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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 59,633 bioRxiv papers from 265,294 authors.

Author: Huanming Yang

  • ORCiD: http://orcid.org/0000-0002-0858-3410
  • Most recently observed institution: BGI-Shenzhen, Shenzhen 518083, China; James D. Watson Institute of Genome Sciences, Hangzhou, China; China National GeneBank, BGI-Shenzhen, Shenzhen 518120, China;

Rankings

  • All-time downloads: 33,348 (rank: 481 out of 265,294)
  • Categories:
    • bioinformatics: 1,188 (rank: 6,127 (tie) out of 23,688)
    • cancer biology: 2,903 (rank: 444 (tie) out of 16,032)
    • clinical trials: 559 (rank: 327 (tie) out of 1,031)
    • developmental biology: 1,435 (rank: 672 (tie) out of 9,844)
    • ecology: 420 (rank: 3,941 (tie) out of 10,475)
    • evolutionary biology: 810 (rank: 3,883 (tie) out of 14,651)
    • genetics: 1,063 (rank: 9,110 (tie) out of 26,961)
    • genomics: 18,850 (rank: 340 out of 31,037)
    • immunology: 2,178 (rank: 369 out of 11,709)
    • microbiology: 2,421 (rank: 689 out of 27,150)
    • molecular biology: 1,521 (rank: 915 (tie) out of 11,869)

Downloads per author, site-wide

Preprints

Efficient long single molecule sequencing for cost effective and accurate sequencing, haplotyping, and de novo assembly

genomics more details view paper
  • Downloaded 4,556 times
  • Download rankings, all-time:
    • Site-wide: 449 out of 59,633
    • In genomics: 122 out of 4,155
  • Year to date:
    • Site-wide: 234 out of 59,633
  • Since beginning of last month:
    • Site-wide: 1,683 out of 59,633

Genomic basis for RNA alterations revealed by whole-genome analyses of 27 cancer types

genomics more details view paper
  • Downloaded 3,362 times
  • Download rankings, all-time:
    • Site-wide: 846 out of 59,633
    • In genomics: 221 out of 4,155
  • Year to date:
    • Site-wide: 2,201 out of 59,633
  • Since beginning of last month:
    • Site-wide: 2,605 out of 59,633

Comprehensive analysis of immune evasion in breast cancer by single-cell RNA-seq

cancer biology more details view paper
  • Downloaded 2,451 times
  • Download rankings, all-time:
    • Site-wide: 1,478 out of 59,633
    • In cancer biology: 37 out of 1,948
  • Year to date:
    • Site-wide: 1,042 out of 59,633
  • Since beginning of last month:
    • Site-wide: 6,272 out of 59,633

Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity

genomics more details view paper
  • Downloaded 2,236 times
  • Download rankings, all-time:
    • Site-wide: 1,740 out of 59,633
    • In genomics: 389 out of 4,155
  • Year to date:
    • Site-wide: 4,207 out of 59,633
  • Since beginning of last month:
    • Site-wide: 10,302 out of 59,633

Reliable Multiplex Sequencing with Rare Index Mis-Assignment on DNB-Based NGS Platform

genomics more details view paper
  • Downloaded 1,341 times
  • Download rankings, all-time:
    • Site-wide: 4,153 out of 59,633
    • In genomics: 764 out of 4,155
  • Year to date:
    • Site-wide: 3,677 out of 59,633
  • Since beginning of last month:
    • Site-wide: 10,798 out of 59,633

TET1 Modulates H4K16 Acetylation by Interacting with hMOF to Regulate Expression of DNA Repair Genes and Oncogenic Transformation

molecular biology more details view paper
  • Downloaded 1,341 times
  • Download rankings, all-time:
    • Site-wide: 4,152 out of 59,633
    • In molecular biology: 120 out of 1,838
  • Year to date:
    • Site-wide: 23,074 out of 59,633
  • Since beginning of last month:
    • Site-wide: 35,692 out of 59,633

