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Author: Zhiping Weng

Rankings

  • All-time downloads: 18,931 (rank: 3,617 out of 425,580)
  • Categories:
    • bioinformatics: 2,283 (rank: 5,115 (tie) out of 36,105)
    • cancer biology: 508 (rank: 12,874 (tie) out of 30,374)
    • genetics: 5,095 (rank: 3,381 out of 37,881)
    • genomics: 11,045 (rank: 1,370 out of 44,426)

Downloads per author, site-wide

Preprints

Compartment-dependent chromatin interaction dynamics revealed by liquid chromatin Hi-C

genomics more details view paper
  • Downloaded 3,207 times
  • Download rankings, all-time:
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    • In genomics: 369 out of 6,246
  • Year to date:
    • Site-wide: 1,803 out of 100,737
  • Since beginning of last month:
    • Site-wide: 1,663 out of 100,737

A unified encyclopedia of human functional DNA elements through fully automated annotation of 164 human cell types

genomics more details view paper
  • Downloaded 2,442 times
  • Download rankings, all-time:
    • Site-wide: 2,977 out of 100,737
    • In genomics: 537 out of 6,246
  • Year to date:
    • Site-wide: 25,291 out of 100,737
  • Since beginning of last month:
    • Site-wide: 26,911 out of 100,737

Elimination of PCR duplicates in RNA-seq and small RNA-seq using unique molecular identifiers

genomics more details view paper
  • Downloaded 1,648 times
  • Download rankings, all-time:
    • Site-wide: 5,719 out of 100,737
    • In genomics: 902 out of 6,246
  • Year to date:
    • Site-wide: 41,086 out of 100,737
  • Since beginning of last month:
    • Site-wide: None out of 100,737

Genome-Wide Identification of Early-Firing Human Replication Origins by Optical Replication Mapping

genomics more details view paper
  • Downloaded 1,198 times
  • Download rankings, all-time:
    • Site-wide: 9,840 out of 100,737
    • In genomics: 1,400 out of 6,246
  • Year to date:
    • Site-wide: 25,116 out of 100,737
  • Since beginning of last month:
    • Site-wide: 30,614 out of 100,737

An Evolutionarily Conserved piRNA-producing Locus Required for Male Mouse Fertility

genetics more details view paper
  • Downloaded 1,196 times
  • Download rankings, all-time:
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    • In genetics: 661 out of 5,016
  • Year to date:
    • Site-wide: 11,414 out of 100,737
  • Since beginning of last month:
    • Site-wide: 17,175 out of 100,737

Identification of piRNA binding sites reveals the Argonaute regulatory landscape of the C. elegans germline

genetics more details view paper
  • Downloaded 971 times
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    • In genetics: 880 out of 5,016
  • Year to date:
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The genome of Trichoplusia ni, an agricultural pest and novel model for small RNA biology

genomics more details view paper
  • Downloaded 956 times
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    • Site-wide: 14,143 out of 100,737
    • In genomics: 1,845 out of 6,246
  • Year to date:
    • Site-wide: 72,205 out of 100,737
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    • Site-wide: None out of 100,737

The RNA-binding ATPase, Armitage, Couples piRNA Amplification in Nuage to Phased piRNA Production on Mitochondria

genetics more details view paper
  • Downloaded 917 times
  • Download rankings, all-time:
    • Site-wide: 15,163 out of 100,737
    • In genetics: 959 out of 5,016
  • Year to date:
    • Site-wide: 41,183 out of 100,737
  • Since beginning of last month:
    • Site-wide: 68,404 out of 100,737

LR-DNase: Predicting TF binding from DNase-seq data

bioinformatics more details view paper
  • Downloaded 870 times
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    • Site-wide: 16,442 out of 100,737
    • In bioinformatics: 2,487 out of 9,252
  • Year to date:
    • Site-wide: 81,286 out of 100,737
  • Since beginning of last month:
    • Site-wide: 74,483 out of 100,737

Transcriptome-wide interrogation of the functional intronome by spliceosome profiling

genomics more details view paper
  • Downloaded 846 times
  • Download rankings, all-time:
    • Site-wide: 17,189 out of 100,737
    • In genomics: 2,116 out of 6,246
  • Year to date:
    • Site-wide: 64,271 out of 100,737
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    • Site-wide: None out of 100,737

