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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 60,161 bioRxiv papers from 267,433 authors.

Author: Eleazar Eskin

Rankings

  • All-time downloads: 50,207 (rank: 267 out of 267,433)
  • Categories:
    • bioinformatics: 17,325 (rank: 92 out of 23,830)
    • genetics: 12,271 (rank: 703 out of 27,046)
    • genomics: 13,184 (rank: 599 out of 31,222)
    • immunology: 3,305 (rank: 186 (tie) out of 11,857)
    • microbiology: 3,375 (rank: 340 (tie) out of 27,323)
    • scientific communication and education: 747 (rank: 626 (tie) out of 2,210)

Downloads per author, site-wide

Preprints

Learning Representations for Gene Ontology Terms by Contextualized Text Encoders

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Challenges and recommendations to improve the installability and archival stability of omics computational tools

bioinformatics more details view paper
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  • Download rankings, all-time:
    • Site-wide: 489 out of 60,161
    • In bioinformatics: 101 out of 6,077
  • Year to date:
    • Site-wide: 489 out of 60,161
  • Since beginning of last month:
    • Site-wide: 1,082 out of 60,161

Local genetic effects on gene expression across 44 human tissues

genomics more details view paper
  • Downloaded 4,134 times
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    • In genomics: 150 out of 4,168
  • Year to date:
    • Site-wide: 31,961 out of 60,161
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    • Site-wide: 27,620 out of 60,161

Computational Pan-Genomics: Status, Promises and Challenges

genomics more details view paper
  • Downloaded 4,044 times
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    • Site-wide: 592 out of 60,161
    • In genomics: 158 out of 4,168
  • Year to date:
    • Site-wide: 9,232 out of 60,161
  • Since beginning of last month:
    • Site-wide: 8,780 out of 60,161

Transcriptome analysis in whole blood reveals increased microbial diversity in schizophrenia

microbiology more details view paper
  • Downloaded 3,375 times
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    • In microbiology: 16 out of 4,799
  • Year to date:
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    • Site-wide: 16,219 out of 60,161

Profiling immunoglobulin repertoires across multiple human tissues by RNA Sequencing

immunology more details view paper
  • Downloaded 3,305 times
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    • In immunology: 11 out of 1,466
  • Year to date:
    • Site-wide: 1,726 out of 60,161
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    • Site-wide: 4,128 out of 60,161

Comprehensive analysis of RNA-sequencing to find the source of 1 trillion reads across diverse adult human tissues

genomics more details view paper
  • Downloaded 2,515 times
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    • In genomics: 331 out of 4,168
  • Year to date:
    • Site-wide: 34,884 out of 60,161
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    • Site-wide: 30,620 out of 60,161

Distant regulatory effects of genetic variation in multiple human tissues

genomics more details view paper
  • Downloaded 2,491 times
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    • In genomics: 334 out of 4,168
  • Year to date:
    • Site-wide: 15,711 out of 60,161
  • Since beginning of last month:
    • Site-wide: 16,715 out of 60,161

Word and sentence embedding tools to measure semantic similarity of Gene Ontology terms by their definitions

bioinformatics more details view paper
  • Downloaded 2,181 times
  • Download rankings, all-time:
    • Site-wide: 1,828 out of 60,161
    • In bioinformatics: 376 out of 6,077
  • Year to date:
    • Site-wide: 3,493 out of 60,161
  • Since beginning of last month:
    • Site-wide: 5,712 out of 60,161

UMI-Reducer: Collapsing duplicate sequencing reads via Unique Molecular Identifiers

bioinformatics more details view paper
  • Downloaded 2,071 times
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    • Site-wide: 1,999 out of 60,161
    • In bioinformatics: 415 out of 6,077
  • Year to date:
    • Site-wide: 4,894 out of 60,161
  • Since beginning of last month:
    • Site-wide: 15,570 out of 60,161

Review: Population Structure in Genetic Studies: Confounding Factors and Mixed Models

bioinformatics more details view paper
  • Downloaded 2,067 times
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    • In bioinformatics: 420 out of 6,077
  • Year to date:
    • Site-wide: 5,728 out of 60,161
  • Since beginning of last month:
    • Site-wide: 13,860 out of 60,161

Widespread allelic heterogeneity in complex traits

genetics more details view paper
  • Downloaded 1,653 times
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    • Site-wide: 2,977 out of 60,161
    • In genetics: 263 out of 3,431
  • Year to date:
    • Site-wide: 40,940 out of 60,161
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    • Site-wide: 36,044 out of 60,161

