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Author: Luca Pinello

Rankings

  • All-time downloads: 48,789 (rank: 2,567 )
  • Categories:
    • bioinformatics: 20,977 (rank: 142 )
    • cell biology: 2,877 (rank: 1,420 (tie) )
    • genetics: 2,885 (rank: 6,045 )
    • genomics: 6,292 (rank: 3,156 )
    • molecular biology: 15,758 (rank: 136 )

Downloads per author, site-wide

Preprints

Bioconda: A sustainable and comprehensive software distribution for the life sciences

bioinformatics more details view paper
  • Downloaded 5,679 times
  • Download rankings, all-time:
    • Site-wide: 1,462
    • In bioinformatics: 119
  • Year to date:
    • Site-wide: 6,975
  • Since beginning of last month:
    • Site-wide: 13,005

In vivo CRISPR-Cas gene editing with no detectable genome-wide off-target mutations

molecular biology more details view paper
  • Downloaded 5,438 times
  • Download rankings, all-time:
    • Site-wide: 1,550
    • In molecular biology: 26
  • Year to date:
    • Site-wide: 75,182
  • Since beginning of last month:
    • Site-wide: 121,286

Assessment of computational methods for the analysis of single-cell ATAC-seq data

bioinformatics more details view paper
  • Downloaded 4,967 times
  • Download rankings, all-time:
    • Site-wide: 1,745
    • In bioinformatics: 158
  • Year to date:
    • Site-wide: 2,903
  • Since beginning of last month:
    • Site-wide: 22,624

“Unexpected mutations after CRISPR-Cas9 editing in vivo” are most likely pre-existing sequence variants and not nuclease-induced mutations

molecular biology more details view paper
  • Downloaded 4,175 times
  • Download rankings, all-time:
    • Site-wide: 2,236
    • In molecular biology: 46
  • Year to date:
    • Site-wide: 13,067
  • Since beginning of last month:
    • Site-wide: 31,841

STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of omics data

genomics more details view paper
  • Downloaded 3,848 times
  • Download rankings, all-time:
    • Site-wide: 2,521
    • In genomics: 307
  • Year to date:
    • Site-wide: 25,805
  • Since beginning of last month:
    • Site-wide: 26,777

High-precision CRISPR-Cas9 base editors with minimized bystander and off-target mutations

molecular biology more details view paper
  • Downloaded 3,257 times
  • Download rankings, all-time:
    • Site-wide: 3,234
    • In molecular biology: 69
  • Year to date:
    • Site-wide: 44,317
  • Since beginning of last month:
    • Site-wide: 50,005

Integrated design, execution, and analysis of arrayed and pooled CRISPR genome editing experiments

molecular biology more details view paper
  • Downloaded 2,888 times
  • Download rankings, all-time:
    • Site-wide: 3,812
    • In molecular biology: 87
  • Year to date:
    • Site-wide: 24,201
  • Since beginning of last month:
    • Site-wide: 43,967

CRISPResso: sequencing analysis toolbox for CRISPR genome editing

bioinformatics more details view paper
  • Downloaded 2,545 times
  • Download rankings, all-time:
    • Site-wide: 4,590
    • In bioinformatics: 533
  • Year to date:
    • Site-wide: 55,509
  • Since beginning of last month:
    • Site-wide: 59,754

Detecting genome-wide directional effects of transcription factor binding on polygenic disease risk

genetics more details view paper
  • Downloaded 2,527 times
  • Download rankings, all-time:
    • Site-wide: 4,629
    • In genetics: 224
  • Year to date:
    • Site-wide: 28,890
  • Since beginning of last month:
    • Site-wide: 71,089

Aging-associated alterations in the mammary gland revealed by single-cell RNA sequencing

cell biology more details view paper
  • Downloaded 2,100 times
  • Download rankings, all-time:
    • Site-wide: 6,099
    • In cell biology: 128
  • Year to date:
    • Site-wide: 12,953
  • Since beginning of last month:
    • Site-wide: 9,427

PrimeDesign software for rapid and simplified design of prime editing guide RNAs

bioinformatics more details view paper
  • Downloaded 1,892 times
  • Download rankings, all-time:
    • Site-wide: 7,105
    • In bioinformatics: 903
  • Year to date:
    • Site-wide: 3,437
  • Since beginning of last month:
    • Site-wide: 3,522

