Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 67,594 bioRxiv papers from 298,144 authors.

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Preprints

Bioconda: A sustainable and comprehensive software distribution for the life sciences

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  • In bioinformatics: 102 out of 6,655
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  • Site-wide: 13,417 out of 67,594

A Cell Type-Specific Class of Chromatin Loops Anchored at Large DNA Methylation Nadirs

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  • In genomics: 660 out of 4,581
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  • Site-wide: 19,402 out of 67,594

Identification of novel rare sequence variation underlying heritable pulmonary arterial hypertension

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  • In genetics: 423 out of 3,799
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  • Site-wide: 43,264 out of 67,594

Reducing False Positives in CRISPR/Cas9 Screens from Copy Number Variations

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  • In bioinformatics: 1,032 out of 6,655
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  • Site-wide: 3,444 out of 67,594

Exploring functional variation affecting ceRNA regulation in humans

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  • In genetics: 599 out of 3,799
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  • Site-wide: 28,786 out of 67,594

Linking genotypes with multiple phenotypes in single-cell CRISPR screens

• Downloaded 995 times
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  • In bioinformatics: 1,395 out of 6,655
• Year to date:
  • Site-wide: 2,014 out of 67,594
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  • Site-wide: 4,852 out of 67,594

Integrative analysis and refined design of CRISPR knockout screens

• Downloaded 863 times
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  • In bioinformatics: 1,710 out of 6,655
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  • Site-wide: 32,786 out of 67,594
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  • Site-wide: 30,308 out of 67,594

A new method for rapid genome classification, clustering, visualization, and novel taxa discovery from metagenome

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  • Site-wide: 10,517 out of 67,594
  • In bioinformatics: 1,783 out of 6,655
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  • Site-wide: 2,760 out of 67,594
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  • Site-wide: 304 out of 67,594

Poly(A)-ClickSeq: click-chemistry for next-generation 3′-end sequencing without RNA enrichment or fragmentation

• Downloaded 724 times
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  • In molecular biology: 376 out of 2,163
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  • Site-wide: 42,990 out of 67,594
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  • Site-wide: 49,062 out of 67,594

Metagenomic Next-generation Sequencing of Cerebrospinal Fluid for the Diagnosis of Central Nervous System Infections: A Multicentre Prospective Study

• Downloaded 703 times
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  • In genomics: 1,816 out of 4,581
• Year to date:
  • Site-wide: 3,714 out of 67,594
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  • Site-wide: 5,309 out of 67,594

Single cell RNA-seq reveals cellular diversity and developmental characteristics of human infant retina

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  • Site-wide: 14,033 out of 67,594
  • In cell biology: 565 out of 3,290
• Year to date:
  • Site-wide: 3,893 out of 67,594
• Since beginning of last month:
  • Site-wide: 13,657 out of 67,594

Dual functions of Intraflagellar Transport Protein IFT20 in spermiogenesis: formation of sperm flagella and removal of cytoplasm by autophagy

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  • In developmental biology: 348 out of 2,011
• Year to date:
  • Site-wide: 45,285 out of 67,594
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  • Site-wide: 62,794 out of 67,594

Genetic Basis of Alternative Polyadenylation is an Emerging Molecular Phenotype for Human Traits and Diseases

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  • In bioinformatics: 2,452 out of 6,655
• Year to date:
  • Site-wide: 4,494 out of 67,594
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  • Site-wide: 10,692 out of 67,594

CRISPR/Cas9 screens Reveal Dasatinib Targets of Inhibiting T cell Activation and Proliferation

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  • In cancer biology: 536 out of 2,278
• Year to date:
  • Site-wide: 11,448 out of 67,594
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  • Site-wide: 12,302 out of 67,594

Progressive lengthening of 3′ untranslated regions of mRNAs by alternative cleavage and polyadenylation in cellular senescence of mouse embryonic fibroblasts

• Downloaded 513 times
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  • In genomics: 2,380 out of 4,581
• Year to date:
  • Site-wide: 54,461 out of 67,594
• Since beginning of last month:
  • Site-wide: 52,766 out of 67,594

Protein Condensates with Appropriate Material Properties Regulate Tumorigenesis

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  • Site-wide: 21,234 out of 67,594
  • In biochemistry: 488 out of 1,989
• Year to date:
  • Site-wide: 6,574 out of 67,594
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  • Site-wide: 16,032 out of 67,594

Radial contractility of Actomyosin-II rings facilitates cargo trafficking and maintains axonal structural stability following cargo-induced transient axonal expansion

• Downloaded 477 times
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  • Site-wide: 22,589 out of 67,594
  • In neuroscience: 3,842 out of 12,116
• Year to date:
  • Site-wide: 11,392 out of 67,594
• Since beginning of last month:
  • Site-wide: 11,294 out of 67,594

GCNA preserves genome integrity and fertility across species

• Downloaded 463 times
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  • Site-wide: 23,471 out of 67,594
  • In developmental biology: 619 out of 2,011
• Year to date:
  • Site-wide: 7,527 out of 67,594
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  • Site-wide: 6,082 out of 67,594