Single-cell Transcriptomic Landscape of Nucleated Cells in Umbilical Cord Blood

genomics more details view paper
  • Downloaded 1,297 times
  • Download rankings, all-time:
    • Site-wide: 4,401 out of 59,633
    • In genomics: 795 out of 4,155
  • Year to date:
    • Site-wide: 2,780 out of 59,633
  • Since beginning of last month:
    • Site-wide: 3,807 out of 59,633

Circularization of genes and chromosome by CRISPR in human cells

genomics more details view paper
  • Downloaded 1,067 times
  • Download rankings, all-time:
    • Site-wide: 6,083 out of 59,633
    • In genomics: 1,018 out of 4,155
  • Year to date:
    • Site-wide: 20,494 out of 59,633
  • Since beginning of last month:
    • Site-wide: 45,806 out of 59,633

Chromosome level draft genomes of the fall armyworm, Spodoptera frugiperda (Lepidoptera: Noctuidae), an alien invasive pest in China

genomics more details view paper
  • Downloaded 997 times
  • Download rankings, all-time:
    • Site-wide: 6,759 out of 59,633
    • In genomics: 1,114 out of 4,155
  • Year to date:
    • Site-wide: 1,254 out of 59,633
  • Since beginning of last month:
    • Site-wide: 1,357 out of 59,633

Single-cell RNA-seq reveals dynamic transcriptome profiling in human early neural differentiation

developmental biology more details view paper
  • Downloaded 990 times
  • Download rankings, all-time:
    • Site-wide: 6,842 out of 59,633
    • In developmental biology: 137 out of 1,779
  • Year to date:
    • Site-wide: 4,794 out of 59,633
  • Since beginning of last month:
    • Site-wide: 12,452 out of 59,633

A multi-omic cohort as a reference point for promoting a healthy human gut microbiome

microbiology more details view paper
  • Downloaded 941 times
  • Download rankings, all-time:
    • Site-wide: 7,391 out of 59,633
    • In microbiology: 314 out of 4,768
  • Year to date:
    • Site-wide: 1,368 out of 59,633
  • Since beginning of last month:
    • Site-wide: 2,661 out of 59,633

PIRD: Pan immune repertoire database

immunology more details view paper
  • Downloaded 828 times
  • Download rankings, all-time:
    • Site-wide: 9,066 out of 59,633
    • In immunology: 136 out of 1,452
  • Year to date:
    • Site-wide: 4,932 out of 59,633
  • Since beginning of last month:
    • Site-wide: 2,609 out of 59,633

A Complete Public Domain Family Genomics Dataset

genomics more details view paper
  • Downloaded 821 times
  • Download rankings, all-time:
    • Site-wide: 9,179 out of 59,633
    • In genomics: 1,393 out of 4,155
  • Year to date:
    • Site-wide: 35,009 out of 59,633
  • Since beginning of last month:
    • Site-wide: 32,004 out of 59,633

Recent origin of an XX/XY sex-determination system in the ancient plant lineage Ginkgo biloba

evolutionary biology more details view paper
  • Downloaded 810 times
  • Download rankings, all-time:
    • Site-wide: 9,370 out of 59,633
    • In evolutionary biology: 634 out of 4,076
  • Year to date:
    • Site-wide: 1,794 out of 59,633
  • Since beginning of last month:
    • Site-wide: 5,416 out of 59,633

A new massively parallel nanoball sequencing platform for whole exome research

genomics more details view paper
  • Downloaded 799 times
  • Download rankings, all-time:
    • Site-wide: 9,557 out of 59,633
    • In genomics: 1,429 out of 4,155
  • Year to date:
    • Site-wide: 2,571 out of 59,633
  • Since beginning of last month:
    • Site-wide: 3,404 out of 59,633

A catalog of microbial genes from the bovine rumen unveils a specialized and diverse biomass-degrading environment

microbiology more details view paper
  • Downloaded 747 times
  • Download rankings, all-time:
    • Site-wide: 10,543 out of 59,633
    • In microbiology: 477 out of 4,768
  • Year to date:
    • Site-wide: 13,238 out of 59,633
  • Since beginning of last month:
    • Site-wide: 15,630 out of 59,633