AmpUMI: Design and analysis of unique molecular identifiers for deep amplicon sequencing

bioinformatics more details view paper
  • Downloaded 1,693 times
  • Download rankings, all-time:
    • Site-wide: 8,388
    • In bioinformatics: 1,060
  • Year to date:
    • Site-wide: 67,062
  • Since beginning of last month:
    • Site-wide: 100,714

CRISPR-SURF: Discovering regulatory elements by deconvolution of CRISPR tiling screen data

bioinformatics more details view paper
  • Downloaded 1,388 times
  • Download rankings, all-time:
    • Site-wide: 11,337
    • In bioinformatics: 1,438
  • Year to date:
    • Site-wide: 121,416
  • Since beginning of last month:
    • Site-wide: 49,561

Analysis and comparison of genome editing using CRISPResso2

bioinformatics more details view paper
  • Downloaded 1,328 times
  • Download rankings, all-time:
    • Site-wide: 12,104
    • In bioinformatics: 1,525
  • Year to date:
    • Site-wide: 38,656
  • Since beginning of last month:
    • Site-wide: 43,029

CRISPRO Identifies Functional Protein Coding Sequences Based on Genome Editing Dense Mutagenesis

bioinformatics more details view paper
  • Downloaded 923 times
  • Download rankings, all-time:
    • Site-wide: 20,819
    • In bioinformatics: 2,551
  • Year to date:
    • Site-wide: 20,205
  • Since beginning of last month:
    • Site-wide: 73,810

The role of Cdx2 as a lineage specific transcriptional repressor for pluripotent network during trophectoderm and inner cell mass specification

cell biology more details view paper
  • Downloaded 777 times
  • Download rankings, all-time:
    • Site-wide: 26,608
    • In cell biology: 1,009
  • Year to date:
    • Site-wide: 69,715
  • Since beginning of last month:
    • Site-wide: 42,778

singlecellVR: interactive visualization of single-cell data in virtual reality

genomics more details view paper
  • Downloaded 675 times
  • Download rankings, all-time:
    • Site-wide: 32,316
    • In genomics: 2,894
  • Year to date:
    • Site-wide: 36,393
  • Since beginning of last month:
    • Site-wide: 16,167

A saturating mutagenesis CRISPR-Cas9 mediated functional genomic screen identifies cis- and trans- regulatory elements of Oct4 in murine ESCs

genomics more details view paper
  • Downloaded 577 times
  • Download rankings, all-time:
    • Site-wide: 39,488
    • In genomics: 3,339
  • Year to date:
    • Site-wide: 64,110
  • Since beginning of last month:
    • Site-wide: 56,757

Haystack: systematic analysis of the variation of epigenetic states and cell-type specific regulatory elements

bioinformatics more details view paper
  • Downloaded 562 times
  • Download rankings, all-time:
    • Site-wide: 40,871
    • In bioinformatics: 4,470
  • Year to date:
    • Site-wide: 116,200
  • Since beginning of last month:
    • Site-wide: 106,449

DNA methylation is a key mechanism for maintaining monoallelic expression on autosomes

genomics more details view paper
  • Downloaded 532 times
  • Download rankings, all-time:
    • Site-wide: 43,656
    • In genomics: 3,587
  • Year to date:
    • Site-wide: 34,841
  • Since beginning of last month:
    • Site-wide: 33,923

Forward genetic screen of human transposase genomic rearrangements

genomics more details view paper
  • Downloaded 359 times
  • Download rankings, all-time:
    • Site-wide: 66,197
    • In genomics: 4,712
  • Year to date:
    • Site-wide: 114,629
  • Since beginning of last month:
    • Site-wide: 113,915

ZNF410 represses fetal globin by devoted control of CHD4/NuRD

genetics more details view paper
  • Downloaded 358 times
  • Download rankings, all-time:
    • Site-wide: 66,297
    • In genetics: 3,157
  • Year to date:
    • Site-wide: 10,125
  • Since beginning of last month:
    • Site-wide: 14,597

Histone demethylome map reveals combinatorial gene regulatory functions in embryonic stem cells

genomics more details view paper
  • Downloaded 301 times
  • Download rankings, all-time:
    • Site-wide: 76,440
    • In genomics: 5,132
  • Year to date:
    • Site-wide: 78,257
  • Since beginning of last month:
    • Site-wide: 19,378

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