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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 70,177 bioRxiv papers from 306,444 authors.

Author: Sophien Kamoun

Rankings

  • All-time downloads: 31,655 (rank: 621 out of 306,448)
  • Categories:
    • bioinformatics: 960 (rank: 8,941 (tie) out of 26,728)
    • genomics: 4,007 (rank: 3,809 out of 34,686)
    • molecular biology: 825 (rank: 2,854 (tie) out of 14,954)
    • plant biology: 25,863 (rank: 1 out of 11,184)

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Preprints

Recently expanded clonal lineages of the rice blast fungus display distinct patterns of presence/absence of effector genes

evolutionary biology more details view paper

No bioRxiv download data for this paper yet.

Genomic rearrangements generate hypervariable mini-chromosomes in host-specific lineages of the blast fungus

genomics more details view paper

No bioRxiv download data for this paper yet.

RUST FUNGAL EFFECTORS MIMIC HOST TRANSIT PEPTIDES TO TRANSLOCATE INTO CHLOROPLASTS

plant biology more details view paper
  • Downloaded 2,292 times
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    • In plant biology: 25 out of 2,059
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Emergence of wheat blast in Bangladesh was caused by a South American lineage of Magnaporthe oryzae

plant biology more details view paper
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NLR signaling network mediates immunity to diverse plant pathogens

plant biology more details view paper
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    • In plant biology: 44 out of 2,059
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Lessons in effector and NLR biology of plant-microbe systems

plant biology more details view paper
  • Downloaded 1,733 times
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    • In plant biology: 49 out of 2,059
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The two-speed genomes of filamentous pathogens: waltz with plants

genomics more details view paper
  • Downloaded 1,669 times
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    • In genomics: 660 out of 4,698
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The coming of age of EvoMPMI: evolutionary molecular plant-microbe interactions across multiple timescales

plant biology more details view paper
  • Downloaded 1,582 times
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    • In plant biology: 60 out of 2,059
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Cell re-entry assays do not support models of pathogen- independent translocation of AvrM and AVR3a effectors into plant cells

plant biology more details view paper
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    • In plant biology: 61 out of 2,059
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In planta expression screens of candidate effector proteins from the wheat yellow rust fungus reveal processing bodies as a pathogen-targeted plant cell compartment

plant biology more details view paper
  • Downloaded 1,528 times
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    • In plant biology: 69 out of 2,059
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    • Site-wide: 41,000 out of 70,177

Crowdsourced analysis of ash and ash dieback through the Open Ash Dieback project: A year 1 report on datasets and analyses contributed by a self-organising community.

genomics more details view paper
  • Downloaded 1,513 times
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    • In genomics: 747 out of 4,698
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    • Site-wide: 44,755 out of 70,177

Arabidopsis late blight: Infection of a nonhost plant by Albugo laibachii enables full colonization by Phytophthora infestans

plant biology more details view paper
  • Downloaded 1,382 times
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    • In plant biology: 80 out of 2,059
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An N-terminal motif in NLR immune receptors is functionally conserved across distantly related plant species

plant biology more details view paper
  • Downloaded 1,350 times
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    • In plant biology: 84 out of 2,059
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    • Site-wide: 4,589 out of 70,177

The NLR helper protein NRC3 but not NRC1 is required for Pto-mediated cell death in Nicotiana benthamiana

plant biology more details view paper
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Phytophthora infestans RXLR-WY effector AVR3a associates with a Dynamin-Related Protein involved in endocytosis of a plant pattern recognition receptor

plant biology more details view paper
  • Downloaded 1,243 times
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    • In plant biology: 102 out of 2,059
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    • Site-wide: 35,021 out of 70,177

