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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 42,904 bioRxiv papers from 193,370 authors.

Author: Thierry Mora

  • Most recently observed institution: Ecole normale superieure

Rankings

  • All-time downloads: 10,914 (rank: 2,068 (tie) out of 193,370)
  • Categories:
    • bioinformatics: 542 (rank: 8,881 (tie) out of 18,392)
    • biophysics: 1,754 (rank: 370 out of 7,174)
    • cell biology: 87 (rank: 10,873 (tie) out of 11,894)
    • evolutionary biology: 223 (rank: 8,579 (tie) out of 11,775)
    • immunology: 6,092 (rank: 51 out of 7,090)
    • microbiology: 330 (rank: 6,975 (tie) out of 18,451)
    • neuroscience: 1,574 (rank: 3,369 (tie) out of 30,069)
    • systems biology: 312 (rank: 3,496 (tie) out of 6,068)

Downloads per author, site-wide

Preprints

Measuring the sequence-affinity landscape of antibodies with massively parallel titration curves

biophysics more details view paper
  • Downloaded 920 times
  • Download rankings, all-time:
    • Site-wide: 5,054 out of 42,904
    • In biophysics: 132 out of 1,765
  • Year to date:
    • Site-wide: 19,420 out of 42,904
  • Since beginning of last month:
    • Site-wide: 19,420 out of 42,904

Quantifying lymphocyte receptor diversity

immunology more details view paper
  • Downloaded 718 times
  • Download rankings, all-time:
    • Site-wide: 7,298 out of 42,904
    • In immunology: 70 out of 909
  • Year to date:
    • Site-wide: 12,238 out of 42,904
  • Since beginning of last month:
    • Site-wide: 12,238 out of 42,904

Asymmetric adhesion of rod-shaped bacteria controls microcolony morphogenesis

biophysics more details view paper
  • Downloaded 682 times
  • Download rankings, all-time:
    • Site-wide: 7,879 out of 42,904
    • In biophysics: 216 out of 1,765
  • Year to date:
    • Site-wide: 24,636 out of 42,904
  • Since beginning of last month:
    • Site-wide: 24,636 out of 42,904

Detecting T-cell receptors involved in immune responses from single repertoire snapshots

immunology more details view paper
  • Downloaded 632 times
  • Download rankings, all-time:
    • Site-wide: 8,732 out of 42,904
    • In immunology: 94 out of 909
  • Year to date:
    • Site-wide: 3,392 out of 42,904
  • Since beginning of last month:
    • Site-wide: 3,392 out of 42,904

IGoR: A Tool For High-Throughput Immune Repertoire Analysis

immunology more details view paper
  • Downloaded 601 times
  • Download rankings, all-time:
    • Site-wide: 9,355 out of 42,904
    • In immunology: 104 out of 909
  • Year to date:
    • Site-wide: 16,347 out of 42,904
  • Since beginning of last month:
    • Site-wide: 16,347 out of 42,904

Quantifying selection in immune receptor repertoires

immunology more details view paper
  • Downloaded 520 times
  • Download rankings, all-time:
    • Site-wide: 11,256 out of 42,904
    • In immunology: 137 out of 909
  • Year to date:
    • Site-wide: None out of 42,904
  • Since beginning of last month:
    • Site-wide: None out of 42,904

Inferring processes underlying B-cell repertoire diversity.

immunology more details view paper
  • Downloaded 447 times
  • Download rankings, all-time:
    • Site-wide: 13,477 out of 42,904
    • In immunology: 174 out of 909
  • Year to date:
    • Site-wide: 13,249 out of 42,904
  • Since beginning of last month:
    • Site-wide: 13,249 out of 42,904

Disorder and the neural representation of complex odors: smelling in the real world

neuroscience more details view paper
  • Downloaded 428 times
  • Download rankings, all-time:
    • Site-wide: 14,192 out of 42,904
    • In neuroscience: 2,240 out of 7,432
  • Year to date:
    • Site-wide: 28,342 out of 42,904
  • Since beginning of last month:
    • Site-wide: 28,342 out of 42,904

Clonal competition in B-cell repertoires during chronic HIV-1 infection

immunology more details view paper
  • Downloaded 427 times
  • Download rankings, all-time:
    • Site-wide: 14,233 out of 42,904
    • In immunology: 186 out of 909
  • Year to date:
    • Site-wide: 18,186 out of 42,904
  • Since beginning of last month:
    • Site-wide: 18,186 out of 42,904

Fluctuating fitness shapes the clone size distribution of immune repertoires

immunology more details view paper
  • Downloaded 408 times
  • Download rankings, all-time:
    • Site-wide: 14,948 out of 42,904
    • In immunology: 194 out of 909
  • Year to date:
    • Site-wide: 32,439 out of 42,904
  • Since beginning of last month:
    • Site-wide: 32,439 out of 42,904

Persisting fetal clonotypes influence the structure and overlap of adult human T cell receptor repertoires

immunology more details view paper
  • Downloaded 332 times
  • Download rankings, all-time:
    • Site-wide: 18,231 out of 42,904
    • In immunology: 249 out of 909
  • Year to date:
    • Site-wide: 33,184 out of 42,904
  • Since beginning of last month:
    • Site-wide: 33,184 out of 42,904

Habitat Fluctuations Drive Species Covariation in the Human Microbiota

microbiology more details view paper
  • Downloaded 330 times
  • Download rankings, all-time:
    • Site-wide: 18,309 out of 42,904
    • In microbiology: 977 out of 3,243
  • Year to date:
    • Site-wide: 35,968 out of 42,904
  • Since beginning of last month:
    • Site-wide: 35,968 out of 42,904

