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Author: Kerstin Howe

Rankings

  • All-time downloads: 108,613 (rank: 1,875 )
  • Categories:
    • bioinformatics: 11,407 (rank: 1,021 (tie) )
    • cancer biology: 261 (rank: 43,250 (tie) )
    • evolutionary biology: 1,166 (rank: 8,588 (tie) )
    • genomics: 89,672 (rank: 125 )

Downloads per author, site-wide

Preprints

The complete sequence of a human genome

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  • Downloaded 56,320 times
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    • Site-wide: 171
    • In genomics: 3
  • Year to date:
    • Site-wide: 115
  • Since beginning of last month:
    • Site-wide: 163

Telomere-to-telomere assembly of a complete human X chromosome

bioinformatics more details view paper
  • Downloaded 7,057 times
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    • Site-wide: 2,138
    • In bioinformatics: 115
  • Year to date:
    • Site-wide: 20,664
  • Since beginning of last month:
    • Site-wide: 32,091

Towards complete and error-free genome assemblies of all vertebrate species

genomics more details view paper
  • Downloaded 6,415 times
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    • Site-wide: 2,431
    • In genomics: 183
  • Year to date:
    • Site-wide: 16,003
  • Since beginning of last month:
    • Site-wide: 7,071

A Draft Human Pangenome Reference

genomics more details view paper
  • Downloaded 5,107 times
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    • Site-wide: 3,314
    • In genomics: 566
  • Year to date:
    • Site-wide: 315
  • Since beginning of last month:
    • Site-wide: 186

Identifying and removing haplotypic duplication in primary genome assemblies

bioinformatics more details view paper
  • Downloaded 3,371 times
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    • Site-wide: 5,996
    • In bioinformatics: 560
  • Year to date:
    • Site-wide: 11,876
  • Since beginning of last month:
    • Site-wide: 10,032

Automated assembly of high-quality diploid human reference genomes

genomics more details view paper
  • Downloaded 3,049 times
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    • Site-wide: 6,947
    • In genomics: 783
  • Year to date:
    • Site-wide: 631
  • Since beginning of last month:
    • Site-wide: 1,911

An improved pig reference genome sequence to enable pig genetics and genomics research

genomics more details view paper
  • Downloaded 2,065 times
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    • Site-wide: 12,388
    • In genomics: 1,151
  • Year to date:
    • Site-wide: 35,747
  • Since beginning of last month:
    • Site-wide: 28,200

Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies

genomics more details view paper
  • Downloaded 2,047 times
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    • Site-wide: 12,546
    • In genomics: 1,204
  • Year to date:
    • Site-wide: 6,509
  • Since beginning of last month:
    • Site-wide: 15,986

Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

genomics more details view paper
  • Downloaded 1,890 times
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    • Site-wide: 14,156
    • In genomics: 1,288
  • Year to date:
    • Site-wide: 50,939
  • Since beginning of last month:
    • Site-wide: 37,251

Multiple laboratory mouse reference genomes define strain specific haplotypes and novel functional loci

genomics more details view paper
  • Downloaded 1,772 times
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    • Site-wide: 15,648
    • In genomics: 1,428
  • Year to date:
    • Site-wide: 68,900
  • Since beginning of last month:
    • Site-wide: 37,341

The pig X and Y chromosomes: structure, sequence and evolution

genomics more details view paper
  • Downloaded 1,666 times
  • Download rankings, all-time:
    • Site-wide: 17,177
    • In genomics: 1,555
  • Year to date:
    • Site-wide: 100,012
  • Since beginning of last month:
    • Site-wide: 54,904

Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes

genomics more details view paper
  • Downloaded 1,315 times
  • Download rankings, all-time:
    • Site-wide: 25,014
    • In genomics: 2,125
  • Year to date:
    • Site-wide: 129,027
  • Since beginning of last month:
    • Site-wide: 91,053

