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Author: Yoav Gilad

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    • genomics: 38,341 (rank: 174 out of 42,763)

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Preprints

Divergence in alternative polyadenylation contributes to gene regulatory differences between humans and chimpanzees

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Characterizing and inferring quantitative cell cycle phase in single-cell RNA-seq data analysis

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WASP: allele-specific software for robust discovery of molecular quantitative trait loci

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Impact of RNA degradation on measurements of gene expression

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Thousands of novel translated open reading frames in humans inferred by ribosome footprint profiling

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Batch effects and the effective design of single-cell gene expression studies

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Impact of regulatory variation across human iPSCs and differentiated cells

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Reducing mitochondrial reads in ATAC-seq using CRISPR/Cas9

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Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells

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Systematic Comparison of High-throughput Single-Cell and Single-Nucleus Transcriptomes during Cardiomyocyte Differentiation

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Methylation QTLs are associated with coordinated changes in transcription factor binding, histone modifications, and gene expression levels.

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msCentipede: Modeling heterogeneity across genomic sites improves accuracy in the inference of transcription factor binding

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Genetic Variation, Not Cell Type of Origin, Underlies Regulatory Differences in iPSCs

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Determining the genetic basis of anthracycline-cardiotoxicity by molecular response QTL mapping in induced cardiomyocytes

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Generation of a Panel of Induced Pluripotent Stem Cells From Chimpanzees: a Resource for Comparative Functional Genomics

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Reorganization of 3D Genome Structure May Contribute to Gene Regulatory Evolution in Primates

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A comparison of gene expression and DNA methylation patterns across tissues and species

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Mycobacterial infection induces a specific human innate immune response

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Discovery and characterization of variance QTLs in human induced pluripotent stem cells

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Widespread conservation of chromatin accessibility patterns and transcription factor binding in human and chimpanzee induced pluripotent stem cells

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Reprogramming LCLs to iPSCs Results in Recovery of Donor-Specific Gene Expression Signature

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A Comparative Study Of Endoderm Differentiation In Humans And Chimpanzees

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A Comparative Assessment of Human and Chimpanzee iPSC-derived Cardiomyocytes with Primary Heart Tissues

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Silencing Of Transposable Elements May Not Be A Major Driver Of Regulatory Evolution In Primate Induced Pluripotent Stem Cells

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Epigenetic Modifications are Associated with Inter-species Gene Expression Variation in Primates

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The Genetic Architecture of Gene Expression Levels in Wild Baboons

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Alternative polyadenylation mediates genetic regulation of gene expression

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Predicting susceptibility to tuberculosis based on gene expression profiling in dendritic cells

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Host genetic variation in mucosal immunity pathways influences the upper airway microbiome

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A Methodological Assessment and Characterization of Genetically-Driven Variation in Three Human Phosphoproteomes

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Inter-species differences in response to hypoxia in iPSC-derived cardiomyocytes from humans and chimpanzees

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Dynamic effects of genetic variation on gene expression revealed following hypoxic stress in cardiomyocytes

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Gene expression variability in human and chimpanzee populations share common determinants

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