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Author: Harm van Bakel

Rankings

  • All-time downloads: 53,436 (rank: 2,978 )
  • Categories:
    • bioinformatics: 1,042 (rank: 15,046 (tie) )
    • developmental biology: 166 (rank: 19,429 (tie) )
    • epidemiology: 9,062 (rank: 1,593 )
    • gastroenterology: 1,458 (rank: 119 (tie) )
    • genetic and genomic medicine: 431 (rank: 6,458 (tie) )
    • genomics: 1,562 (rank: 15,850 (tie) )
    • hematology: 3,269 (rank: 46 (tie) )
    • infectious diseases: 33,297 (rank: 1,562 )
    • microbiology: 3,149 (rank: 4,847 (tie) )

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Preprints

Reduced neutralizing activity of post-SARS-CoV-2 vaccination serum against variants B.1.617.2, B.1.351, B.1.1.7+E484K and a sub-variant of C.37

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Introductions and early spread of SARS-CoV-2 in the New York City area

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    • Site-wide: 516
    • In infectious diseases: 182
  • Year to date:
    • Site-wide: 3,294
  • Since beginning of last month:
    • Site-wide: 4,505

Before the Surge: Molecular Evidence of SARS-CoV-2 in New York City Prior to the First Report

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  • Downloaded 9,558 times
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    • Site-wide: 973
    • In infectious diseases: 301
  • Year to date:
    • Site-wide: 178
  • Since beginning of last month:
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Seroconversion of a city: Longitudinal monitoring of SARS-CoV-2 seroprevalence in New York City

epidemiology more details view paper
  • Downloaded 8,643 times
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    • Site-wide: 1,097
    • In epidemiology: 139
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The plasmablast response to SARS-CoV-2 mRNA vaccination is dominated by non-neutralizing antibodies that target both the NTD and the RBD

infectious diseases more details view paper
  • Downloaded 4,125 times
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    • Site-wide: 3,004
    • In infectious diseases: 640
  • Year to date:
    • Site-wide: 450
  • Since beginning of last month:
    • Site-wide: 689

Fatal breakthrough infection after anti-BCMA CAR-T therapy highlights suboptimal immune response to SARS-CoV-2 vaccination in myeloma patients

hematology more details view paper
  • Downloaded 3,269 times
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    • Site-wide: 4,181
    • In hematology: 5
  • Year to date:
    • Site-wide: 583
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    • Site-wide: 1,697

Gastrointestinal involvement attenuates COVID-19 severity and mortality

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  • Downloaded 1,987 times
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    • Site-wide: 8,609
    • In infectious diseases: 1,221
  • Year to date:
    • Site-wide: 6,245
  • Since beginning of last month:
    • Site-wide: 11,749

Epigenomic and functional characterization of a core DNA methyltransferase in the human pathogen Clostridium difficile

genomics more details view paper
  • Downloaded 1,562 times
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    • Site-wide: 12,261
    • In genomics: 1,272
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    • Site-wide: 39,867
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    • Site-wide: 36,204

Limited intestinal inflammation despite diarrhea, fecal viral RNA and SARS-CoV-2-specific IgA in patients with acute COVID-19

gastroenterology more details view paper
  • Downloaded 1,458 times
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    • Site-wide: 13,586
    • In gastroenterology: 9
  • Year to date:
    • Site-wide: 7,673
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    • Site-wide: 12,003

Discovery Of UFO Proteins: Human-Virus Chimeric Proteins Generated During Influenza Virus Infection

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    • Site-wide: 14,111
    • In microbiology: 818
  • Year to date:
    • Site-wide: 54,252
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    • Site-wide: 45,245

Chromatiblock: scalable whole-genome visualization of structural differences in prokaryotes

bioinformatics more details view paper
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    • Site-wide: 22,459
    • In bioinformatics: 2,594
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    • Site-wide: 22,226
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    • Site-wide: 45,728