Tomato I2 immune receptor can be engineered to confer partial resistance to the oomycete Phytophthora infestans in addition to the fungus Fusarium oxysporum

plant biology more details view paper
  • Downloaded 1,142 times
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    • In plant biology: 123 out of 2,059
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N-terminal β-strand underpins biochemical specialization of an ATG8 isoform

plant biology more details view paper
  • Downloaded 1,091 times
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    • Site-wide: 7,111 out of 70,177
    • In plant biology: 139 out of 2,059
  • Year to date:
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Host autophagosomes are diverted to a plant-pathogen interface

plant biology more details view paper
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    • In plant biology: 159 out of 2,059
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    • Site-wide: 68,332 out of 70,177

nQuire: A Statistical Framework For Ploidy Estimation Using Next Generation Sequencing

bioinformatics more details view paper
  • Downloaded 960 times
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    • Site-wide: 8,742 out of 70,177
    • In bioinformatics: 1,520 out of 6,883
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    • Site-wide: 45,896 out of 70,177

Gene expression polymorphism underpins evasion of host immunity in an asexual lineage of the Irish potato famine pathogen

plant biology more details view paper
  • Downloaded 898 times
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    • In plant biology: 204 out of 2,059
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Editing of the urease gene by CRISPR-Cas in the diatom Thalassiosira pseudonana

genomics more details view paper
  • Downloaded 825 times
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    • In genomics: 1,608 out of 4,698
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    • Site-wide: None out of 70,177
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    • Site-wide: 62,803 out of 70,177

Phytophthora methylomes modulated by expanded 6mA methyltransferases are associated with adaptive genome regions

molecular biology more details view paper
  • Downloaded 825 times
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    • In molecular biology: 320 out of 2,259
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    • Site-wide: 44,249 out of 70,177
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    • Site-wide: 15,807 out of 70,177

Protein engineering expands the effector recognition profile of a rice NLR immune receptor

plant biology more details view paper
  • Downloaded 736 times
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    • In plant biology: 308 out of 2,059
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    • Site-wide: 22,660 out of 70,177
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    • Site-wide: 42,284 out of 70,177

The potato NLR immune receptor R3a does not contain non-canonical integrated domains

plant biology more details view paper
  • Downloaded 696 times
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    • Site-wide: 14,242 out of 70,177
    • In plant biology: 337 out of 2,059
  • Year to date:
    • Site-wide: 56,413 out of 70,177
  • Since beginning of last month:
    • Site-wide: 65,264 out of 70,177

The MoT3 assay does not distinguish between Magnaporthe oryzae wheat and rice blast isolates from Bangladesh

plant biology more details view paper
  • Downloaded 588 times
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    • Site-wide: 18,111 out of 70,177
    • In plant biology: 440 out of 2,059
  • Year to date:
    • Site-wide: 47,531 out of 70,177
  • Since beginning of last month:
    • Site-wide: 55,300 out of 70,177

Cross-reactivity of a rice NLR immune receptor to distinct effectors from the blast pathogen leads to partial disease resistance

plant biology more details view paper
  • Downloaded 565 times
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    • Site-wide: 19,118 out of 70,177
    • In plant biology: 476 out of 2,059
  • Year to date:
    • Site-wide: 49,182 out of 70,177
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    • Site-wide: 38,685 out of 70,177

A CRISPR/Cas9 mediated 53 kb deletion of the NRC4 gene cluster of tomato does not affect bacterial flagellin-triggered immunity

plant biology more details view paper
  • Downloaded 478 times
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    • Site-wide: 23,664 out of 70,177
    • In plant biology: 628 out of 2,059
  • Year to date:
    • Site-wide: 26,822 out of 70,177
  • Since beginning of last month:
    • Site-wide: 28,757 out of 70,177

Tomato Prf requires NLR helpers NRC2 and NRC3 to confer resistance against the bacterial speck pathogen Pseudomonas syringae pv. tomato

plant biology more details view paper
  • Downloaded 457 times
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    • Site-wide: 24,969 out of 70,177
    • In plant biology: 662 out of 2,059
  • Year to date:
    • Site-wide: 32,406 out of 70,177
  • Since beginning of last month:
    • Site-wide: 23,622 out of 70,177

Cleavage of a pathogen apoplastic protein by plant subtilases activates immunity

plant biology more details view paper
  • Downloaded 396 times
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    • Site-wide: 29,273 out of 70,177
    • In plant biology: 815 out of 2,059
  • Year to date:
    • Site-wide: 229 out of 70,177
  • Since beginning of last month:
    • Site-wide: 415 out of 70,177

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