Reference genome and demographic history of the most endangered marine mammal, the vaquita

genomics more details view paper
  • Downloaded 1,282 times
  • Download rankings, all-time:
    • Site-wide: 26,051
    • In genomics: 2,214
  • Year to date:
    • Site-wide: 96,427
  • Since beginning of last month:
    • Site-wide: 77,583

Complete vertebrate mitogenomes reveal widespread gene duplications and repeats

genomics more details view paper
  • Downloaded 1,198 times
  • Download rankings, all-time:
    • Site-wide: 28,993
    • In genomics: 2,463
  • Year to date:
    • Site-wide: 81,777
  • Since beginning of last month:
    • Site-wide: 33,583

The genome of C57BL/6J "Eve", the mother of the laboratory mouse genome reference strain

genomics more details view paper
  • Downloaded 1,155 times
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    • Site-wide: 30,681
    • In genomics: 2,483
  • Year to date:
    • Site-wide: 153,695
  • Since beginning of last month:
    • Site-wide: 186,467

CONSTRUCTION OF WHOLE GENOMES FROM SCAFFOLDS USING SINGLE CELL STRAND-SEQ DATA

genomics more details view paper
  • Downloaded 1,134 times
  • Download rankings, all-time:
    • Site-wide: 31,615
    • In genomics: 2,585
  • Year to date:
    • Site-wide: 122,877
  • Since beginning of last month:
    • Site-wide: 71,037

Differential sensory and immune gene evolution in sea turtles with contrasting demographic and life histories

genomics more details view paper
  • Downloaded 1,105 times
  • Download rankings, all-time:
    • Site-wide: 32,894
    • In genomics: 3,215
  • Year to date:
    • Site-wide: 2,908
  • Since beginning of last month:
    • Site-wide: 4,684

A high-quality, chromosome-level genome assembly of the Black Soldier Fly (Hermetia Illucens L.)

genomics more details view paper
  • Downloaded 957 times
  • Download rankings, all-time:
    • Site-wide: 41,059
    • In genomics: 3,192
  • Year to date:
    • Site-wide: 64,407
  • Since beginning of last month:
    • Site-wide: 75,462

Widespread false gene gains caused by duplication errors in genome assemblies

genomics more details view paper
  • Downloaded 852 times
  • Download rankings, all-time:
    • Site-wide: 48,946
    • In genomics: 3,781
  • Year to date:
    • Site-wide: 52,223
  • Since beginning of last month:
    • Site-wide: 84,529

Structure and evolutionary history of a large family of NLR proteins in the zebrafish

evolutionary biology more details view paper
  • Downloaded 838 times
  • Download rankings, all-time:
    • Site-wide: 50,211
    • In evolutionary biology: 2,012
  • Year to date:
    • Site-wide: 194,295
  • Since beginning of last month:
    • Site-wide: 198,364

Structure and evolutionary history of a large family of NLR proteins in the zebrafish

genomics more details view paper
  • Downloaded 745 times
  • Download rankings, all-time:
    • Site-wide: 59,643
    • In genomics: 4,125
  • Year to date:
    • Site-wide: 159,445
  • Since beginning of last month:
    • Site-wide: 172,639

Significantly improving the quality of genome assemblies through curation

bioinformatics more details view paper
  • Downloaded 700 times
  • Download rankings, all-time:
    • Site-wide: 65,332
    • In bioinformatics: 6,131
  • Year to date:
    • Site-wide: 120,849
  • Since beginning of last month:
    • Site-wide: 101,371

The Gene-Rich Genome of the Scallop Pecten maximus

genomics more details view paper
  • Downloaded 679 times
  • Download rankings, all-time:
    • Site-wide: 68,219
    • In genomics: 4,552
  • Year to date:
    • Site-wide: 163,864
  • Since beginning of last month:
    • Site-wide: 144,481

Pangenomics provides insights into the role of synanthropy in barn swallow evolution

genomics more details view paper
  • Downloaded 668 times
  • Download rankings, all-time:
    • Site-wide: 69,642
    • In genomics: 5,473
  • Year to date:
    • Site-wide: 6,587
  • Since beginning of last month:
    • Site-wide: 11,180