Leveraging molecular QTL to understand the genetic architecture of diseases and complex traits

genetics more details view paper
  • Downloaded 1,488 times
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    • Site-wide: 3,543 out of 60,161
    • In genetics: 316 out of 3,431
  • Year to date:
    • Site-wide: 23,541 out of 60,161
  • Since beginning of last month:
    • Site-wide: 34,013 out of 60,161

Colocalization of GWAS and eQTL Signals Detects Target Genes

genetics more details view paper
  • Downloaded 1,393 times
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    • Site-wide: 3,950 out of 60,161
    • In genetics: 345 out of 3,431
  • Year to date:
    • Site-wide: 35,318 out of 60,161
  • Since beginning of last month:
    • Site-wide: 28,683 out of 60,161

MiCoP: Microbial Community Profiling method for detecting viral and fungal organisms in metagenomic samples

bioinformatics more details view paper
  • Downloaded 1,245 times
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    • Site-wide: 4,738 out of 60,161
    • In bioinformatics: 932 out of 6,077
  • Year to date:
    • Site-wide: 9,470 out of 60,161
  • Since beginning of last month:
    • Site-wide: 26,208 out of 60,161

Cell-type-specific resolution epigenetics without the need for cell sorting or single-cell biology

bioinformatics more details view paper
  • Downloaded 1,137 times
  • Download rankings, all-time:
    • Site-wide: 5,513 out of 60,161
    • In bioinformatics: 1,057 out of 6,077
  • Year to date:
    • Site-wide: 3,558 out of 60,161
  • Since beginning of last month:
    • Site-wide: 6,882 out of 60,161

Improved methods for multi-trait fine mapping of pleiotropic risk loci

genetics more details view paper
  • Downloaded 1,006 times
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    • Site-wide: 6,763 out of 60,161
    • In genetics: 541 out of 3,431
  • Year to date:
    • Site-wide: 38,363 out of 60,161
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    • Site-wide: 37,514 out of 60,161

Spatial localization of recent ancestors for admixed individuals

genetics more details view paper
  • Downloaded 990 times
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    • Site-wide: 6,931 out of 60,161
    • In genetics: 550 out of 3,431
  • Year to date:
    • Site-wide: 50,975 out of 60,161
  • Since beginning of last month:
    • Site-wide: 48,120 out of 60,161

An Ancestry Based Approach for Detecting Interactions

genetics more details view paper
  • Downloaded 960 times
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    • Site-wide: 7,249 out of 60,161
    • In genetics: 569 out of 3,431
  • Year to date:
    • Site-wide: 44,668 out of 60,161
  • Since beginning of last month:
    • Site-wide: 52,146 out of 60,161

The genetic basis of host choice and resting behavior in the major African malaria vector, Anopheles arabiensis

genetics more details view paper
  • Downloaded 929 times
  • Download rankings, all-time:
    • Site-wide: 7,633 out of 60,161
    • In genetics: 599 out of 3,431
  • Year to date:
    • Site-wide: 40,733 out of 60,161
  • Since beginning of last month:
    • Site-wide: 54,616 out of 60,161

Genetic variation and gene expression across multiple tissues and developmental stages in a non-human primate

genetics more details view paper
  • Downloaded 893 times
  • Download rankings, all-time:
    • Site-wide: 8,143 out of 60,161
    • In genetics: 621 out of 3,431
  • Year to date:
    • Site-wide: 38,544 out of 60,161
  • Since beginning of last month:
    • Site-wide: 34,564 out of 60,161

A Bayesian Framework for Estimating Cell Type Composition from DNA Methylation Without the Need for Methylation Reference

bioinformatics more details view paper
  • Downloaded 869 times
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    • Site-wide: 8,494 out of 60,161
    • In bioinformatics: 1,500 out of 6,077
  • Year to date:
    • Site-wide: 43,940 out of 60,161
  • Since beginning of last month:
    • Site-wide: 53,644 out of 60,161

Selection on the FADS region in Europeans

genetics more details view paper
  • Downloaded 822 times
  • Download rankings, all-time:
    • Site-wide: 9,266 out of 60,161
    • In genetics: 689 out of 3,431
  • Year to date:
    • Site-wide: 42,835 out of 60,161
  • Since beginning of last month:
    • Site-wide: 41,961 out of 60,161

HapIso : An Accurate Method for the Haplotype-Specific Isoforms Reconstruction from Long Single-Molecule Reads

bioinformatics more details view paper
  • Downloaded 801 times
  • Download rankings, all-time:
    • Site-wide: 9,627 out of 60,161
    • In bioinformatics: 1,672 out of 6,077
  • Year to date:
    • Site-wide: 46,531 out of 60,161
  • Since beginning of last month:
    • Site-wide: 33,252 out of 60,161

