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Author: Kerstin Howe

Rankings

  • All-time downloads: 76,873 (rank: 2,434 )
  • Categories:
    • bioinformatics: 10,193 (rank: 1,002 (tie) )
    • evolutionary biology: 788 (rank: 11,033 (tie) )
    • genomics: 65,892 (rank: 150 )

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Preprints

The complete sequence of a human genome

genomics more details view paper
  • Downloaded 41,986 times
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    • Site-wide: 187
    • In genomics: 6
  • Year to date:
    • Site-wide: 56
  • Since beginning of last month:
    • Site-wide: 100

Telomere-to-telomere assembly of a complete human X chromosome

bioinformatics more details view paper
  • Downloaded 6,707 times
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    • Site-wide: 1,788
    • In bioinformatics: 108
  • Year to date:
    • Site-wide: 14,721
  • Since beginning of last month:
    • Site-wide: 97,320

Towards complete and error-free genome assemblies of all vertebrate species

genomics more details view paper
  • Downloaded 5,984 times
  • Download rankings, all-time:
    • Site-wide: 2,091
    • In genomics: 169
  • Year to date:
    • Site-wide: 2,229
  • Since beginning of last month:
    • Site-wide: 22,078

Identifying and removing haplotypic duplication in primary genome assemblies

bioinformatics more details view paper
  • Downloaded 2,862 times
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    • Site-wide: 5,877
    • In bioinformatics: 573
  • Year to date:
    • Site-wide: 5,234
  • Since beginning of last month:
    • Site-wide: 11,871

An improved pig reference genome sequence to enable pig genetics and genomics research

genomics more details view paper
  • Downloaded 1,817 times
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    • Site-wide: 11,520
    • In genomics: 1,138
  • Year to date:
    • Site-wide: 40,598
  • Since beginning of last month:
    • Site-wide: 96,629

Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly

genomics more details view paper
  • Downloaded 1,686 times
  • Download rankings, all-time:
    • Site-wide: 12,883
    • In genomics: 1,283
  • Year to date:
    • Site-wide: 56,829
  • Since beginning of last month:
    • Site-wide: 124,923

Multiple laboratory mouse reference genomes define strain specific haplotypes and novel functional loci

genomics more details view paper
  • Downloaded 1,631 times
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    • Site-wide: 13,506
    • In genomics: 1,337
  • Year to date:
    • Site-wide: 62,194
  • Since beginning of last month:
    • Site-wide: 50,015

The pig X and Y chromosomes: structure, sequence and evolution

genomics more details view paper
  • Downloaded 1,571 times
  • Download rankings, all-time:
    • Site-wide: 14,319
    • In genomics: 1,414
  • Year to date:
    • Site-wide: 114,094
  • Since beginning of last month:
    • Site-wide: 135,665

Chasing perfection: validation and polishing strategies for telomere-to-telomere genome assemblies

genomics more details view paper
  • Downloaded 1,287 times
  • Download rankings, all-time:
    • Site-wide: 19,468
    • In genomics: 1,815
  • Year to date:
    • Site-wide: 3,683
  • Since beginning of last month:
    • Site-wide: 3,858

Repeat associated mechanisms of genome evolution and function revealed by the Mus caroli and Mus pahari genomes

genomics more details view paper
  • Downloaded 1,242 times
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    • Site-wide: 20,563
    • In genomics: 1,922
  • Year to date:
    • Site-wide: 121,725
  • Since beginning of last month:
    • Site-wide: 128,422

Reference genome and demographic history of the most endangered marine mammal, the vaquita

genomics more details view paper
  • Downloaded 1,168 times
  • Download rankings, all-time:
    • Site-wide: 22,569
    • In genomics: 2,091
  • Year to date:
    • Site-wide: 65,851
  • Since beginning of last month:
    • Site-wide: 132,728

The genome of C57BL/6J "Eve", the mother of the laboratory mouse genome reference strain

genomics more details view paper
  • Downloaded 1,097 times
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    • Site-wide: 24,839
    • In genomics: 2,269
  • Year to date:
    • Site-wide: 86,117
  • Since beginning of last month:
    • Site-wide: 135,050

Complete vertebrate mitogenomes reveal widespread gene duplications and repeats

genomics more details view paper
  • Downloaded 1,062 times
  • Download rankings, all-time:
    • Site-wide: 26,139
    • In genomics: 2,350
  • Year to date:
    • Site-wide: 14,631
  • Since beginning of last month:
    • Site-wide: 62,375

