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Author: Florian Markowetz

Rankings

  • All-time downloads: 35,096 (rank: 3,405 out of 513,246)
  • Categories:
    • bioengineering: 415 (rank: 6,766 (tie) out of 13,788)
    • bioinformatics: 3,338 (rank: 3,424 out of 37,058)
    • cancer biology: 27,285 (rank: 21 out of 31,622)
    • gastroenterology: 338 (rank: 721 (tie) out of 1,247)
    • genomics: 2,518 (rank: 8,421 out of 45,811)
    • neuroscience: 1,202 (rank: 16,163 (tie) out of 73,732)

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Preprints

The evolutionary history of 2,658 cancers

cancer biology more details view paper
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    • In cancer biology: 8 out of 3,768
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    • Site-wide: 5,126 out of 119,012
  • Since beginning of last month:
    • Site-wide: 33,335 out of 119,012

Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes

cancer biology more details view paper
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    • Site-wide: 1,479 out of 119,012
    • In cancer biology: 22 out of 3,768
  • Year to date:
    • Site-wide: 4,449 out of 119,012
  • Since beginning of last month:
    • Site-wide: 7,837 out of 119,012

Copy-number signatures and mutational processes in ovarian carcinoma

cancer biology more details view paper
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    • Site-wide: 2,886 out of 119,012
    • In cancer biology: 47 out of 3,768
  • Year to date:
    • Site-wide: 26,250 out of 119,012
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    • Site-wide: 26,241 out of 119,012

Neutral tumor evolution?

cancer biology more details view paper
  • Downloaded 2,031 times
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    • Site-wide: 5,927 out of 119,012
    • In cancer biology: 94 out of 3,768
  • Year to date:
    • Site-wide: 81,691 out of 119,012
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    • Site-wide: 78,871 out of 119,012

Novel Quantitative ChIP-seq Methods Measure Absolute Fold-Change in ER Binding Upon Fulvestrant Treatment

genomics more details view paper
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    • Site-wide: 5,972 out of 119,012
    • In genomics: 727 out of 6,455
  • Year to date:
    • Site-wide: 29,977 out of 119,012
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    • Site-wide: 39,009 out of 119,012

SVclone: inferring structural variant cancer cell fraction

cancer biology more details view paper
  • Downloaded 1,773 times
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    • Site-wide: 7,246 out of 119,012
    • In cancer biology: 128 out of 3,768
  • Year to date:
    • Site-wide: 48,947 out of 119,012
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    • Site-wide: 53,087 out of 119,012

Immuno-phenotypes of Pancreatic Ductal Adenocarcinoma: Metaanalysis of transcriptional subtypes

cancer biology more details view paper
  • Downloaded 1,317 times
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    • Site-wide: 11,385 out of 119,012
    • In cancer biology: 243 out of 3,768
  • Year to date:
    • Site-wide: 58,026 out of 119,012
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    • Site-wide: 47,318 out of 119,012

Ccube: A fast and robust method for estimating cancer cell fractions

bioinformatics more details view paper
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    • Site-wide: 12,790 out of 119,012
    • In bioinformatics: 1,654 out of 9,624
  • Year to date:
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  • Since beginning of last month:
    • Site-wide: 10,833 out of 119,012

VULCAN integrates ChIP-seq with patient-derived co-expression networks to identify GRHL2 as a key co-regulator of ERa at enhancers in breast cancer

cancer biology more details view paper
  • Downloaded 1,205 times
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    • Site-wide: 13,006 out of 119,012
    • In cancer biology: 285 out of 3,768
  • Year to date:
    • Site-wide: 30,416 out of 119,012
  • Since beginning of last month:
    • Site-wide: 31,968 out of 119,012

Intra-tumor heterogeneity defines treatment-resistant HER2+ breast tumors

cancer biology more details view paper
  • Downloaded 969 times
  • Download rankings, all-time:
    • Site-wide: 18,012 out of 119,012
    • In cancer biology: 433 out of 3,768
  • Year to date:
    • Site-wide: 24,733 out of 119,012
  • Since beginning of last month:
    • Site-wide: 47,120 out of 119,012

The small molecule KHS101 induces bioenergetic dysfunction in glioblastoma cells through inhibition of mitochondrial HSPD1

cancer biology more details view paper
  • Downloaded 836 times
  • Download rankings, all-time:
    • Site-wide: 22,280 out of 119,012
    • In cancer biology: 564 out of 3,768
  • Year to date:
    • Site-wide: 60,644 out of 119,012
  • Since beginning of last month:
    • Site-wide: 31,963 out of 119,012

Causal Modeling Dissects Tumour–Microenvironment Interactions In Breast Cancer

bioinformatics more details view paper
  • Downloaded 729 times
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    • Site-wide: 27,013 out of 119,012
    • In bioinformatics: 3,217 out of 9,624
  • Year to date:
    • Site-wide: 81,693 out of 119,012
  • Since beginning of last month:
    • Site-wide: 49,100 out of 119,012