The arrival and spread of SARS-CoV2 in Colombia

infectious diseases more details view paper
  • Downloaded 924 times
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    • Site-wide: 26,728
    • In infectious diseases: 2,150
  • Year to date:
    • Site-wide: 14,556
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    • Site-wide: 13,839

Complete genome screening of clinical MRSA isolates identifies lineage diversity and provides full resolution of transmission and outbreak events

microbiology more details view paper
  • Downloaded 827 times
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    • Site-wide: 31,175
    • In microbiology: 1,848
  • Year to date:
    • Site-wide: 69,219
  • Since beginning of last month:
    • Site-wide: 69,361

Real Time Investigation of a large Nosocomial Influenza A Outbreak Informed by Genomic Epidemiology

infectious diseases more details view paper
  • Downloaded 673 times
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    • Site-wide: 41,400
    • In infectious diseases: 2,710
  • Year to date:
    • Site-wide: 61,508
  • Since beginning of last month:
    • Site-wide: 76,209

Avian influenza viruses in wild birds: virus evolution in a multi-host ecosystem

microbiology more details view paper
  • Downloaded 540 times
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    • Site-wide: 54,401
    • In microbiology: 3,456
  • Year to date:
    • Site-wide: 120,936
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    • Site-wide: 103,797

PathoSPOT genomic surveillance reveals under the radar outbreaks of methicillin resistant S. aureus bloodstream infections

infectious diseases more details view paper
  • Downloaded 474 times
  • Download rankings, all-time:
    • Site-wide: 63,040
    • In infectious diseases: 3,314
  • Year to date:
    • Site-wide: 79,427
  • Since beginning of last month:
    • Site-wide: 63,651

SARS-CoV-2 spread across the Colombian-Venezuelan border

genetic and genomic medicine more details view paper
  • Downloaded 431 times
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    • Site-wide: 69,769
    • In genetic and genomic medicine: 275
  • Year to date:
    • Site-wide: 66,497
  • Since beginning of last month:
    • Site-wide: 70,814

Blurred molecular epidemiological lines between the two dominant methicillin-resistant Staphylococcus aureus clones

epidemiology more details view paper
  • Downloaded 419 times
  • Download rankings, all-time:
    • Site-wide: 71,755
    • In epidemiology: 3,093
  • Year to date:
    • Site-wide: 89,646
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    • Site-wide: 125,941

A household case evidences shorter shedding of SARS-CoV-2 in naturally infected cats compared to their human owners.

infectious diseases more details view paper
  • Downloaded 381 times
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    • Site-wide: 78,544
    • In infectious diseases: 3,683
  • Year to date:
    • Site-wide: 44,206
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    • Site-wide: 44,566

Novel epitopes of human monoclonal antibodies targeting the influenza virus N1 neuraminidase

microbiology more details view paper
  • Downloaded 195 times
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    • Site-wide: 120,465
    • In microbiology: 8,958
  • Year to date:
    • Site-wide: 27,614
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    • Site-wide: 61,048

Single-cell analysis identifies a key role for Hhip in murine coronal suture development

developmental biology more details view paper
  • Downloaded 166 times
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    • Site-wide: 127,183
    • In developmental biology: 3,416
  • Year to date:
    • Site-wide: 33,360
  • Since beginning of last month:
    • Site-wide: 66,938

Respiratory tract explant infection dynamics of influenza A virus in California sea lions, northern elephant seals, and rhesus macaques

microbiology more details view paper
  • Downloaded 164 times
  • Download rankings, all-time:
    • Site-wide: 127,657
    • In microbiology: 9,606
  • Year to date:
    • Site-wide: 67,310
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    • Site-wide: 91,647

Modified Oxacillin Resistant Staphylococcus aureus detected in neonatal intensive care patients

infectious diseases more details view paper
  • Downloaded 107 times
  • Download rankings, all-time:
    • Site-wide: 139,791
    • In infectious diseases: 5,361
  • Year to date:
    • Site-wide: 53,268
  • Since beginning of last month:
    • Site-wide: 37,572

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