Extensive alternative splicing transitions during postnatal skeletal muscle development are required for Ca2+ handling

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  • Site-wide: 24,134 out of 67,594
  • In cell biology: 1,114 out of 3,290
• Year to date:
  • Site-wide: 51,821 out of 67,594
• Since beginning of last month:
  • Site-wide: 32,210 out of 67,594

Single cell RNA sequencing reveals cellular diversity of trisomy 21 retina

• Downloaded 438 times
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  • Site-wide: 25,046 out of 67,594
  • In cell biology: 1,157 out of 3,290
• Year to date:
  • Site-wide: 8,257 out of 67,594
• Since beginning of last month:
  • Site-wide: 9,707 out of 67,594

Diagnostic Whole Exome Sequencing in Patients with Short Stature

• Downloaded 354 times
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  • Site-wide: 31,436 out of 67,594
  • In genetics: 1,978 out of 3,799
• Year to date:
  • Site-wide: 28,144 out of 67,594
• Since beginning of last month:
  • Site-wide: 29,624 out of 67,594

Differences in GluN2B-containing NMDA receptors result in opposite long-term plasticity and dopaminergic modulation at ipsilateral vs. contralateral cortico-striatal synapses

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  • Site-wide: 32,274 out of 67,594
  • In neuroscience: 5,563 out of 12,116
• Year to date:
  • Site-wide: 12,277 out of 67,594
• Since beginning of last month:
  • Site-wide: 16,035 out of 67,594

Global lengthening of 3′ untranslated regions of mRNAs by alternative cleavage and polyadenylation in cellular senescence

• Downloaded 343 times
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  • Site-wide: 32,393 out of 67,594
  • In genomics: 3,127 out of 4,581
• Year to date:
  • Site-wide: 64,884 out of 67,594
• Since beginning of last month:
  • Site-wide: 51,297 out of 67,594

Cyclin B3 is specifically required for metaphase to anaphase transition in mouse oocyte meiosis I

• Downloaded 303 times
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  • Site-wide: 36,307 out of 67,594
  • In cell biology: 1,754 out of 3,290
• Year to date:
  • Site-wide: 33,484 out of 67,594
• Since beginning of last month:
  • Site-wide: 57,733 out of 67,594

Long Non-Coding RNA LncKdm2b Regulates Cortical Neuronal Differentiation by Cis-Activating Kdm2b

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  • Site-wide: 36,339 out of 67,594
  • In molecular biology: 1,077 out of 2,163
• Year to date:
  • Site-wide: 21,923 out of 67,594
• Since beginning of last month:
  • Site-wide: 19,400 out of 67,594

SLFL Genes Participate in the Ubiquitination and Degradation of S-RNase in Self-Compatible Chinese Peach

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  • Site-wide: 40,102 out of 67,594
  • In molecular biology: 1,210 out of 2,163
• Year to date:
  • Site-wide: 60,429 out of 67,594
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  • Site-wide: 29,871 out of 67,594

Deciphering tea tree chloroplast and mitochondrial genomes of Camellia sinensis var. assamica

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  • In genomics: 3,625 out of 4,581
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  • Site-wide: 19,031 out of 67,594
• Since beginning of last month:
  • Site-wide: 44,360 out of 67,594

Structural variability and functional association in the epiphytic bacteria assemblies of freshwater macrophytes (Myriophyllum spicatum)

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  • Site-wide: 45,933 out of 67,594
  • In microbiology: 3,147 out of 5,468
• Year to date:
  • Site-wide: 51,695 out of 67,594
• Since beginning of last month:
  • Site-wide: 57,782 out of 67,594

Rapid Detection of Burkholderia pseudomallei with a Lateral Flow Recombinase Polymerase Amplification Assay

• Downloaded 208 times
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  • Site-wide: 47,668 out of 67,594
  • In microbiology: 3,324 out of 5,468
• Year to date:
  • Site-wide: 24,702 out of 67,594
• Since beginning of last month:
  • Site-wide: 32,427 out of 67,594

Pre-implantation genetic diagnosis for a family with Usher syndrome through targeted sequencing and haplotype analysis

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  • Site-wide: 47,894 out of 67,594
  • In genetics: 2,854 out of 3,799
• Year to date:
  • Site-wide: 36,164 out of 67,594
• Since beginning of last month:
  • Site-wide: 47,086 out of 67,594

Noninvasive prenatal test of methylmalonic academia cblC type through targeted sequencing of cell-free DNA in maternal plasma

• Downloaded 201 times
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  • Site-wide: 48,680 out of 67,594
  • In genetics: 2,901 out of 3,799
• Year to date:
  • Site-wide: 41,796 out of 67,594
• Since beginning of last month:
  • Site-wide: 39,090 out of 67,594

The histone modification reader ZCWPW1 links histone methylation to repair of PRDM9-induced meiotic double stand breaks

• Downloaded 196 times
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  • Site-wide: 49,390 out of 67,594
  • In developmental biology: 1,527 out of 2,011
• Year to date:
  • Site-wide: 26,680 out of 67,594
• Since beginning of last month:
  • Site-wide: 1,159 out of 67,594

