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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 53,027 bioRxiv papers from 245,564 authors.

Author: Eleazar Eskin

Rankings

  • All-time downloads: 47,367 (rank: 250 out of 245,564)
  • Categories:
    • bioinformatics: 15,539 (rank: 98 out of 21,734)
    • genetics: 11,594 (rank: 630 out of 23,769)
    • genomics: 13,187 (rank: 559 out of 28,414)
    • immunology: 3,039 (rank: 157 (tie) out of 9,915)
    • microbiology: 3,287 (rank: 240 (tie) out of 23,861)
    • scientific communication and education: 721 (rank: 604 (tie) out of 1,814)

Downloads per author, site-wide

Preprints

Local genetic effects on gene expression across 44 human tissues

genomics more details view paper
  • Downloaded 4,091 times
  • Download rankings, all-time:
    • Site-wide: 492 out of 53,027
    • In genomics: 133 out of 3,782
  • Year to date:
    • Site-wide: 29,003 out of 53,027
  • Since beginning of last month:
    • Site-wide: 22,126 out of 53,027

Challenges and recommendations to improve the installability and archival stability of omics computational tools

bioinformatics more details view paper
  • Downloaded 4,052 times
  • Download rankings, all-time:
    • Site-wide: 503 out of 53,027
    • In bioinformatics: 101 out of 5,533
  • Year to date:
    • Site-wide: 408 out of 53,027
  • Since beginning of last month:
    • Site-wide: 500 out of 53,027

Computational Pan-Genomics: Status, Promises and Challenges

genomics more details view paper
  • Downloaded 3,922 times
  • Download rankings, all-time:
    • Site-wide: 538 out of 53,027
    • In genomics: 143 out of 3,782
  • Year to date:
    • Site-wide: 10,458 out of 53,027
  • Since beginning of last month:
    • Site-wide: 13,162 out of 53,027

Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia

microbiology more details view paper
  • Downloaded 3,287 times
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    • Site-wide: 751 out of 53,027
    • In microbiology: 14 out of 4,157
  • Year to date:
    • Site-wide: 4,479 out of 53,027
  • Since beginning of last month:
    • Site-wide: 2,955 out of 53,027

Profiling immunoglobulin repertoires across multiple human tissues by RNA Sequencing

immunology more details view paper
  • Downloaded 3,039 times
  • Download rankings, all-time:
    • Site-wide: 869 out of 53,027
    • In immunology: 9 out of 1,225
  • Year to date:
    • Site-wide: 1,765 out of 53,027
  • Since beginning of last month:
    • Site-wide: 3,120 out of 53,027

Comprehensive analysis of RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues

genomics more details view paper
  • Downloaded 2,472 times
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    • Site-wide: 1,256 out of 53,027
    • In genomics: 300 out of 3,782
  • Year to date:
    • Site-wide: 32,575 out of 53,027
  • Since beginning of last month:
    • Site-wide: 33,433 out of 53,027

Distant regulatory effects of genetic variation in multiple human tissues

genomics more details view paper
  • Downloaded 2,414 times
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    • In genomics: 314 out of 3,782
  • Year to date:
    • Site-wide: 15,385 out of 53,027
  • Since beginning of last month:
    • Site-wide: 14,275 out of 53,027

Word and sentence embedding tools to measure semantic similarity of Gene Ontology terms by their definitions

bioinformatics more details view paper
  • Downloaded 2,007 times
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    • Site-wide: 1,834 out of 53,027
    • In bioinformatics: 388 out of 5,533
  • Year to date:
    • Site-wide: 3,467 out of 53,027
  • Since beginning of last month:
    • Site-wide: 6,791 out of 53,027

Review: Population Structure in Genetic Studies: Confounding Factors and Mixed Models

bioinformatics more details view paper
  • Downloaded 1,975 times
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    • Site-wide: 1,891 out of 53,027
    • In bioinformatics: 399 out of 5,533
  • Year to date:
    • Site-wide: 4,587 out of 53,027
  • Since beginning of last month:
    • Site-wide: 12,058 out of 53,027

UMI-Reducer: Collapsing duplicate sequencing reads via Unique Molecular Identifiers

bioinformatics more details view paper
  • Downloaded 1,968 times
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    • Site-wide: 1,901 out of 53,027
    • In bioinformatics: 403 out of 5,533
  • Year to date:
    • Site-wide: 3,976 out of 53,027
  • Since beginning of last month:
    • Site-wide: 7,743 out of 53,027

