Rxivist logo

Author: Sophien Kamoun

Rankings

  • All-time downloads: 38,215 (rank: 998 (tie) out of 383,765)
  • Categories:
    • bioinformatics: 1,034 (rank: 10,769 (tie) out of 32,829)
    • evolutionary biology: 690 (rank: 7,423 (tie) out of 19,667)
    • genomics: 4,917 (rank: 3,771 (tie) out of 40,849)
    • molecular biology: 926 (rank: 3,884 (tie) out of 19,945)
    • plant biology: 30,648 (rank: 1 out of 14,653)

Downloads per author, site-wide

Preprints

RefPlantNLR: a comprehensive collection of experimentally validated plant NLRs

plant biology more details view paper

No bioRxiv download data for this paper yet.

RUST FUNGAL EFFECTORS MIMIC HOST TRANSIT PEPTIDES TO TRANSLOCATE INTO CHLOROPLASTS

plant biology more details view paper
  • Downloaded 2,405 times
  • Download rankings, all-time:
    • Site-wide: 2,700 out of 89,568
    • In plant biology: 27 out of 2,762
  • Year to date:
    • Site-wide: 33,267 out of 89,568
  • Since beginning of last month:
    • Site-wide: 35,275 out of 89,568

Emergence of wheat blast in Bangladesh was caused by a South American lineage of Magnaporthe oryzae

plant biology more details view paper
  • Downloaded 2,103 times
  • Download rankings, all-time:
    • Site-wide: 3,376 out of 89,568
    • In plant biology: 43 out of 2,762
  • Year to date:
    • Site-wide: 50,444 out of 89,568
  • Since beginning of last month:
    • Site-wide: 52,297 out of 89,568

NLR signaling network mediates immunity to diverse plant pathogens

plant biology more details view paper
  • Downloaded 1,940 times
  • Download rankings, all-time:
    • Site-wide: 3,853 out of 89,568
    • In plant biology: 56 out of 2,762
  • Year to date:
    • Site-wide: 36,154 out of 89,568
  • Since beginning of last month:
    • Site-wide: 58,895 out of 89,568

Lessons in effector and NLR biology of plant-microbe systems

plant biology more details view paper
  • Downloaded 1,864 times
  • Download rankings, all-time:
    • Site-wide: 4,113 out of 89,568
    • In plant biology: 60 out of 2,762
  • Year to date:
    • Site-wide: 28,119 out of 89,568
  • Since beginning of last month:
    • Site-wide: 24,070 out of 89,568

The two-speed genomes of filamentous pathogens: waltz with plants

genomics more details view paper
  • Downloaded 1,834 times
  • Download rankings, all-time:
    • Site-wide: 4,228 out of 89,568
    • In genomics: 725 out of 5,703
  • Year to date:
    • Site-wide: 19,840 out of 89,568
  • Since beginning of last month:
    • Site-wide: 29,720 out of 89,568

The coming of age of EvoMPMI: evolutionary molecular plant-microbe interactions across multiple timescales

plant biology more details view paper
  • Downloaded 1,677 times
  • Download rankings, all-time:
    • Site-wide: 4,899 out of 89,568
    • In plant biology: 71 out of 2,762
  • Year to date:
    • Site-wide: 40,220 out of 89,568
  • Since beginning of last month:
    • Site-wide: 20,097 out of 89,568

Cell re-entry assays do not support models of pathogen- independent translocation of AvrM and AVR3a effectors into plant cells

plant biology more details view paper
  • Downloaded 1,652 times
  • Download rankings, all-time:
    • Site-wide: 5,028 out of 89,568
    • In plant biology: 73 out of 2,762
  • Year to date:
    • Site-wide: 52,127 out of 89,568
  • Since beginning of last month:
    • Site-wide: 63,894 out of 89,568

