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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 65,085 bioRxiv papers from 288,450 authors.

Author: Sophien Kamoun

Rankings

  • All-time downloads: 28,488 (rank: 666 out of 288,450)
  • Categories:
    • bioinformatics: 943 (rank: 8,215 (tie) out of 25,177)
    • genomics: 3,952 (rank: 3,627 out of 32,823)
    • plant biology: 23,593 (rank: 1 out of 10,197)

Downloads per author, site-wide

Preprints

RUST FUNGAL EFFECTORS MIMIC HOST TRANSIT PEPTIDES TO TRANSLOCATE INTO CHLOROPLASTS

plant biology more details view paper
  • Downloaded 2,259 times
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    • Site-wide: 1,895 out of 65,085
    • In plant biology: 24 out of 1,859
  • Year to date:
    • Site-wide: 44,657 out of 65,085
  • Since beginning of last month:
    • Site-wide: 30,995 out of 65,085

NLR signaling network mediates immunity to diverse plant pathogens

plant biology more details view paper
  • Downloaded 1,818 times
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    • Site-wide: 2,749 out of 65,085
    • In plant biology: 40 out of 1,859
  • Year to date:
    • Site-wide: 27,491 out of 65,085
  • Since beginning of last month:
    • Site-wide: 24,317 out of 65,085

Lessons in effector and NLR biology of plant-microbe systems

plant biology more details view paper
  • Downloaded 1,703 times
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    • Site-wide: 3,087 out of 65,085
    • In plant biology: 48 out of 1,859
  • Year to date:
    • Site-wide: 25,873 out of 65,085
  • Since beginning of last month:
    • Site-wide: 19,332 out of 65,085

The two-speed genomes of filamentous pathogens: waltz with plants

genomics more details view paper
  • Downloaded 1,635 times
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    • Site-wide: 3,285 out of 65,085
    • In genomics: 631 out of 4,449
  • Year to date:
    • Site-wide: 25,260 out of 65,085
  • Since beginning of last month:
    • Site-wide: 25,822 out of 65,085

Cell re-entry assays do not support models of pathogen- independent translocation of AvrM and AVR3a effectors into plant cells

plant biology more details view paper
  • Downloaded 1,563 times
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    • Site-wide: 3,541 out of 65,085
    • In plant biology: 59 out of 1,859
  • Year to date:
    • Site-wide: 40,163 out of 65,085
  • Since beginning of last month:
    • Site-wide: 47,732 out of 65,085

The coming of age of EvoMPMI: evolutionary molecular plant-microbe interactions across multiple timescales

plant biology more details view paper
  • Downloaded 1,548 times
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    • Site-wide: 3,593 out of 65,085
    • In plant biology: 62 out of 1,859
  • Year to date:
    • Site-wide: 9,975 out of 65,085
  • Since beginning of last month:
    • Site-wide: 15,814 out of 65,085

In planta expression screens of candidate effector proteins from the wheat yellow rust fungus reveal processing bodies as a pathogen-targeted plant cell compartment

plant biology more details view paper
  • Downloaded 1,513 times
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    • Site-wide: 3,746 out of 65,085
    • In plant biology: 64 out of 1,859
  • Year to date:
    • Site-wide: 25,805 out of 65,085
  • Since beginning of last month:
    • Site-wide: 16,919 out of 65,085

Crowdsourced analysis of ash and ash dieback through the Open Ash Dieback project: A year 1 report on datasets and analyses contributed by a self-organising community.

genomics more details view paper
  • Downloaded 1,501 times
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    • Site-wide: 3,795 out of 65,085
    • In genomics: 696 out of 4,449
  • Year to date:
    • Site-wide: 40,774 out of 65,085
  • Since beginning of last month:
    • Site-wide: 37,208 out of 65,085

Arabidopsis late blight: Infection of a nonhost plant by Albugo laibachii enables full colonization by Phytophthora infestans

plant biology more details view paper
  • Downloaded 1,352 times
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    • Site-wide: 4,542 out of 65,085
    • In plant biology: 76 out of 1,859
  • Year to date:
    • Site-wide: 35,387 out of 65,085
  • Since beginning of last month:
    • Site-wide: 42,356 out of 65,085

The NLR helper protein NRC3 but not NRC1 is required for Pto-mediated cell death in Nicotiana benthamiana

plant biology more details view paper
  • Downloaded 1,247 times
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    • Site-wide: 5,156 out of 65,085
    • In plant biology: 91 out of 1,859
  • Year to date:
    • Site-wide: 39,888 out of 65,085
  • Since beginning of last month:
    • Site-wide: 25,058 out of 65,085

Phytophthora infestans RXLR-WY effector AVR3a associates with a Dynamin-Related Protein involved in endocytosis of a plant pattern recognition receptor

plant biology more details view paper
  • Downloaded 1,222 times
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    • Site-wide: 5,343 out of 65,085
    • In plant biology: 96 out of 1,859
  • Year to date:
    • Site-wide: 45,026 out of 65,085
  • Since beginning of last month:
    • Site-wide: 56,001 out of 65,085

An N-terminal motif in NLR immune receptors is functionally conserved across distantly related plant species

plant biology more details view paper
  • Downloaded 1,175 times
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    • Site-wide: 5,706 out of 65,085
    • In plant biology: 106 out of 1,859
  • Year to date:
    • Site-wide: 1,310 out of 65,085
  • Since beginning of last month:
    • Site-wide: 3,929 out of 65,085

