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Author: Eleazar Eskin

Rankings

  • All-time downloads: 59,260 (rank: 562 out of 363,048)
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    • bioinformatics: 23,187 (rank: 98 out of 31,390)
    • genetics: 13,828 (rank: 774 out of 34,012)
    • genomics: 13,844 (rank: 792 out of 39,209)
    • immunology: 3,906 (rank: 486 (tie) out of 18,874)
    • microbiology: 3,675 (rank: 1,579 (tie) out of 40,028)
    • scientific communication and education: 820 (rank: 876 (tie) out of 3,026)

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Preprints

Leveraging pleiotropy in genome-wide association studies in multiple traits with per trait interpretations

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Challenges and recommendations to improve installability and archival stability of omics computational tools

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Local genetic effects on gene expression across 44 human tissues

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Computational Pan-Genomics: Status, Promises and Challenges

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Profiling immunoglobulin repertoires across multiple human tissues by RNA Sequencing

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Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia

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Distant regulatory effects of genetic variation in multiple human tissues

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Comprehensive analysis of RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues

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Word and sentence embedding tools to measure semantic similarity of Gene Ontology terms by their definitions

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UMI-Reducer: Collapsing duplicate sequencing reads via Unique Molecular Identifiers

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Review: Population Structure in Genetic Studies: Confounding Factors and Mixed Models

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Widespread allelic heterogeneity in complex traits

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Leveraging molecular QTL to understand the genetic architecture of diseases and complex traits

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Colocalization of GWAS and eQTL Signals Detects Target Genes

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MiCoP: Microbial Community Profiling method for detecting viral and fungal organisms in metagenomic samples

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Cell-type-specific resolution epigenetics without the need for cell sorting or single-cell biology

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Benchmarking of computational error-correction methods for next-generation sequencing data

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Improved methods for multi-trait fine mapping of pleiotropic risk loci

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Spatial localization of recent ancestors for admixed individuals

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Genetic variation and gene expression across multiple tissues and developmental stages in a non-human primate

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An Ancestry Based Approach for Detecting Interactions

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The genetic basis of host choice and resting behavior in the major African malaria vector, Anopheles arabiensis

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A Bayesian Framework for Estimating Cell Type Composition from DNA Methylation Without the Need for Methylation Reference

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Leveraging allele-specific expression to refine fine-mapping for eQTL studies

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Selection on the FADS region in Europeans

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HapIso : An Accurate Method for the Haplotype-Specific Isoforms Reconstruction from Long Single-Molecule Reads

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Addressing the digital divide in contemporary biology: Lessons from teaching UNIX

scientific communication and education more details view paper
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Long single-molecule reads can resolve the complexity of the Influenza virus composed of rare, closely related mutant variants

bioinformatics more details view paper
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A comprehensive benchmarking of WGS-based structural variant callers

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Improving the usability and comprehensiveness of microbial databases

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The Multivariate Normal Distribution Framework for Analyzing Association Studies

genetics more details view paper
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Applying meta-analysis to Genotype-Tissue Expression data from multiple tissues to identify eQTLs and increase the number of eGenes

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Fast and accurate construction of confidence intervals for heritability

genetics more details view paper
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Metalign: Efficient alignment-based metagenomic profiling via containment min hash

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Evaluating Representations for Gene Ontology Terms

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Identifying Causal Variants by Fine Mapping Across Multiple Studies

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A unifying framework for summary statistic imputation

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Leveraging allelic heterogeneity to increase power of association testing

genetics more details view paper
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Large-scale Genetic Analysis Identifies 66 Novel Loci for Asthma

genetics more details view paper
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Annotating Gene Ontology terms for protein sequences with the Transformer model

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Accurate modeling of replication rates in genome-wide association studies by accounting for winner's curse and study-specific heterogeneity

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