Widespread allelic heterogeneity in complex traits

genetics more details view paper
  • Downloaded 1,601 times
  • Download rankings, all-time:
    • Site-wide: 2,695 out of 53,027
    • In genetics: 245 out of 3,086
  • Year to date:
    • Site-wide: 44,588 out of 53,027
  • Since beginning of last month:
    • Site-wide: 38,796 out of 53,027

Leveraging molecular QTL to understand the genetic architecture of diseases and complex traits

genetics more details view paper
  • Downloaded 1,430 times
  • Download rankings, all-time:
    • Site-wide: 3,235 out of 53,027
    • In genetics: 298 out of 3,086
  • Year to date:
    • Site-wide: 22,743 out of 53,027
  • Since beginning of last month:
    • Site-wide: 29,831 out of 53,027

Colocalization of GWAS and eQTL Signals Detects Target Genes

genetics more details view paper
  • Downloaded 1,353 times
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    • Site-wide: 3,549 out of 53,027
    • In genetics: 328 out of 3,086
  • Year to date:
    • Site-wide: 32,176 out of 53,027
  • Since beginning of last month:
    • Site-wide: 27,141 out of 53,027

MiCoP: Microbial Community Profiling method for detecting viral and fungal organisms in metagenomic samples

bioinformatics more details view paper
  • Downloaded 1,174 times
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    • Site-wide: 4,450 out of 53,027
    • In bioinformatics: 896 out of 5,533
  • Year to date:
    • Site-wide: 7,579 out of 53,027
  • Since beginning of last month:
    • Site-wide: 4,721 out of 53,027

Spatial localization of recent ancestors for admixed individuals

genetics more details view paper
  • Downloaded 964 times
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    • Site-wide: 6,112 out of 53,027
    • In genetics: 509 out of 3,086
  • Year to date:
    • Site-wide: 45,124 out of 53,027
  • Since beginning of last month:
    • Site-wide: 44,116 out of 53,027

Improved methods for multi-trait fine mapping of pleiotropic risk loci

genetics more details view paper
  • Downloaded 963 times
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    • Site-wide: 6,130 out of 53,027
    • In genetics: 510 out of 3,086
  • Year to date:
    • Site-wide: 37,098 out of 53,027
  • Since beginning of last month:
    • Site-wide: 34,886 out of 53,027

Cell-type-specific resolution epigenetics without the need for cell sorting or single-cell biology

bioinformatics more details view paper
  • Downloaded 935 times
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    • Site-wide: 6,440 out of 53,027
    • In bioinformatics: 1,197 out of 5,533
  • Year to date:
    • Site-wide: 3,991 out of 53,027
  • Since beginning of last month:
    • Site-wide: 1,891 out of 53,027

An Ancestry Based Approach for Detecting Interactions

genetics more details view paper
  • Downloaded 926 times
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    • Site-wide: 6,521 out of 53,027
    • In genetics: 532 out of 3,086
  • Year to date:
    • Site-wide: 41,187 out of 53,027
  • Since beginning of last month:
    • Site-wide: 46,703 out of 53,027

The genetic basis of host choice and resting behavior in the major African malaria vector, Anopheles arabiensis

genetics more details view paper
  • Downloaded 897 times
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    • Site-wide: 6,853 out of 53,027
    • In genetics: 558 out of 3,086
  • Year to date:
    • Site-wide: 35,441 out of 53,027
  • Since beginning of last month:
    • Site-wide: 50,290 out of 53,027

Genetic variation and gene expression across multiple tissues and developmental stages in a non-human primate

genetics more details view paper
  • Downloaded 853 times
  • Download rankings, all-time:
    • Site-wide: 7,399 out of 53,027
    • In genetics: 586 out of 3,086
  • Year to date:
    • Site-wide: 36,127 out of 53,027
  • Since beginning of last month:
    • Site-wide: 43,716 out of 53,027

A Bayesian Framework for Estimating Cell Type Composition from DNA Methylation Without the Need for Methylation Reference

bioinformatics more details view paper
  • Downloaded 848 times
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    • Site-wide: 7,469 out of 53,027
    • In bioinformatics: 1,351 out of 5,533
  • Year to date:
    • Site-wide: 34,910 out of 53,027
  • Since beginning of last month:
    • Site-wide: 39,196 out of 53,027

Selection on the FADS region in Europeans

genetics more details view paper
  • Downloaded 793 times
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    • Site-wide: 8,301 out of 53,027
    • In genetics: 643 out of 3,086
  • Year to date:
    • Site-wide: 37,201 out of 53,027
  • Since beginning of last month:
    • Site-wide: 37,722 out of 53,027

