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Author: Arend Sidow

Rankings

  • All-time downloads: 23,805 (rank: 8,479 (tie) )
  • Categories:
    • bioinformatics: 3,817 (rank: 3,761 )
    • cancer biology: 2,751 (rank: 2,114 (tie) )
    • genomics: 17,237 (rank: 898 )

Downloads per author, site-wide

Preprints

Extensive sequencing of seven human genomes to characterize benchmark reference materials

genomics more details view paper
  • Downloaded 6,461 times
  • Download rankings, all-time:
    • Site-wide: 1,684
    • In genomics: 136
  • Year to date:
    • Site-wide: 36,009
  • Since beginning of last month:
    • Site-wide: 20,340

De Novo Mutational Signature Discovery in Tumor Genomes using SparseSignatures

bioinformatics more details view paper
  • Downloaded 2,549 times
  • Download rankings, all-time:
    • Site-wide: 6,226
    • In bioinformatics: 654
  • Year to date:
    • Site-wide: 14,621
  • Since beginning of last month:
    • Site-wide: 109,443

Benchmarking challenging small variants with linked and long reads

genomics more details view paper
  • Downloaded 2,217 times
  • Download rankings, all-time:
    • Site-wide: 7,640
    • In genomics: 792
  • Year to date:
    • Site-wide: 2,914
  • Since beginning of last month:
    • Site-wide: 1,714

Multi-omic tumor data reveal diversity of molecular mechanisms that correlate with survival

cancer biology more details view paper
  • Downloaded 2,119 times
  • Download rankings, all-time:
    • Site-wide: 8,148
    • In cancer biology: 132
  • Year to date:
    • Site-wide: 124,907
  • Since beginning of last month:
    • Site-wide: 60,749

Culture-free generation of microbial genomes from human and marine microbiomes

genomics more details view paper
  • Downloaded 2,021 times
  • Download rankings, all-time:
    • Site-wide: 8,750
    • In genomics: 896
  • Year to date:
    • Site-wide: 126,840
  • Since beginning of last month:
    • Site-wide: 115,626

Genome-wide reconstruction of complex structural variants using read clouds

genomics more details view paper
  • Downloaded 1,887 times
  • Download rankings, all-time:
    • Site-wide: 9,678
    • In genomics: 984
  • Year to date:
    • Site-wide: 131,108
  • Since beginning of last month:
    • Site-wide: None

genomeview - an extensible python-based genomics visualization engine

genomics more details view paper
  • Downloaded 1,545 times
  • Download rankings, all-time:
    • Site-wide: 12,916
    • In genomics: 1,331
  • Year to date:
    • Site-wide: 63,281
  • Since beginning of last month:
    • Site-wide: None

De novo diploid genome assembly for genome-wide structural variant detection

genomics more details view paper
  • Downloaded 970 times
  • Download rankings, all-time:
    • Site-wide: 25,977
    • In genomics: 2,397
  • Year to date:
    • Site-wide: 123,050
  • Since beginning of last month:
    • Site-wide: 45,225

Aquila_stLFR: diploid genome assembly basedstructural variant calling package for stLFRlinked-read

bioinformatics more details view paper
  • Downloaded 945 times
  • Download rankings, all-time:
    • Site-wide: 26,903
    • In bioinformatics: 3,043
  • Year to date:
    • Site-wide: 24,087
  • Since beginning of last month:
    • Site-wide: 104,351

svviz: a read viewer for validating structural variants

genomics more details view paper
  • Downloaded 816 times
  • Download rankings, all-time:
    • Site-wide: 33,040
    • In genomics: 2,855
  • Year to date:
    • Site-wide: 117,003
  • Since beginning of last month:
    • Site-wide: 46,821

Aquila: diploid personal genome assembly and comprehensive variant detection based on linked reads

genomics more details view paper
  • Downloaded 705 times
  • Download rankings, all-time:
    • Site-wide: 40,539
    • In genomics: 3,300
  • Year to date:
    • Site-wide: 101,520
  • Since beginning of last month:
    • Site-wide: 57,321

Comprehensive Genomic Characterization of Breast Tumors with BRCA1 and BRCA2 Mutations

cancer biology more details view paper
  • Downloaded 632 times
  • Download rankings, all-time:
    • Site-wide: 46,718
    • In cancer biology: 1,318
  • Year to date:
    • Site-wide: 110,965
  • Since beginning of last month:
    • Site-wide: 30,698

HAPDeNovo: a haplotype-based approach for filtering and phasing de novo mutations in linked read sequencing data

genomics more details view paper
  • Downloaded 615 times
  • Download rankings, all-time:
    • Site-wide: 48,352
    • In genomics: 3,764
  • Year to date:
    • Site-wide: 153,136
  • Since beginning of last month:
    • Site-wide: None

Assessment of human diploid genome assembly with 10x Linked-Reads data

bioinformatics more details view paper
  • Downloaded 323 times
  • Download rankings, all-time:
    • Site-wide: 94,115
    • In bioinformatics: 8,227
  • Year to date:
    • Site-wide: 128,794
  • Since beginning of last month:
    • Site-wide: 103,527

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