A Single-Cell Immune Atlas of Triple Negative Breast Cancer Reveals Novel Immune Cell Subsets

immunology more details view paper
  • Downloaded 635 times
  • Download rankings, all-time:
    • Site-wide: 13,263 out of 59,633
    • In immunology: 216 out of 1,452
  • Year to date:
    • Site-wide: 2,724 out of 59,633
  • Since beginning of last month:
    • Site-wide: 1,154 out of 59,633

The landscape of somatic mutation in sporadic Chinese colorectal cancer

genomics more details view paper
  • Downloaded 572 times
  • Download rankings, all-time:
    • Site-wide: 15,309 out of 59,633
    • In genomics: 1,962 out of 4,155
  • Year to date:
    • Site-wide: 32,979 out of 59,633
  • Since beginning of last month:
    • Site-wide: 29,158 out of 59,633

Integrated Analysis Revealed Hub Genes in Breast Cancer

bioinformatics more details view paper
  • Downloaded 569 times
  • Download rankings, all-time:
    • Site-wide: 15,391 out of 59,633
    • In bioinformatics: 2,437 out of 6,034
  • Year to date:
    • Site-wide: 8,682 out of 59,633
  • Since beginning of last month:
    • Site-wide: 7,558 out of 59,633

Fecal microbiota transplantation brings about bacterial strain displacement in patients with inflammatory bowel diseases

clinical trials more details view paper
  • Downloaded 559 times
  • Download rankings, all-time:
    • Site-wide: 15,771 out of 59,633
    • In clinical trials: 24 out of 99
  • Year to date:
    • Site-wide: 5,508 out of 59,633
  • Since beginning of last month:
    • Site-wide: 3,728 out of 59,633

Age-dependent sexual dimorphism in the adult human gut microbiota

genomics more details view paper
  • Downloaded 541 times
  • Download rankings, all-time:
    • Site-wide: 16,476 out of 59,633
    • In genomics: 2,070 out of 4,155
  • Year to date:
    • Site-wide: 3,616 out of 59,633
  • Since beginning of last month:
    • Site-wide: 23,188 out of 59,633

Draft genome sequence of the Solanum aethiopicum provides insights into disease resistance, drought tolerance and the evolution of the genome

genomics more details view paper
  • Downloaded 476 times
  • Download rankings, all-time:
    • Site-wide: 19,258 out of 59,633
    • In genomics: 2,267 out of 4,155
  • Year to date:
    • Site-wide: 4,434 out of 59,633
  • Since beginning of last month:
    • Site-wide: 7,285 out of 59,633

Gene Panel Sequencing in a Chinese High-risk Breast Cancer Cohort

cancer biology more details view paper
  • Downloaded 452 times
  • Download rankings, all-time:
    • Site-wide: 20,436 out of 59,633
    • In cancer biology: 612 out of 1,948
  • Year to date:
    • Site-wide: 4,827 out of 59,633
  • Since beginning of last month:
    • Site-wide: 4,953 out of 59,633

Single-cell RNA-seq reveals distinct dynamic behavior of sex chromosomes during early human embryogenesis

developmental biology more details view paper
  • Downloaded 445 times
  • Download rankings, all-time:
    • Site-wide: 20,844 out of 59,633
    • In developmental biology: 533 out of 1,779
  • Year to date:
    • Site-wide: 10,125 out of 59,633
  • Since beginning of last month:
    • Site-wide: 19,163 out of 59,633

LFMD: detecting low-frequency mutations in genome sequencing data without molecular tags

bioinformatics more details view paper
  • Downloaded 438 times
  • Download rankings, all-time:
    • Site-wide: 21,243 out of 59,633
    • In bioinformatics: 3,078 out of 6,034
  • Year to date:
    • Site-wide: 5,095 out of 59,633
  • Since beginning of last month:
    • Site-wide: 1,630 out of 59,633