HiAlc Klebsiella pneumonia, one of potential chief culprits of non-alcoholic fatty liver disease: through generation of endogenous ethanol

• Downloaded 188 times
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  • Site-wide: 50,512 out of 67,594
  • In microbiology: 3,609 out of 5,468
• Year to date:
  • Site-wide: 33,327 out of 67,594
• Since beginning of last month:
  • Site-wide: 16,764 out of 67,594

Numerical Investigation of Drug Transport from Blood Vessels to Tumor Tissue Using a Tumor-Vasculature-on-a-Chip

• Downloaded 173 times
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  • Site-wide: 52,650 out of 67,594
  • In bioengineering: 973 out of 1,364
• Year to date:
  • Site-wide: 30,718 out of 67,594
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  • Site-wide: 29,717 out of 67,594

Coordinate Enhancer Reprogramming by GATA3 and AP1 Promotes Phenotypic Plasticity to Achieve Breast Cancer Endocrine Resistance

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  • Site-wide: 52,853 out of 67,594
  • In cancer biology: 1,679 out of 2,278
• Year to date:
  • Site-wide: 30,934 out of 67,594
• Since beginning of last month:
  • Site-wide: 8,459 out of 67,594

Intra-protein binding peptide fragments have specific and intrinsic sequence patterns

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  • Site-wide: 53,873 out of 67,594
  • In bioinformatics: 5,782 out of 6,655
• Year to date:
  • Site-wide: 65,437 out of 67,594
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  • Site-wide: 61,473 out of 67,594

ATM and ATR Influence Meiotic Crossover Formation Through Antagonistic and Overlapping Functions in C. elegans

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  • In genetics: 3,206 out of 3,799
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  • Site-wide: 33,628 out of 67,594
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  • Site-wide: 52,405 out of 67,594

Clinical diagnosis of single-gene disorders and chromosomal abnormalities based on BGISEQ-500 platform

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  • Site-wide: 55,139 out of 67,594
  • In genomics: 4,162 out of 4,581
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  • Site-wide: 34,135 out of 67,594
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  • Site-wide: 56,406 out of 67,594

Long-Term Potentiation Induces Extrasynaptic Exocytosis of Glun2A-containing NMDA Receptors that is Mainly Controlled by SNAP23

• Downloaded 139 times
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  • In cell biology: 2,841 out of 3,290
• Year to date:
  • Site-wide: 38,236 out of 67,594
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  • Site-wide: 43,039 out of 67,594

Targeting against HIV/HCV Co-infection using Machine Learning-based multitarget-quantitative structure-activity relationships (mt-QSAR) Methods

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  • Site-wide: 58,047 out of 67,594
  • In bioinformatics: 6,072 out of 6,655
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  • Site-wide: 39,362 out of 67,594
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  • Site-wide: 38,895 out of 67,594

Temporal regulation of prenatal embryonic development by paternal imprinted loci

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  • Site-wide: 58,672 out of 67,594
  • In developmental biology: 1,809 out of 2,011
• Year to date:
  • Site-wide: 40,529 out of 67,594
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  • Site-wide: 55,537 out of 67,594

Essential role of Bone morphogenetic protein 15 in porcine ovarian and follicular development and ovulation

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  • Site-wide: 59,242 out of 67,594
  • In developmental biology: 1,830 out of 2,011
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  • Site-wide: 41,797 out of 67,594
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  • Site-wide: 16,955 out of 67,594

Identification of TTN as a novel candidate gene for atrioventricular block in a Chinese pedigree by whole-exome sequencing

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  • Site-wide: 60,029 out of 67,594
  • In genetics: 3,457 out of 3,799
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  • Site-wide: 51,090 out of 67,594
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  • Site-wide: 58,699 out of 67,594

The key miRNAs for metastasis and survival of colon adenocarcinoma

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  • Site-wide: 64,968 out of 67,594
  • In bioinformatics: 6,483 out of 6,655
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  • Site-wide: 59,236 out of 67,594
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  • Site-wide: 56,880 out of 67,594

Impact of ultrasonography on identifying noninvasive prenatal screening false-negative aneuploidy

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  • Site-wide: 65,020 out of 67,594
  • In genetics: 3,688 out of 3,799
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  • Site-wide: 46,983 out of 67,594

Effect of arbuscular mycorrhizal fungi (AMF) and plant growth promoting rhizobacteria (PGPR) on microbial community structure of phenanthrene and pyrene contaminated soils using Illumina HiSeq sequencing.

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  • In ecology: 2,754 out of 2,884
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  • Site-wide: 62,487 out of 67,594
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  • Site-wide: 6,576 out of 67,594

Hsa_circ_0001947 suppresses acute myeloid leukemia progression by sponging hsa-miR-329-5p and regulating CREBRF expression

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  • Site-wide: 66,038 out of 67,594
  • In cancer biology: 2,219 out of 2,278
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  • Site-wide: 64,799 out of 67,594
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  • Site-wide: 40,398 out of 67,594