Leveraging allele-specific expression to refine fine-mapping for eQTL studies

genetics more details view paper
  • Downloaded 779 times
  • Download rankings, all-time:
    • Site-wide: 10,056 out of 60,161
    • In genetics: 734 out of 3,431
  • Year to date:
    • Site-wide: 9,728 out of 60,161
  • Since beginning of last month:
    • Site-wide: 14,728 out of 60,161

Addressing the digital divide in contemporary biology: Lessons from teaching UNIX

scientific communication and education more details view paper
  • Downloaded 747 times
  • Download rankings, all-time:
    • Site-wide: 10,665 out of 60,161
    • In scientific communication and education: 107 out of 417
  • Year to date:
    • Site-wide: 49,866 out of 60,161
  • Since beginning of last month:
    • Site-wide: 43,378 out of 60,161

Long single-molecule reads can resolve the complexity of the Influenza virus composed of rare, closely related mutant variants

bioinformatics more details view paper
  • Downloaded 739 times
  • Download rankings, all-time:
    • Site-wide: 10,824 out of 60,161
    • In bioinformatics: 1,844 out of 6,077
  • Year to date:
    • Site-wide: 49,172 out of 60,161
  • Since beginning of last month:
    • Site-wide: 48,968 out of 60,161

Benchmarking of computational error-correction methods for next-generation sequencing via unique molecular identifiers

bioinformatics more details view paper
  • Downloaded 527 times
  • Download rankings, all-time:
    • Site-wide: 17,241 out of 60,161
    • In bioinformatics: 2,630 out of 6,077
  • Year to date:
    • Site-wide: 3,909 out of 60,161
  • Since beginning of last month:
    • Site-wide: 12,575 out of 60,161

Applying meta-analysis to Genotype-Tissue Expression data from multiple tissues to identify eQTLs and increase the number of eGenes

bioinformatics more details view paper
  • Downloaded 514 times
  • Download rankings, all-time:
    • Site-wide: 17,769 out of 60,161
    • In bioinformatics: 2,690 out of 6,077
  • Year to date:
    • Site-wide: 49,222 out of 60,161
  • Since beginning of last month:
    • Site-wide: 44,510 out of 60,161

The Multivariate Normal Distribution Framework for Analyzing Association Studies

genetics more details view paper
  • Downloaded 502 times
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    • Site-wide: 18,299 out of 60,161
    • In genetics: 1,239 out of 3,431
  • Year to date:
    • Site-wide: 32,799 out of 60,161
  • Since beginning of last month:
    • Site-wide: 36,873 out of 60,161

Fast and accurate construction of confidence intervals for heritability

genetics more details view paper
  • Downloaded 497 times
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    • Site-wide: 18,519 out of 60,161
    • In genetics: 1,255 out of 3,431
  • Year to date:
    • Site-wide: 53,798 out of 60,161
  • Since beginning of last month:
    • Site-wide: 57,492 out of 60,161

Analysis of multiple fungal sequence repositories highlights shortcomings in microbial databases

bioinformatics more details view paper
  • Downloaded 395 times
  • Download rankings, all-time:
    • Site-wide: 24,063 out of 60,161
    • In bioinformatics: 3,372 out of 6,077
  • Year to date:
    • Site-wide: 8,698 out of 60,161
  • Since beginning of last month:
    • Site-wide: 9,416 out of 60,161

A unifying framework for summary statistic imputation

bioinformatics more details view paper
  • Downloaded 329 times
  • Download rankings, all-time:
    • Site-wide: 28,967 out of 60,161
    • In bioinformatics: 3,818 out of 6,077
  • Year to date:
    • Site-wide: 41,634 out of 60,161
  • Since beginning of last month:
    • Site-wide: 49,365 out of 60,161

Leveraging allelic heterogeneity to increase power of association testing

genetics more details view paper
  • Downloaded 218 times
  • Download rankings, all-time:
    • Site-wide: 40,019 out of 60,161
    • In genetics: 2,448 out of 3,431
  • Year to date:
    • Site-wide: 31,613 out of 60,161
  • Since beginning of last month:
    • Site-wide: 54,222 out of 60,161

Large-scale Genetic Analysis Identifies 66 Novel Loci for Asthma

genetics more details view paper
  • Downloaded 141 times
  • Download rankings, all-time:
    • Site-wide: 49,755 out of 60,161
    • In genetics: 2,951 out of 3,431
  • Year to date:
    • Site-wide: 26,559 out of 60,161
  • Since beginning of last month:
    • Site-wide: 2,131 out of 60,161

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