Tomato I2 immune receptor can be engineered to confer partial resistance to the oomycete Phytophthora infestans in addition to the fungus Fusarium oxysporum

plant biology more details view paper
  • Downloaded 1,129 times
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    • Site-wide: 6,117 out of 65,085
    • In plant biology: 112 out of 1,859
  • Year to date:
    • Site-wide: 43,859 out of 65,085
  • Since beginning of last month:
    • Site-wide: 45,043 out of 65,085

N-terminal β-strand underpins biochemical specialization of an ATG8 isoform

plant biology more details view paper
  • Downloaded 1,063 times
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    • Site-wide: 6,767 out of 65,085
    • In plant biology: 128 out of 1,859
  • Year to date:
    • Site-wide: 3,475 out of 65,085
  • Since beginning of last month:
    • Site-wide: 16,089 out of 65,085

Host autophagosomes are diverted to a plant-pathogen interface

plant biology more details view paper
  • Downloaded 984 times
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    • Site-wide: 7,621 out of 65,085
    • In plant biology: 144 out of 1,859
  • Year to date:
    • Site-wide: 40,075 out of 65,085
  • Since beginning of last month:
    • Site-wide: 48,039 out of 65,085

nQuire: A Statistical Framework For Ploidy Estimation Using Next Generation Sequencing

bioinformatics more details view paper
  • Downloaded 943 times
  • Download rankings, all-time:
    • Site-wide: 8,172 out of 65,085
    • In bioinformatics: 1,430 out of 6,446
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    • Site-wide: 40,213 out of 65,085
  • Since beginning of last month:
    • Site-wide: 52,630 out of 65,085

Gene expression polymorphism underpins evasion of host immunity in an asexual lineage of the Irish potato famine pathogen

plant biology more details view paper
  • Downloaded 887 times
  • Download rankings, all-time:
    • Site-wide: 9,032 out of 65,085
    • In plant biology: 191 out of 1,859
  • Year to date:
    • Site-wide: 54,007 out of 65,085
  • Since beginning of last month:
    • Site-wide: 54,257 out of 65,085

Editing of the urease gene by CRISPR-Cas in the diatom Thalassiosira pseudonana

genomics more details view paper
  • Downloaded 816 times
  • Download rankings, all-time:
    • Site-wide: 10,236 out of 65,085
    • In genomics: 1,500 out of 4,449
  • Year to date:
    • Site-wide: 51,682 out of 65,085
  • Since beginning of last month:
    • Site-wide: 52,584 out of 65,085

An unconventional NOI/RIN4 domain of a rice NLR protein binds host EXO70 protein to confer fungal immunity

plant biology more details view paper
  • Downloaded 789 times
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    • Site-wide: 10,762 out of 65,085
    • In plant biology: 245 out of 1,859
  • Year to date:
    • Site-wide: 23,003 out of 65,085
  • Since beginning of last month:
    • Site-wide: 17,245 out of 65,085

Protein engineering expands the effector recognition profile of a rice NLR immune receptor

plant biology more details view paper
  • Downloaded 702 times
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    • Site-wide: 12,837 out of 65,085
    • In plant biology: 302 out of 1,859
  • Year to date:
    • Site-wide: 3,236 out of 65,085
  • Since beginning of last month:
    • Site-wide: 25,350 out of 65,085

The potato NLR immune receptor R3a does not contain non-canonical integrated domains

plant biology more details view paper
  • Downloaded 689 times
  • Download rankings, all-time:
    • Site-wide: 13,160 out of 65,085
    • In plant biology: 310 out of 1,859
  • Year to date:
    • Site-wide: 47,568 out of 65,085
  • Since beginning of last month:
    • Site-wide: 38,270 out of 65,085

The MoT3 assay does not distinguish between Magnaporthe oryzae wheat and rice blast isolates from Bangladesh

plant biology more details view paper
  • Downloaded 574 times
  • Download rankings, all-time:
    • Site-wide: 16,928 out of 65,085
    • In plant biology: 416 out of 1,859
  • Year to date:
    • Site-wide: 27,183 out of 65,085
  • Since beginning of last month:
    • Site-wide: 24,660 out of 65,085

Cross-reactivity of a rice NLR immune receptor to distinct effectors from the blast pathogen leads to partial disease resistance

plant biology more details view paper
  • Downloaded 545 times
  • Download rankings, all-time:
    • Site-wide: 18,152 out of 65,085
    • In plant biology: 453 out of 1,859
  • Year to date:
    • Site-wide: 4,973 out of 65,085
  • Since beginning of last month:
    • Site-wide: 19,792 out of 65,085

Tomato Prf requires NLR helpers NRC2 and NRC3 to confer resistance against the bacterial speck pathogen Pseudomonas syringae pv. tomato

plant biology more details view paper
  • Downloaded 421 times
  • Download rankings, all-time:
    • Site-wide: 24,795 out of 65,085
    • In plant biology: 670 out of 1,859
  • Year to date:
    • Site-wide: 7,641 out of 65,085
  • Since beginning of last month:
    • Site-wide: 10,422 out of 65,085

A CRISPR/Cas9 mediated 53 kb deletion of the NRC4 gene cluster of tomato does not affect bacterial flagellin-triggered immunity

plant biology more details view paper
  • Downloaded 410 times
  • Download rankings, all-time:
    • Site-wide: 25,537 out of 65,085
    • In plant biology: 688 out of 1,859
  • Year to date:
    • Site-wide: 7,975 out of 65,085
  • Since beginning of last month:
    • Site-wide: 14,834 out of 65,085

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