The mitochondrial DNA content can not predict the embryo viability

ecology more details view paper
  • Downloaded 420 times
  • Download rankings, all-time:
    • Site-wide: 22,244 out of 59,633
    • In ecology: 682 out of 2,523
  • Year to date:
    • Site-wide: 6,928 out of 59,633
  • Since beginning of last month:
    • Site-wide: 6,076 out of 59,633

A chromosome-level genome of black rockfish, Sebastes schlegelii, provides insights into the evolution of live birth

genomics more details view paper
  • Downloaded 395 times
  • Download rankings, all-time:
    • Site-wide: 23,752 out of 59,633
    • In genomics: 2,570 out of 4,155
  • Year to date:
    • Site-wide: 6,044 out of 59,633
  • Since beginning of last month:
    • Site-wide: None out of 59,633

Identification of Variable and Joining germline genes and alleles for Rhesus macaque from B-cell receptor repertoires

immunology more details view paper
  • Downloaded 393 times
  • Download rankings, all-time:
    • Site-wide: 23,934 out of 59,633
    • In immunology: 424 out of 1,452
  • Year to date:
    • Site-wide: 30,315 out of 59,633
  • Since beginning of last month:
    • Site-wide: 29,169 out of 59,633

Enhance genome editing efficiency and specificity by a quick CRISPR/Cas9 system

genetics more details view paper
  • Downloaded 336 times
  • Download rankings, all-time:
    • Site-wide: 27,977 out of 59,633
    • In genetics: 1,814 out of 3,406
  • Year to date:
    • Site-wide: 7,897 out of 59,633
  • Since beginning of last month:
    • Site-wide: 359 out of 59,633

Calorie restriction intervention induces enterotype-associated BMI loss in nonobese individuals

microbiology more details view paper
  • Downloaded 267 times
  • Download rankings, all-time:
    • Site-wide: 34,251 out of 59,633
    • In microbiology: 2,204 out of 4,768
  • Year to date:
    • Site-wide: 11,391 out of 59,633
  • Since beginning of last month:
    • Site-wide: 10,892 out of 59,633

Nationwide population genetic screening improves outcomes of newborn screening for hearing loss in China

genetics more details view paper
  • Downloaded 237 times
  • Download rankings, all-time:
    • Site-wide: 37,410 out of 59,633
    • In genetics: 2,333 out of 3,406
  • Year to date:
    • Site-wide: 19,003 out of 59,633
  • Since beginning of last month:
    • Site-wide: 25,052 out of 59,633

Dynamic chromosome rearrangements of the white-spotted bamboo shark shed light on cartilaginous fish diversification mechanisms

genomics more details view paper
  • Downloaded 218 times
  • Download rankings, all-time:
    • Site-wide: 39,595 out of 59,633
    • In genomics: 3,432 out of 4,155
  • Year to date:
    • Site-wide: 15,277 out of 59,633
  • Since beginning of last month:
    • Site-wide: 45,310 out of 59,633

Sequencing of the MHC region defines HLA-DQA1 as the major independent risk for anti-citrullinated protein antibodies (ACPA)-positive rheumatoid arthritis in Han population

genetics more details view paper
  • Downloaded 210 times
  • Download rankings, all-time:
    • Site-wide: 40,583 out of 59,633
    • In genetics: 2,484 out of 3,406
  • Year to date:
    • Site-wide: 28,135 out of 59,633
  • Since beginning of last month:
    • Site-wide: 36,465 out of 59,633

Distinct gut metagenomics and metaproteomics signatures in prediabetics and treatment-naïve type 2 diabetics

microbiology more details view paper
  • Downloaded 189 times
  • Download rankings, all-time:
    • Site-wide: 43,007 out of 59,633
    • In microbiology: 2,968 out of 4,768
  • Year to date:
    • Site-wide: 18,327 out of 59,633
  • Since beginning of last month:
    • Site-wide: 11,617 out of 59,633

PALM-Seq: simultaneous sequencing of cell-free long RNA and small RNA

molecular biology more details view paper
  • Downloaded 180 times
  • Download rankings, all-time:
    • Site-wide: 44,136 out of 59,633
    • In molecular biology: 1,280 out of 1,838
  • Year to date:
    • Site-wide: 19,548 out of 59,633
  • Since beginning of last month:
    • Site-wide: 8,532 out of 59,633