In planta expression screens of candidate effector proteins from the wheat yellow rust fungus reveal processing bodies as a pathogen-targeted plant cell compartment

plant biology more details view paper
  • Downloaded 1,605 times
  • Download rankings, all-time:
    • Site-wide: 5,249 out of 89,568
    • In plant biology: 79 out of 2,762
  • Year to date:
    • Site-wide: 52,347 out of 89,568
  • Since beginning of last month:
    • Site-wide: 50,161 out of 89,568

Crowdsourced analysis of ash and ash dieback through the Open Ash Dieback project: A year 1 report on datasets and analyses contributed by a self-organising community.

genomics more details view paper
  • Downloaded 1,587 times
  • Download rankings, all-time:
    • Site-wide: 5,360 out of 89,568
    • In genomics: 889 out of 5,703
  • Year to date:
    • Site-wide: 53,584 out of 89,568
  • Since beginning of last month:
    • Site-wide: 38,167 out of 89,568

An N-terminal motif in NLR immune receptors is functionally conserved across distantly related plant species

plant biology more details view paper
  • Downloaded 1,534 times
  • Download rankings, all-time:
    • Site-wide: 5,687 out of 89,568
    • In plant biology: 86 out of 2,762
  • Year to date:
    • Site-wide: 15,888 out of 89,568
  • Since beginning of last month:
    • Site-wide: 22,955 out of 89,568

Arabidopsis late blight: Infection of a nonhost plant by Albugo laibachii enables full colonization by Phytophthora infestans

plant biology more details view paper
  • Downloaded 1,435 times
  • Download rankings, all-time:
    • Site-wide: 6,346 out of 89,568
    • In plant biology: 94 out of 2,762
  • Year to date:
    • Site-wide: 67,564 out of 89,568
  • Since beginning of last month:
    • Site-wide: 71,787 out of 89,568

The NLR helper protein NRC3 but not NRC1 is required for Pto-mediated cell death in Nicotiana benthamiana

plant biology more details view paper
  • Downloaded 1,371 times
  • Download rankings, all-time:
    • Site-wide: 6,836 out of 89,568
    • In plant biology: 111 out of 2,762
  • Year to date:
    • Site-wide: 38,117 out of 89,568
  • Since beginning of last month:
    • Site-wide: 64,620 out of 89,568

Phytophthora infestans RXLR-WY effector AVR3a associates with a Dynamin-Related Protein involved in endocytosis of a plant pattern recognition receptor

plant biology more details view paper
  • Downloaded 1,297 times
  • Download rankings, all-time:
    • Site-wide: 7,506 out of 89,568
    • In plant biology: 129 out of 2,762
  • Year to date:
    • Site-wide: 68,477 out of 89,568
  • Since beginning of last month:
    • Site-wide: 46,657 out of 89,568

Tomato I2 immune receptor can be engineered to confer partial resistance to the oomycete Phytophthora infestans in addition to the fungus Fusarium oxysporum

plant biology more details view paper
  • Downloaded 1,192 times
  • Download rankings, all-time:
    • Site-wide: 8,655 out of 89,568
    • In plant biology: 153 out of 2,762
  • Year to date:
    • Site-wide: 72,999 out of 89,568
  • Since beginning of last month:
    • Site-wide: 60,391 out of 89,568

N-terminal β-strand underpins biochemical specialization of an ATG8 isoform

plant biology more details view paper
  • Downloaded 1,181 times
  • Download rankings, all-time:
    • Site-wide: 8,783 out of 89,568
    • In plant biology: 154 out of 2,762
  • Year to date:
    • Site-wide: 43,572 out of 89,568
  • Since beginning of last month:
    • Site-wide: 60,219 out of 89,568

Host autophagosomes are diverted to a plant-pathogen interface

plant biology more details view paper
  • Downloaded 1,058 times
  • Download rankings, all-time:
    • Site-wide: 10,518 out of 89,568
    • In plant biology: 196 out of 2,762
  • Year to date:
    • Site-wide: 65,755 out of 89,568
  • Since beginning of last month:
    • Site-wide: 53,104 out of 89,568

nQuire: A Statistical Framework For Ploidy Estimation Using Next Generation Sequencing

bioinformatics more details view paper
  • Downloaded 1,034 times
  • Download rankings, all-time:
    • Site-wide: 10,950 out of 89,568
    • In bioinformatics: 1,777 out of 8,443
  • Year to date:
    • Site-wide: 52,686 out of 89,568
  • Since beginning of last month:
    • Site-wide: 37,331 out of 89,568