Low Perfusion Compartments in Glioblastoma Quantified by Advanced Magnetic Resonance Imaging and Correlated with Patient Survival

neuroscience more details view paper
  • Downloaded 729 times
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    • Site-wide: 27,007 out of 119,012
    • In neuroscience: 3,762 out of 18,703
  • Year to date:
    • Site-wide: 43,432 out of 119,012
  • Since beginning of last month:
    • Site-wide: 37,583 out of 119,012

Allele-specific multi-sample copy number segmentation

bioinformatics more details view paper
  • Downloaded 698 times
  • Download rankings, all-time:
    • Site-wide: 28,706 out of 119,012
    • In bioinformatics: 3,396 out of 9,624
  • Year to date:
    • Site-wide: 47,271 out of 119,012
  • Since beginning of last month:
    • Site-wide: 49,259 out of 119,012

Estimating cellular pathways from an ensemble of heterogeneous data sources

genomics more details view paper
  • Downloaded 498 times
  • Download rankings, all-time:
    • Site-wide: 43,927 out of 119,012
    • In genomics: 3,646 out of 6,455
  • Year to date:
    • Site-wide: 105,720 out of 119,012
  • Since beginning of last month:
    • Site-wide: 86,544 out of 119,012

BaalChIP: Bayesian analysis of allele-specific transcription factor binding in cancer genomes

cancer biology more details view paper
  • Downloaded 492 times
  • Download rankings, all-time:
    • Site-wide: 44,583 out of 119,012
    • In cancer biology: 1,251 out of 3,768
  • Year to date:
    • Site-wide: 87,792 out of 119,012
  • Since beginning of last month:
    • Site-wide: 78,966 out of 119,012

Intratumoral Heterogeneity of Tumor Infiltration of Glioblastoma Revealed by Joint Histogram Analysis of Diffusion Tensor Imaging

neuroscience more details view paper
  • Downloaded 473 times
  • Download rankings, all-time:
    • Site-wide: 46,645 out of 119,012
    • In neuroscience: 7,015 out of 18,703
  • Year to date:
    • Site-wide: 82,118 out of 119,012
  • Since beginning of last month:
    • Site-wide: 84,056 out of 119,012

Genome-wide Estrogen Receptor-alpha activation is sustained, not cyclical

cancer biology more details view paper
  • Downloaded 453 times
  • Download rankings, all-time:
    • Site-wide: 48,840 out of 119,012
    • In cancer biology: 1,372 out of 3,768
  • Year to date:
    • Site-wide: 86,178 out of 119,012
  • Since beginning of last month:
    • Site-wide: 69,766 out of 119,012

3D-printed moulds for image-guided surgical biopsies: an open source computational platform

bioengineering more details view paper
  • Downloaded 415 times
  • Download rankings, all-time:
    • Site-wide: 53,683 out of 119,012
    • In bioengineering: 966 out of 2,460
  • Year to date:
    • Site-wide: 37,279 out of 119,012
  • Since beginning of last month:
    • Site-wide: 33,998 out of 119,012

frenchFISH: Poisson models for quantifying DNA copy-number from fluorescence in situ hybridisation of tissue sections

bioinformatics more details view paper
  • Downloaded 412 times
  • Download rankings, all-time:
    • Site-wide: 54,058 out of 119,012
    • In bioinformatics: 5,572 out of 9,624
  • Year to date:
    • Site-wide: 57,001 out of 119,012
  • Since beginning of last month:
    • Site-wide: 68,260 out of 119,012

Triage-driven diagnosis for early detection of esophageal cancer using deep learning

gastroenterology more details view paper
  • Downloaded 338 times
  • Download rankings, all-time:
    • Site-wide: 65,118 out of 119,012
    • In gastroenterology: 55 out of 130
  • Year to date:
    • Site-wide: 23,131 out of 119,012
  • Since beginning of last month:
    • Site-wide: 18,947 out of 119,012

Multi-Parametric and Multi-Regional Histogram Analysis of MRI: Revealing Imaging Phenotypes of Glioblastoma Correlated with Patient Survival

bioinformatics more details view paper
  • Downloaded 281 times
  • Download rankings, all-time:
    • Site-wide: 75,306 out of 119,012
    • In bioinformatics: 7,037 out of 9,624
  • Year to date:
    • Site-wide: 91,295 out of 119,012
  • Since beginning of last month:
    • Site-wide: 63,004 out of 119,012

ZMIZ1 - A novel Estrogen Receptor co-activator that enhances the growth of ER+ breast cancer

cancer biology more details view paper
  • Downloaded 216 times
  • Download rankings, all-time:
    • Site-wide: 88,170 out of 119,012
    • In cancer biology: 2,676 out of 3,768
  • Year to date:
    • Site-wide: 65,917 out of 119,012
  • Since beginning of last month:
    • Site-wide: 107,732 out of 119,012

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