New genetic variants associated with major adverse cardiovascular events in patients with acute coronary syndromes and treated with clopidogrel and aspirin

genetics more details view paper
  • Downloaded 173 times
  • Download rankings, all-time:
    • Site-wide: 45,073 out of 59,633
    • In genetics: 2,730 out of 3,406
  • Year to date:
    • Site-wide: 43,952 out of 59,633
  • Since beginning of last month:
    • Site-wide: 37,756 out of 59,633

High-quality genome assembly and high-density genetic map of asparagus bean

genomics more details view paper
  • Downloaded 172 times
  • Download rankings, all-time:
    • Site-wide: 45,097 out of 59,633
    • In genomics: 3,643 out of 4,155
  • Year to date:
    • Site-wide: 20,580 out of 59,633
  • Since beginning of last month:
    • Site-wide: 44,883 out of 59,633

Shotgun Metagenomics of 361 elderly women reveals gut microbiome change in bone mass loss

microbiology more details view paper
  • Downloaded 164 times
  • Download rankings, all-time:
    • Site-wide: 46,221 out of 59,633
    • In microbiology: 3,301 out of 4,768
  • Year to date:
    • Site-wide: 21,793 out of 59,633
  • Since beginning of last month:
    • Site-wide: 12,065 out of 59,633

Recovered and dead outcome patients caused by influenza A (H7N9) virus infection show different pro-inflammatory cytokine dynamics during disease progress and its application in real-time prognosis

immunology more details view paper
  • Downloaded 162 times
  • Download rankings, all-time:
    • Site-wide: 46,465 out of 59,633
    • In immunology: 1,008 out of 1,452
  • Year to date:
    • Site-wide: 45,309 out of 59,633
  • Since beginning of last month:
    • Site-wide: 47,299 out of 59,633

The landscape and diagnostic potential of T and B cell repertoire in Immunoglobulin A Nephropathy

immunology more details view paper
  • Downloaded 160 times
  • Download rankings, all-time:
    • Site-wide: 46,760 out of 59,633
    • In immunology: 1,019 out of 1,452
  • Year to date:
    • Site-wide: 55,001 out of 59,633
  • Since beginning of last month:
    • Site-wide: 35,228 out of 59,633

WinnerTakeAlmostAll: A parsimony approach integrating multi-targets improves marker gene profiling

bioinformatics more details view paper
  • Downloaded 122 times
  • Download rankings, all-time:
    • Site-wide: 51,707 out of 59,633
    • In bioinformatics: 5,569 out of 6,034
  • Year to date:
    • Site-wide: 29,739 out of 59,633
  • Since beginning of last month:
    • Site-wide: 50,405 out of 59,633

The Urinary Microbiota in Relation to the Reproductive Tract Microbiota

microbiology more details view paper
  • Downloaded 113 times
  • Download rankings, all-time:
    • Site-wide: 52,852 out of 59,633
    • In microbiology: 3,957 out of 4,768
  • Year to date:
    • Site-wide: 32,074 out of 59,633
  • Since beginning of last month:
    • Site-wide: 39,021 out of 59,633

M-GWAS for the gut microbiome in Chinese adults illuminates on complex diseases

genetics more details view paper
  • Downloaded 107 times
  • Download rankings, all-time:
    • Site-wide: 53,501 out of 59,633
    • In genetics: 3,137 out of 3,406
  • Year to date:
    • Site-wide: 33,390 out of 59,633
  • Since beginning of last month:
    • Site-wide: 2,562 out of 59,633

SOAPTyping: an open-source and cross-platform tool for Sanger sequence-based typing for HLA class I and II alleles

bioinformatics more details view paper
  • Downloaded 59 times
  • Download rankings, all-time:
    • Site-wide: 57,629 out of 59,633
    • In bioinformatics: 5,902 out of 6,034
  • Year to date:
    • Site-wide: 49,790 out of 59,633
  • Since beginning of last month:
    • Site-wide: 30,681 out of 59,633

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