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Author: Rohan Maddamsetti

Rankings

  • All-time downloads: 8,282 (rank: 20,743 (tie) )
  • Categories:
    • bioinformatics: 1,080 (rank: 12,406 (tie) )
    • evolutionary biology: 5,626 (rank: 430 )
    • genomics: 1,576 (rank: 13,391 (tie) )

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Preprints

Idiosyncratic purifying selection on metabolic enzymes in the long-term evolution experiment with Escherichia coli

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Selection maintains protein interactome resilience in the long-term evolution experiment with Escherichia coli

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Proteome-scale discovery of protein interactions with residue-level resolution using sequence coevolution

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    • In bioinformatics: 2,053
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Core Genes Evolve Rapidly in the Long-term Evolution Experiment with Escherichia coli

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    • Site-wide: 17,128
    • In evolutionary biology: 728
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Adaptation, Clonal Interference, and Frequency-Dependent Interactions in a Long-Term Evolution Experiment with Escherichia coli

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Genome-wide discovery of epistatic loci affecting antibiotic resistance using evolutionary couplings

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  • Downloaded 865 times
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Sustained fitness gains and variability in fitness trajectories in the long-term evolution experiment with Escherichia coli

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  • Downloaded 729 times
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    • In evolutionary biology: 1,471
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Viral gain-of-function experiments uncover residues under diversifying selection in nature

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  • Downloaded 726 times
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    • In evolutionary biology: 1,483
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Haplotype-phased synthetic long reads from short-read sequencing

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  • Downloaded 711 times
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Analysis of bacterial genomes from an evolution experiment with horizontal gene transfer shows that recombination can sometimes overwhelm selection

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  • Downloaded 709 times
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Genomic and phenotypic evolution of Escherichia coli in a novel citrate-only resource environment

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    • In evolutionary biology: 2,261
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Maintenance of metabolic plasticity despite relaxed selection in a long-term evolution experiment with Escherichia coli

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  • Downloaded 342 times
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    • In evolutionary biology: 3,926
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Divergent evolution of mutation rates and biases in the long-term evolution experiment with Escherichia coli

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  • Downloaded 283 times
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    • In evolutionary biology: 4,482
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A Simple Test to Infer Mode of Selection in Metagenomics Time Series of Evolving Asexual Populations

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  • Downloaded 206 times
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    • In evolutionary biology: 5,207
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Universal constraints on protein evolution in the long-term evolution experiment with Escherichia coli

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    • Site-wide: 116,159
    • In evolutionary biology: 6,061
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