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Author: Kasper D. Hansen

Rankings

  • All-time downloads: 36,900 (rank: 1,128 out of 398,022)
  • Categories:
    • bioinformatics: 12,722 (rank: 384 out of 33,943)
    • evolutionary biology: 260 (rank: 16,063 (tie) out of 20,386)
    • genetics: 1,905 (rank: 7,891 (tie) out of 36,547)
    • genomics: 17,824 (rank: 511 out of 42,257)
    • molecular biology: 513 (rank: 8,204 (tie) out of 21,184)
    • neuroscience: 3,676 (rank: 3,826 (tie) out of 66,579)

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Preprints

Preprocessing, normalization and integration of the Illumina HumanMethylationEPIC array

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recount: A large-scale resource of analysis-ready RNA-seq expression data

genomics more details view paper
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Functional normalization of 450k methylation array data improves replication in large cancer studies

bioinformatics more details view paper
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Reconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data

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Human splicing diversity across the Sequence Read Archive

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Neuronal brain region-specific DNA methylation and chromatin accessibility are associated with neuropsychiatric disease heritability

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Analyzing whole genome bisulfite sequencing data from highly divergent genotypes

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Bacterial Infection Remodels the DNA Methylation Landscape of Human Dendritic Cells

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Precocious neuronal differentiation and disrupted oxygen responses in Kabuki syndrome

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Common DNA sequence variation influences 3-dimensional conformation of the human genome

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Software For The Integration Of Multi-Omics Experiments In Bioconductor

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Linear models enable powerful differential activity analysis in massively parallel reporter assays

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Removing unwanted variation between samples in Hi-C experiments

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Rail-dbGaP: analyzing dbGaP-protected data in the cloud with Amazon Elastic MapReduce

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Correcting For Cell-Type Heterogeneity In Epigenome-Wide Association Studies: Premature Analyses And Conclusions

bioinformatics more details view paper
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Whole genome analysis of the methylome and hydroxymethylome in normal and malignant lung and liver

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Co-expression analysis is biased by a mean-correlation relationship

genomics more details view paper
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Promoter CpG density predicts downstream gene loss-of-function intolerance

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Co-expression patterns define epigenetic regulators associated with neurological dysfunction

genomics more details view paper
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A screen of 1,049 schizophrenia and 30 Alzheimer’s-associated variants for regulatory potential

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'Gap hunting' to characterize clustered probe signals in Illumina methylation array data

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Precocious Chondrocyte Differentiation Disrupts Skeletal Growth in Kabuki Syndrome Mice

genetics more details view paper
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Transient Reduction of DNA Methylation at the Onset of Meiosis in Male Mice

molecular biology more details view paper
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Purifying selection acts on germline methylation to modify the CpG mutation rate at promoters

evolutionary biology more details view paper
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