Author: Rohan Maddamsetti

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Preprints

Idiosyncratic purifying selection on metabolic enzymes in the long-term evolution experiment with Escherichia coli

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Selection maintains protein interactome resilience in the long-term evolution experiment with Escherichia coli

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Proteome-scale discovery of protein interactions with residue-level resolution using sequence coevolution

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Core Genes Evolve Rapidly in the Long-term Evolution Experiment with Escherichia coli

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Adaptation, Clonal Interference, and Frequency-Dependent Interactions in a Long-Term Evolution Experiment with Escherichia coli

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Genome-wide discovery of epistatic loci affecting antibiotic resistance using evolutionary couplings

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Sustained fitness gains and variability in fitness trajectories in the long-term evolution experiment with Escherichia coli

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Viral gain-of-function experiments uncover residues under diversifying selection in nature

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Haplotype-phased synthetic long reads from short-read sequencing

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Analysis of bacterial genomes from an evolution experiment with horizontal gene transfer shows that recombination can sometimes overwhelm selection

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Genomic and phenotypic evolution of Escherichia coli in a novel citrate-only resource environment

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Maintenance of metabolic plasticity despite relaxed selection in a long-term evolution experiment with Escherichia coli

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Divergent evolution of mutation rates and biases in the long-term evolution experiment with Escherichia coli

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A Simple Test to Infer Mode of Selection in Metagenomics Time Series of Evolving Asexual Populations

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Universal constraints on protein evolution in the long-term evolution experiment with Escherichia coli

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