Gene expression polymorphism underpins evasion of host immunity in an asexual lineage of the Irish potato famine pathogen

plant biology more details view paper
  • Downloaded 955 times
  • Download rankings, all-time:
    • Site-wide: 12,397 out of 89,568
    • In plant biology: 254 out of 2,762
  • Year to date:
    • Site-wide: 66,901 out of 89,568
  • Since beginning of last month:
    • Site-wide: 65,472 out of 89,568

Phytophthora methylomes modulated by expanded 6mA methyltransferases are associated with adaptive genome regions

molecular biology more details view paper
  • Downloaded 926 times
  • Download rankings, all-time:
    • Site-wide: 13,002 out of 89,568
    • In molecular biology: 424 out of 3,037
  • Year to date:
    • Site-wide: 38,894 out of 89,568
  • Since beginning of last month:
    • Site-wide: 35,133 out of 89,568

An unconventional NOI/RIN4 domain of a rice NLR protein binds host EXO70 protein to confer fungal immunity

plant biology more details view paper
  • Downloaded 925 times
  • Download rankings, all-time:
    • Site-wide: 13,022 out of 89,568
    • In plant biology: 274 out of 2,762
  • Year to date:
    • Site-wide: 35,786 out of 89,568
  • Since beginning of last month:
    • Site-wide: 40,153 out of 89,568

Editing of the urease gene by CRISPR-Cas in the diatom Thalassiosira pseudonana

genomics more details view paper
  • Downloaded 887 times
  • Download rankings, all-time:
    • Site-wide: 13,936 out of 89,568
    • In genomics: 1,848 out of 5,703
  • Year to date:
    • Site-wide: 64,179 out of 89,568
  • Since beginning of last month:
    • Site-wide: 37,964 out of 89,568

Protein engineering expands the effector recognition profile of a rice NLR immune receptor

plant biology more details view paper
  • Downloaded 832 times
  • Download rankings, all-time:
    • Site-wide: 15,376 out of 89,568
    • In plant biology: 330 out of 2,762
  • Year to date:
    • Site-wide: 39,239 out of 89,568
  • Since beginning of last month:
    • Site-wide: 75,289 out of 89,568

The potato NLR immune receptor R3a does not contain non-canonical integrated domains

plant biology more details view paper
  • Downloaded 756 times
  • Download rankings, all-time:
    • Site-wide: 17,859 out of 89,568
    • In plant biology: 398 out of 2,762
  • Year to date:
    • Site-wide: 64,938 out of 89,568
  • Since beginning of last month:
    • Site-wide: 62,628 out of 89,568

Recently expanded clonal lineages of the rice blast fungus display distinct patterns of presence/absence of effector genes

evolutionary biology more details view paper
  • Downloaded 690 times
  • Download rankings, all-time:
    • Site-wide: 20,376 out of 89,568
    • In evolutionary biology: 1,298 out of 5,474
  • Year to date:
    • Site-wide: 2,515 out of 89,568
  • Since beginning of last month:
    • Site-wide: 9,756 out of 89,568

Cleavage of a pathogen apoplastic protein by plant subtilases activates immunity

plant biology more details view paper
  • Downloaded 672 times
  • Download rankings, all-time:
    • Site-wide: 21,239 out of 89,568
    • In plant biology: 481 out of 2,762
  • Year to date:
    • Site-wide: 5,649 out of 89,568
  • Since beginning of last month:
    • Site-wide: 14,541 out of 89,568