Genome sequence assembly evaluation using long-range sequencing data

bioinformatics more details view paper
  • Downloaded 648 times
  • Download rankings, all-time:
    • Site-wide: 72,745
    • In bioinformatics: 7,758
  • Year to date:
    • Site-wide: 6,941
  • Since beginning of last month:
    • Site-wide: 14,070

A haplotype-resolved genome assembly of the Nile rat facilitates exploration of the genetic basis of diabetes

genomics more details view paper
  • Downloaded 631 times
  • Download rankings, all-time:
    • Site-wide: 75,224
    • In genomics: 5,441
  • Year to date:
    • Site-wide: 17,715
  • Since beginning of last month:
    • Site-wide: 20,307

False gene and chromosome losses affected by assembly and sequence errors

genomics more details view paper
  • Downloaded 629 times
  • Download rankings, all-time:
    • Site-wide: 75,629
    • In genomics: 5,284
  • Year to date:
    • Site-wide: 41,608
  • Since beginning of last month:
    • Site-wide: 50,759

Genomics of cold adaptations in the Antarctic notothenioid fish radiation.

genomics more details view paper
  • Downloaded 611 times
  • Download rankings, all-time:
    • Site-wide: 78,320
    • In genomics: 6,376
  • Year to date:
    • Site-wide: 7,651
  • Since beginning of last month:
    • Site-wide: 9,054

gEVAL - A web based browser for evaluating genome assemblies

genomics more details view paper
  • Downloaded 530 times
  • Download rankings, all-time:
    • Site-wide: 93,382
    • In genomics: 5,608
  • Year to date:
    • Site-wide: 204,802
  • Since beginning of last month:
    • Site-wide: 197,750

The swan genome and transcriptome: its not all black and white

genomics more details view paper
  • Downloaded 487 times
  • Download rankings, all-time:
    • Site-wide: 102,995
    • In genomics: 6,404
  • Year to date:
    • Site-wide: 11,102
  • Since beginning of last month:
    • Site-wide: 27,394

A high-quality Genome and Comparison of Short versus Long Read Transcriptome of the Palaearctic duck Aythya fuligula (Tufted Duck)

genomics more details view paper
  • Downloaded 440 times
  • Download rankings, all-time:
    • Site-wide: 114,251
    • In genomics: 6,512
  • Year to date:
    • Site-wide: 87,450
  • Since beginning of last month:
    • Site-wide: 200,284

Recombination suppression and selection affect local ancestries in genomes of a migratory songbird

evolutionary biology more details view paper
  • Downloaded 420 times
  • Download rankings, all-time:
    • Site-wide: 119,446
    • In evolutionary biology: 6,197
  • Year to date:
    • Site-wide: 29,099
  • Since beginning of last month:
    • Site-wide: 19,277

The evolution of two transmissible cancers in Tasmanian devils

cancer biology more details view paper
  • Downloaded 378 times
  • Download rankings, all-time:
    • Site-wide: 131,189
    • In cancer biology: 4,816
  • Year to date:
    • Site-wide: 16,987
  • Since beginning of last month:
    • Site-wide: 18,884

Chromosome-level genome assembly of Acanthopagrus latus using PacBio and Hi-C technologies

genomics more details view paper
  • Downloaded 239 times
  • Download rankings, all-time:
    • Site-wide: 171,783
    • In genomics: 8,354
  • Year to date:
    • Site-wide: 144,195
  • Since beginning of last month:
    • Site-wide: 174,844

A Chromosome-level Genome Assembly of the Reed Warbler (Acrocephalus scirpaceus)

genomics more details view paper
  • Downloaded 213 times
  • Download rankings, all-time:
    • Site-wide: 178,525
    • In genomics: 8,472
  • Year to date:
    • Site-wide: 143,991
  • Since beginning of last month:
    • Site-wide: 136,163

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