site-wide: 72,550 out of 100,621
  • Since beginning of last month:
    • Site-wide: None out of 100,621

ChIA-PIPE: A fully automated pipeline for ChIA-PET data analysis and visualization

bioinformatics more details view paper
  • Downloaded 942 times
  • Download rankings, all-time:
    • Site-wide: 14,224 out of 100,621
    • In bioinformatics: 2,202 out of 9,245
  • Year to date:
    • Site-wide: 16,700 out of 100,621
  • Since beginning of last month:
    • Site-wide: None out of 100,621

The Tandem Duplicator Phenotype is a prevalent genome-wide cancer configuration driven by distinct gene mutations

genomics more details view paper
  • Downloaded 742 times
  • Download rankings, all-time:
    • Site-wide: 20,629 out of 100,621
    • In genomics: 2,390 out of 6,233
  • Year to date:
    • Site-wide: 70,094 out of 100,621
  • Since beginning of last month:
    • Site-wide: None out of 100,621

Super resolution imaging of a distinct chromatin loop in human lymphoblastoid cells

molecular biology more details view paper
  • Downloaded 716 times
  • Download rankings, all-time:
    • Site-wide: 21,713 out of 100,621
    • In molecular biology: 699 out of 3,492
  • Year to date:
    • Site-wide: 36,866 out of 100,621
  • Since beginning of last month:
    • Site-wide: None out of 100,621

ChIA-DropBox: a novel analysis and visualization pipeline for multiplex chromatin interactions

bioinformatics more details view paper
  • Downloaded 655 times
  • Download rankings, all-time:
    • Site-wide: 24,767 out of 100,621
    • In bioinformatics: 3,438 out of 9,245
  • Year to date:
    • Site-wide: 27,344 out of 100,621
  • Since beginning of last month:
    • Site-wide: None out of 100,621

EndoC-βH1 multi-genomic profiling defines gene regulatory programs governing human pancreatic β cell identity and function

genomics more details view paper
  • Downloaded 553 times
  • Download rankings, all-time:
    • Site-wide: 31,067 out of 100,621
    • In genomics: 3,131 out of 6,233
  • Year to date:
    • Site-wide: 36,684 out of 100,621
  • Since beginning of last month:
    • Site-wide: 20,649 out of 100,621

Targeting nuclear pore protein, NUP210, reduces metastasis through heterochromatin-mediated silencing of mechanosensitive genes

cancer biology more details view paper
  • Downloaded 537 times
  • Download rankings, all-time:
    • Site-wide: 32,248 out of 100,621
    • In cancer biology: 1,052 out of 3,602
  • Year to date:
    • Site-wide: 6,055 out of 100,621
  • Since beginning of last month:
    • Site-wide: 12,776 out of 100,621

Ultrastructural Visualization of 3D Chromatin Folding Using Serial Block-Face Scanning Electron Microscopy and In Situ Hybridization (3D-EMISH)

genomics more details view paper
  • Downloaded 363 times
  • Download rankings, all-time:
    • Site-wide: 50,187 out of 100,621
    • In genomics: 4,283 out of 6,233
  • Year to date:
    • Site-wide: 11,206 out of 100,621
  • Since beginning of last month:
    • Site-wide: None out of 100,621

Multiplex chromatin interaction analysis by signal processing and statistical algorithms

genomics more details view paper
  • Downloaded 340 times
  • Download rankings, all-time:
    • Site-wide: 53,299 out of 100,621
    • In genomics: 4,410 out of 6,233
  • Year to date:
    • Site-wide: 66,317 out of 100,621
  • Since beginning of last month:
    • Site-wide: None out of 100,621

pyBedGraph: a Python package for fast operations on 1-dimensional genomic signal tracks

bioinformatics more details view paper
  • Downloaded 318 times
  • Download rankings, all-time:
    • Site-wide: 56,540 out of 100,621
    • In bioinformatics: 6,296 out of 9,245
  • Year to date:
    • Site-wide: 70,802 out of 100,621
  • Since beginning of last month:
    • Site-wide: 43,607 out of 100,621

Chromatin Topology Reorganization and Transcription Repression by PML/RARα in Acute Promyeloid Leukemia

genomics more details view paper
  • Downloaded 312 times
  • Download rankings, all-time:
    • Site-wide: 57,541 out of 100,621
    • In genomics: 4,621 out of 6,233
  • Year to date:
    • Site-wide: 14,012 out of 100,621
  • Since beginning of last month:
    • Site-wide: 32,941 out of 100,621

Macrophage mediated recognition and clearance of Borrelia burgdorferi elicits MyD88-dependent and - independent phagosomal signals that contribute to phagocytosis and inflammation

immunology more details view paper
  • Downloaded 265 times
  • Download rankings, all-time:
    • Site-wide: 65,101 out of 100,621
    • In immunology: 1,819 out of 3,123
  • Year to date:
    • Site-wide: 51,403 out of 100,621
  • Since beginning of last month:
    • Site-wide: 36,794 out of 100,621

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