HapIso : An Accurate Method for the Haplotype-Specific Isoforms Reconstruction from Long Single-Molecule Reads

bioinformatics more details view paper
  • Downloaded 766 times
  • Download rankings, all-time:
    • Site-wide: 8,739 out of 53,027
    • In bioinformatics: 1,558 out of 5,533
  • Year to date:
    • Site-wide: 44,415 out of 53,027
  • Since beginning of last month:
    • Site-wide: 36,975 out of 53,027

Addressing the digital divide in contemporary biology: Lessons from teaching UNIX

scientific communication and education more details view paper
  • Downloaded 721 times
  • Download rankings, all-time:
    • Site-wide: 9,520 out of 53,027
    • In scientific communication and education: 97 out of 351
  • Year to date:
    • Site-wide: 43,986 out of 53,027
  • Since beginning of last month:
    • Site-wide: 44,731 out of 53,027

Long single-molecule reads can resolve the complexity of the Influenza virus composed of rare, closely related mutant variants

bioinformatics more details view paper
  • Downloaded 710 times
  • Download rankings, all-time:
    • Site-wide: 9,746 out of 53,027
    • In bioinformatics: 1,703 out of 5,533
  • Year to date:
    • Site-wide: 44,771 out of 53,027
  • Since beginning of last month:
    • Site-wide: 44,642 out of 53,027

Leveraging allele-specific expression to refine fine-mapping for eQTL studies

genetics more details view paper
  • Downloaded 672 times
  • Download rankings, all-time:
    • Site-wide: 10,488 out of 53,027
    • In genetics: 769 out of 3,086
  • Year to date:
    • Site-wide: 10,018 out of 53,027
  • Since beginning of last month:
    • Site-wide: 7,244 out of 53,027

Applying meta-analysis to Genotype-Tissue Expression data from multiple tissues to identify eQTLs and increase the number of eGenes

bioinformatics more details view paper
  • Downloaded 493 times
  • Download rankings, all-time:
    • Site-wide: 15,805 out of 53,027
    • In bioinformatics: 2,477 out of 5,533
  • Year to date:
    • Site-wide: 40,726 out of 53,027
  • Since beginning of last month:
    • Site-wide: 48,606 out of 53,027

Fast and accurate construction of confidence intervals for heritability

genetics more details view paper
  • Downloaded 482 times
  • Download rankings, all-time:
    • Site-wide: 16,246 out of 53,027
    • In genetics: 1,140 out of 3,086
  • Year to date:
    • Site-wide: 43,680 out of 53,027
  • Since beginning of last month:
    • Site-wide: 45,836 out of 53,027

The Multivariate Normal Distribution Framework for Analyzing Association Studies

genetics more details view paper
  • Downloaded 462 times
  • Download rankings, all-time:
    • Site-wide: 17,041 out of 53,027
    • In genetics: 1,188 out of 3,086
  • Year to date:
    • Site-wide: 29,203 out of 53,027
  • Since beginning of last month:
    • Site-wide: 22,303 out of 53,027

A unifying framework for summary statistic imputation

bioinformatics more details view paper
  • Downloaded 308 times
  • Download rankings, all-time:
    • Site-wide: 25,782 out of 53,027
    • In bioinformatics: 3,525 out of 5,533
  • Year to date:
    • Site-wide: 32,682 out of 53,027
  • Since beginning of last month:
    • Site-wide: 21,493 out of 53,027

Analysis of multiple fungal sequence repositories highlights shortcomings in microbial databases

bioinformatics more details view paper
  • Downloaded 303 times
  • Download rankings, all-time:
    • Site-wide: 26,119 out of 53,027
    • In bioinformatics: 3,559 out of 5,533
  • Year to date:
    • Site-wide: 7,828 out of 53,027
  • Since beginning of last month:
    • Site-wide: 22,192 out of 53,027

Characterization of expression quantitative trait loci in extensively phenotyped pedigrees ascertained for bipolar disorder

genomics more details view paper
  • Downloaded 288 times
  • Download rankings, all-time:
    • Site-wide: 27,307 out of 53,027
    • In genomics: 2,737 out of 3,782
  • Year to date:
    • Site-wide: 47,631 out of 53,027
  • Since beginning of last month:
    • Site-wide: 48,259 out of 53,027

Leveraging allelic heterogeneity to increase power of association testing

genetics more details view paper
  • Downloaded 198 times
  • Download rankings, all-time:
    • Site-wide: 35,784 out of 53,027
    • In genetics: 2,237 out of 3,086
  • Year to date:
    • Site-wide: 22,871 out of 53,027
  • Since beginning of last month:
    • Site-wide: 18,739 out of 53,027

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