CONSTRUCTION OF WHOLE GENOMES FROM SCAFFOLDS USING SINGLE CELL STRAND-SEQ DATA

genomics more details view paper
  • Downloaded 1,053 times
  • Download rankings, all-time:
    • Site-wide: 26,461
    • In genomics: 2,373
  • Year to date:
    • Site-wide: 45,892
  • Since beginning of last month:
    • Site-wide: 146,654

A high-quality, chromosome-level genome assembly of the Black Soldier Fly (Hermetia Illucens L.)

genomics more details view paper
  • Downloaded 797 times
  • Download rankings, all-time:
    • Site-wide: 39,758
    • In genomics: 3,201
  • Year to date:
    • Site-wide: 19,461
  • Since beginning of last month:
    • Site-wide: 53,649

Structure and evolutionary history of a large family of NLR proteins in the zebrafish

evolutionary biology more details view paper
  • Downloaded 788 times
  • Download rankings, all-time:
    • Site-wide: 40,369
    • In evolutionary biology: 1,812
  • Year to date:
    • Site-wide: 143,331
  • Since beginning of last month:
    • Site-wide: 155,042

Structure and evolutionary history of a large family of NLR proteins in the zebrafish

genomics more details view paper
  • Downloaded 688 times
  • Download rankings, all-time:
    • Site-wide: 48,935
    • In genomics: 3,739
  • Year to date:
    • Site-wide: 154,480
  • Since beginning of last month:
    • Site-wide: 163,809

Widespread false gene gains caused by duplication errors in genome assemblies

genomics more details view paper
  • Downloaded 668 times
  • Download rankings, all-time:
    • Site-wide: 50,926
    • In genomics: 3,853
  • Year to date:
    • Site-wide: 10,143
  • Since beginning of last month:
    • Site-wide: 74,103

The Gene-Rich Genome of the Scallop Pecten maximus

genomics more details view paper
  • Downloaded 625 times
  • Download rankings, all-time:
    • Site-wide: 55,685
    • In genomics: 4,102
  • Year to date:
    • Site-wide: 127,777
  • Since beginning of last month:
    • Site-wide: 150,732

Significantly improving the quality of genome assemblies through curation

bioinformatics more details view paper
  • Downloaded 624 times
  • Download rankings, all-time:
    • Site-wide: 55,876
    • In bioinformatics: 5,540
  • Year to date:
    • Site-wide: 58,768
  • Since beginning of last month:
    • Site-wide: 88,322

gEVAL - A web based browser for evaluating genome assemblies

genomics more details view paper
  • Downloaded 498 times
  • Download rankings, all-time:
    • Site-wide: 73,440
    • In genomics: 4,976
  • Year to date:
    • Site-wide: 129,429
  • Since beginning of last month:
    • Site-wide: 71,310

False gene and chromosome losses affected by assembly and sequence errors

genomics more details view paper
  • Downloaded 401 times
  • Download rankings, all-time:
    • Site-wide: 91,963
    • In genomics: 5,763
  • Year to date:
    • Site-wide: 22,395
  • Since beginning of last month:
    • Site-wide: 49,235

A high-quality Genome and Comparison of Short versus Long Read Transcriptome of the Palaearctic duck Aythya fuligula (Tufted Duck)

genomics more details view paper
  • Downloaded 317 times
  • Download rankings, all-time:
    • Site-wide: 111,979
    • In genomics: 6,464
  • Year to date:
    • Site-wide: 31,722
  • Since beginning of last month:
    • Site-wide: 35,480

Chromosome-level genome assembly of Acanthopagrus latus using PacBio and Hi-C technologies

genomics more details view paper
  • Downloaded 171 times
  • Download rankings, all-time:
    • Site-wide: 148,898
    • In genomics: 7,599
  • Year to date:
    • Site-wide: 69,898
  • Since beginning of last month:
    • Site-wide: 101,090

A Chromosome-level Genome Assembly of the Reed Warbler (Acrocephalus scirpaceus)

genomics more details view paper
  • Downloaded 143 times
  • Download rankings, all-time:
    • Site-wide: 154,168
    • In genomics: 7,733
  • Year to date:
    • Site-wide: 83,859
  • Since beginning of last month:
    • Site-wide: 133,125

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