The piRNA Response to Retroviral Invasion of the Koala Genome

genetics more details view paper
  • Downloaded 673 times
  • Download rankings, all-time:
    • Site-wide: 24,281 out of 100,737
    • In genetics: 1,472 out of 5,016
  • Year to date:
    • Site-wide: 37,352 out of 100,737
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    • Site-wide: None out of 100,737

Maelstrom Represses Canonical Polymerase II Transcription within Bi-Directional piRNA Clusters in Drosophila melanogaster

genetics more details view paper
  • Downloaded 550 times
  • Download rankings, all-time:
    • Site-wide: 31,760 out of 100,737
    • In genetics: 1,847 out of 5,016
  • Year to date:
    • Site-wide: 69,949 out of 100,737
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    • Site-wide: None out of 100,737

Human PGBD5 DNA transposase promotes site-specific oncogenic mutations in rhabdoid tumors

cancer biology more details view paper
  • Downloaded 508 times
  • Download rankings, all-time:
    • Site-wide: 35,187 out of 100,737
    • In cancer biology: 1,142 out of 3,609
  • Year to date:
    • Site-wide: 92,090 out of 100,737
  • Since beginning of last month:
    • Site-wide: 68,803 out of 100,737

A curated benchmark of enhancer-gene interactions for evaluating enhancer-target gene prediction methods

bioinformatics more details view paper
  • Downloaded 433 times
  • Download rankings, all-time:
    • Site-wide: 42,447 out of 100,737
    • In bioinformatics: 5,087 out of 9,252
  • Year to date:
    • Site-wide: 61,499 out of 100,737
  • Since beginning of last month:
    • Site-wide: 63,434 out of 100,737

Factorbook Motif Pipeline: A de novo motif discovery and filtering web server for ChIP-seq peaks

bioinformatics more details view paper
  • Downloaded 429 times
  • Download rankings, all-time:
    • Site-wide: 42,914 out of 100,737
    • In bioinformatics: 5,141 out of 9,252
  • Year to date:
    • Site-wide: 92,603 out of 100,737
  • Since beginning of last month:
    • Site-wide: 78,781 out of 100,737

Genome-Wide Mapping of Human DNA Replication by Optical Replication Mapping Supports a Stochastic Model of Eukaryotic Replication

genomics more details view paper
  • Downloaded 412 times
  • Download rankings, all-time:
    • Site-wide: 44,811 out of 100,737
    • In genomics: 3,985 out of 6,246
  • Year to date:
    • Site-wide: 9,740 out of 100,737
  • Since beginning of last month:
    • Site-wide: 2,913 out of 100,737

Adaptive evolution targets a piRNA precursor transcription network

genetics more details view paper
  • Downloaded 412 times
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    • Site-wide: 44,920 out of 100,737
    • In genetics: 2,515 out of 5,016
  • Year to date:
    • Site-wide: 75,134 out of 100,737
  • Since beginning of last month:
    • Site-wide: 67,113 out of 100,737

The TRIM-NHL protein NHL-2 is a Novel Co-Factor of the CSR-1 and HRDE-1 22G-RNA Pathways

genetics more details view paper
  • Downloaded 376 times
  • Download rankings, all-time:
    • Site-wide: 49,278 out of 100,737
    • In genetics: 2,756 out of 5,016
  • Year to date:
    • Site-wide: 96,844 out of 100,737
  • Since beginning of last month:
    • Site-wide: None out of 100,737

Forward genetic screen of human transposase genomic rearrangements

genomics more details view paper
  • Downloaded 336 times
  • Download rankings, all-time:
    • Site-wide: 54,842 out of 100,737
    • In genomics: 4,458 out of 6,246
  • Year to date:
    • Site-wide: 95,033 out of 100,737
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    • Site-wide: None out of 100,737

Integrating cross-linking experiments with ab initio protein-protein docking

bioinformatics more details view paper
  • Downloaded 302 times
  • Download rankings, all-time:
    • Site-wide: 59,960 out of 100,737
    • In bioinformatics: 6,523 out of 9,252
  • Year to date:
    • Site-wide: 79,322 out of 100,737
  • Since beginning of last month:
    • Site-wide: 68,676 out of 100,737

Annotation of Chromatin States in 66 Complete Mouse Epigenomes During Development

bioinformatics more details view paper
  • Downloaded 249 times
  • Download rankings, all-time:
    • Site-wide: 68,738 out of 100,737
    • In bioinformatics: 7,135 out of 9,252
  • Year to date:
    • Site-wide: 20,498 out of 100,737
  • Since beginning of last month:
    • Site-wide: None out of 100,737

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