The MoT3 assay does not distinguish between Magnaporthe oryzae wheat and rice blast isolates from Bangladesh

plant biology more details view paper
  • Downloaded 654 times
  • Download rankings, all-time:
    • Site-wide: 22,081 out of 89,568
    • In plant biology: 507 out of 2,762
  • Year to date:
    • Site-wide: 58,543 out of 89,568
  • Since beginning of last month:
    • Site-wide: 54,164 out of 89,568

Tomato Prf requires NLR helpers NRC2 and NRC3 to confer resistance against the bacterial speck pathogen Pseudomonas syringae pv. tomato

plant biology more details view paper
  • Downloaded 650 times
  • Download rankings, all-time:
    • Site-wide: 22,281 out of 89,568
    • In plant biology: 519 out of 2,762
  • Year to date:
    • Site-wide: 16,845 out of 89,568
  • Since beginning of last month:
    • Site-wide: 21,629 out of 89,568

Cross-reactivity of a rice NLR immune receptor to distinct effectors from the blast pathogen leads to partial disease resistance

plant biology more details view paper
  • Downloaded 643 times
  • Download rankings, all-time:
    • Site-wide: 22,618 out of 89,568
    • In plant biology: 532 out of 2,762
  • Year to date:
    • Site-wide: 50,490 out of 89,568
  • Since beginning of last month:
    • Site-wide: 30,430 out of 89,568

The Irish potato famine pathogen subverts host vesicle trafficking to channel starvation-induced autophagy to the pathogen interface

plant biology more details view paper
  • Downloaded 634 times
  • Download rankings, all-time:
    • Site-wide: 23,076 out of 89,568
    • In plant biology: 545 out of 2,762
  • Year to date:
    • Site-wide: 2,859 out of 89,568
  • Since beginning of last month:
    • Site-wide: 11,243 out of 89,568

Genomic rearrangements generate hypervariable mini-chromosomes in host-specific lineages of the blast fungus

genomics more details view paper
  • Downloaded 609 times
  • Download rankings, all-time:
    • Site-wide: 24,397 out of 89,568
    • In genomics: 2,673 out of 5,703
  • Year to date:
    • Site-wide: 3,031 out of 89,568
  • Since beginning of last month:
    • Site-wide: 10,734 out of 89,568

A CRISPR/Cas9 mediated 53 kb deletion of the NRC4 gene cluster of tomato does not affect bacterial flagellin-triggered immunity

plant biology more details view paper
  • Downloaded 548 times
  • Download rankings, all-time:
    • Site-wide: 28,054 out of 89,568
    • In plant biology: 713 out of 2,762
  • Year to date:
    • Site-wide: 54,075 out of 89,568
  • Since beginning of last month:
    • Site-wide: 63,943 out of 89,568

A complex resistance locus in Solanum americanum recognizes a conserved Phytophthora effector

plant biology more details view paper
  • Downloaded 423 times
  • Download rankings, all-time:
    • Site-wide: 38,311 out of 89,568
    • In plant biology: 1,054 out of 2,762
  • Year to date:
    • Site-wide: 5,287 out of 89,568
  • Since beginning of last month:
    • Site-wide: 1,911 out of 89,568

A vector system for fast-forward in vivo studies of the ZAR1 resistosome in the model plant Nicotiana benthamiana

plant biology more details view paper
  • Downloaded 365 times
  • Download rankings, all-time:
    • Site-wide: 44,743 out of 89,568
    • In plant biology: 1,251 out of 2,762
  • Year to date:
    • Site-wide: 6,635 out of 89,568
  • Since beginning of last month:
    • Site-wide: 6,186 out of 89,568

The rice NLR pair Pikp-1/Pikp-2 initiates cell death through receptor cooperation rather than negative regulation

plant biology more details view paper
  • Downloaded 277 times
  • Download rankings, all-time:
    • Site-wide: 56,840 out of 89,568
    • In plant biology: 1,680 out of 2,762
  • Year to date:
    • Site-wide: 10,236 out of 89,568
  • Since beginning of last month:
    • Site-wide: 1,100 out of 89,568

PanLingua

Sign up for the Rxivist weekly newsletter! (Click here for more details.)


News