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Author: Alexei J Drummond

Rankings

  • All-time downloads: 19,631 (rank: 10,488 (tie) )
  • Categories:
    • bioinformatics: 5,441 (rank: 2,391 )
    • epidemiology: 2,868 (rank: 4,623 (tie) )
    • evolutionary biology: 5,643 (rank: 540 )
    • genetics: 187 (rank: 40,164 (tie) )
    • infectious diseases: 4,517 (rank: 9,741 (tie) )
    • molecular biology: 350 (rank: 18,887 (tie) )
    • systems biology: 625 (rank: 7,437 (tie) )

Downloads per author, site-wide

Preprints

Genomic epidemiology reveals transmission patterns and dynamics of SARS-CoV-2 in Aotearoa New Zealand

infectious diseases more details view paper
  • Downloaded 3,976 times
  • Download rankings, all-time:
    • Site-wide: 3,274
    • In infectious diseases: 693
  • Year to date:
    • Site-wide: 13,661
  • Since beginning of last month:
    • Site-wide: 51,425

bModelTest: Bayesian phylogenetic site model averaging and model comparison

bioinformatics more details view paper
  • Downloaded 3,065 times
  • Download rankings, all-time:
    • Site-wide: 4,709
    • In bioinformatics: 457
  • Year to date:
    • Site-wide: 16,729
  • Since beginning of last month:
    • Site-wide: 68,250

StarBEAST2 brings faster species tree inference and accurate estimates of substitution rates

bioinformatics more details view paper
  • Downloaded 1,519 times
  • Download rankings, all-time:
    • Site-wide: 13,113
    • In bioinformatics: 1,511
  • Year to date:
    • Site-wide: 93,791
  • Since beginning of last month:
    • Site-wide: 102,138

Estimating epidemic incidence and prevalence from genomic data

epidemiology more details view paper
  • Downloaded 1,403 times
  • Download rankings, all-time:
    • Site-wide: 14,853
    • In epidemiology: 1,009
  • Year to date:
    • Site-wide: 70,731
  • Since beginning of last month:
    • Site-wide: 69,632

BEAST 2.5: An Advanced Software Platform for Bayesian Evolutionary Analysis

evolutionary biology more details view paper
  • Downloaded 1,393 times
  • Download rankings, all-time:
    • Site-wide: 15,008
    • In evolutionary biology: 512
  • Year to date:
    • Site-wide: 44,641
  • Since beginning of last month:
    • Site-wide: 6,939

Novel Integrative Modeling of Molecules and Morphology across Evolutionary Timescales

evolutionary biology more details view paper
  • Downloaded 1,381 times
  • Download rankings, all-time:
    • Site-wide: 15,208
    • In evolutionary biology: 522
  • Year to date:
    • Site-wide: 20,744
  • Since beginning of last month:
    • Site-wide: 57,738

Joint inference of species histories and gene flow

evolutionary biology more details view paper
  • Downloaded 1,182 times
  • Download rankings, all-time:
    • Site-wide: 19,199
    • In evolutionary biology: 689
  • Year to date:
    • Site-wide: 17,176
  • Since beginning of last month:
    • Site-wide: None

Bayesian Inference of Species Networks from Multilocus Sequence Data

evolutionary biology more details view paper
  • Downloaded 912 times
  • Download rankings, all-time:
    • Site-wide: 27,993
    • In evolutionary biology: 1,202
  • Year to date:
    • Site-wide: 122,790
  • Since beginning of last month:
    • Site-wide: None

Phylodynamics reveals the role of human travel and contact tracing in controlling COVID-19 in four island nations

epidemiology more details view paper
  • Downloaded 868 times
  • Download rankings, all-time:
    • Site-wide: 30,049
    • In epidemiology: 1,607
  • Year to date:
    • Site-wide: 13,056
  • Since beginning of last month:
    • Site-wide: 45,950

Bayesian inference of ancestral recombination graphs for bacterial populations

evolutionary biology more details view paper
  • Downloaded 600 times
  • Download rankings, all-time:
    • Site-wide: 49,270
    • In evolutionary biology: 2,460
  • Year to date:
    • Site-wide: 123,994
  • Since beginning of last month:
    • Site-wide: None

Bayesian phylodynamics of avian influenza virus H9N2 in Asia with time-dependent predictors of migration

epidemiology more details view paper
  • Downloaded 597 times
  • Download rankings, all-time:
    • Site-wide: 49,574
    • In epidemiology: 2,322
  • Year to date:
    • Site-wide: 46,151
  • Since beginning of last month:
    • Site-wide: 99,451

The power and limitations of genomics to track COVID-19 outbreaks: a case study from New Zealand

infectious diseases more details view paper
  • Downloaded 541 times
  • Download rankings, all-time:
    • Site-wide: 56,021
    • In infectious diseases: 3,212
  • Year to date:
    • Site-wide: 29,904
  • Since beginning of last month:
    • Site-wide: 92,771

Phylodynamic model adequacy using posterior predictive simulations

bioinformatics more details view paper
  • Downloaded 481 times
  • Download rankings, all-time:
    • Site-wide: 64,102
    • In bioinformatics: 6,245
  • Year to date:
    • Site-wide: 129,449
  • Since beginning of last month:
    • Site-wide: 67,962

SANTA-SIM: Simulating Viral Sequence Evolution Dynamics Under Selection and Recombination

bioinformatics more details view paper
  • Downloaded 376 times
  • Download rankings, all-time:
    • Site-wide: 81,976
    • In bioinformatics: 7,441
  • Year to date:
    • Site-wide: 124,989
  • Since beginning of last month:
    • Site-wide: 111,036

Scalable total-evidence inference from molecular and continuous characters in a Bayesian framework

systems biology more details view paper
  • Downloaded 372 times
  • Download rankings, all-time:
    • Site-wide: 82,785
    • In systems biology: 1,900
  • Year to date:
    • Site-wide: 13,356
  • Since beginning of last month:
    • Site-wide: 3,029

Bayesian inference and comparison of stochastic transcription elongation models

molecular biology more details view paper
  • Downloaded 350 times
  • Download rankings, all-time:
    • Site-wide: 87,095
    • In molecular biology: 2,532
  • Year to date:
    • Site-wide: 139,627
  • Since beginning of last month:
    • Site-wide: 121,280

Approximate Bayesian computation of transcriptional pausing mechanisms

systems biology more details view paper
  • Downloaded 253 times
  • Download rankings, all-time:
    • Site-wide: 109,495
    • In systems biology: 2,449
  • Year to date:
    • Site-wide: 123,233
  • Since beginning of last month:
    • Site-wide: 103,465

Evolutionary history of cotranscriptional editing in the paramyxoviral phosphoprotein gene

genetics more details view paper
  • Downloaded 187 times
  • Download rankings, all-time:
    • Site-wide: 125,734
    • In genetics: 5,181
  • Year to date:
    • Site-wide: 70,374
  • Since beginning of last month:
    • Site-wide: None

Ignoring errors causes inaccurate timing of single-cell phylogenies

evolutionary biology more details view paper
  • Downloaded 175 times
  • Download rankings, all-time:
    • Site-wide: 128,666
    • In evolutionary biology: 6,406
  • Year to date:
    • Site-wide: 36,223
  • Since beginning of last month:
    • Site-wide: 44,806

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