Closed-loop estimation of retinal network sensitivity reveals signature of efficient coding

neuroscience more details view paper
  • Downloaded 328 times
  • Download rankings, all-time:
    • Site-wide: 18,383 out of 42,904
    • In neuroscience: 2,991 out of 7,432
  • Year to date:
    • Site-wide: 24,656 out of 42,904
  • Since beginning of last month:
    • Site-wide: 24,656 out of 42,904

Active degradation of a regulator controls coordination of downstream genes

systems biology more details view paper
  • Downloaded 312 times
  • Download rankings, all-time:
    • Site-wide: 19,229 out of 42,904
    • In systems biology: 623 out of 1,303
  • Year to date:
    • Site-wide: 20,483 out of 42,904
  • Since beginning of last month:
    • Site-wide: 20,483 out of 42,904

Predicting the spectrum of TCR repertoire sharing with a data-driven model of recombination

immunology more details view paper
  • Downloaded 305 times
  • Download rankings, all-time:
    • Site-wide: 19,593 out of 42,904
    • In immunology: 287 out of 909
  • Year to date:
    • Site-wide: 13,990 out of 42,904
  • Since beginning of last month:
    • Site-wide: 13,990 out of 42,904

repgenHMM: a dynamic programming tool to infer the rules of immune receptor generation from sequence data

bioinformatics more details view paper
  • Downloaded 291 times
  • Download rankings, all-time:
    • Site-wide: 20,408 out of 42,904
    • In bioinformatics: 2,946 out of 4,686
  • Year to date:
    • Site-wide: 30,400 out of 42,904
  • Since beginning of last month:
    • Site-wide: 30,400 out of 42,904

Population dynamics of immune repertoires

immunology more details view paper
  • Downloaded 290 times
  • Download rankings, all-time:
    • Site-wide: 20,446 out of 42,904
    • In immunology: 309 out of 909
  • Year to date:
    • Site-wide: 31,735 out of 42,904
  • Since beginning of last month:
    • Site-wide: 31,735 out of 42,904

Separating intrinsic interactions from extrinsic correlations in a network of sensory neurons

neuroscience more details view paper
  • Downloaded 271 times
  • Download rankings, all-time:
    • Site-wide: 21,625 out of 42,904
    • In neuroscience: 3,577 out of 7,432
  • Year to date:
    • Site-wide: 26,422 out of 42,904
  • Since beginning of last month:
    • Site-wide: 26,422 out of 42,904

Random versus maximum entropy models of neural population activity

neuroscience more details view paper
  • Downloaded 270 times
  • Download rankings, all-time:
    • Site-wide: 21,708 out of 42,904
    • In neuroscience: 3,579 out of 7,432
  • Year to date:
    • Site-wide: 38,010 out of 42,904
  • Since beginning of last month:
    • Site-wide: 38,010 out of 42,904

Mouse T cell repertoires as statistical ensembles: overall characterization and age dependence

immunology more details view paper
  • Downloaded 261 times
  • Download rankings, all-time:
    • Site-wide: 22,298 out of 42,904
    • In immunology: 345 out of 909
  • Year to date:
    • Site-wide: 36,476 out of 42,904
  • Since beginning of last month:
    • Site-wide: 36,476 out of 42,904

A qualitative model for the integration of conflicting exogenous and endogenous signals by dendritic cells

immunology more details view paper
  • Downloaded 254 times
  • Download rankings, all-time:
    • Site-wide: 22,791 out of 42,904
    • In immunology: 354 out of 909
  • Year to date:
    • Site-wide: 30,862 out of 42,904
  • Since beginning of last month:
    • Site-wide: 30,862 out of 42,904

OLGA: fast computation of generation probabilities of B- and T-cell receptor amino acid sequences and motifs

bioinformatics more details view paper
  • Downloaded 251 times
  • Download rankings, all-time:
    • Site-wide: 22,966 out of 42,904
    • In bioinformatics: 3,174 out of 4,686
  • Year to date:
    • Site-wide: 12,454 out of 42,904
  • Since beginning of last month:
    • Site-wide: 12,454 out of 42,904

Method for identification of condition-associated public antigen receptor sequences

immunology more details view paper
  • Downloaded 237 times
  • Download rankings, all-time:
    • Site-wide: 24,016 out of 42,904
    • In immunology: 376 out of 909
  • Year to date:
    • Site-wide: 27,647 out of 42,904
  • Since beginning of last month:
    • Site-wide: 27,647 out of 42,904

Genesis of the αβ T-cell receptor

immunology more details view paper
  • Downloaded 228 times
  • Download rankings, all-time:
    • Site-wide: 24,577 out of 42,904
    • In immunology: 392 out of 909
  • Year to date:
    • Site-wide: 9,967 out of 42,904
  • Since beginning of last month:
    • Site-wide: 9,967 out of 42,904

Diversity of immune strategies explained by adaptation to pathogen statistics

evolutionary biology more details view paper
  • Downloaded 223 times
  • Download rankings, all-time:
    • Site-wide: 24,975 out of 42,904
    • In evolutionary biology: 2,123 out of 3,202
  • Year to date:
    • Site-wide: 37,780 out of 42,904
  • Since beginning of last month:
    • Site-wide: 37,780 out of 42,904

How a well-adapting immune system remembers

immunology more details view paper
  • Downloaded 222 times
  • Download rankings, all-time:
    • Site-wide: 25,076 out of 42,904
    • In immunology: 410 out of 909
  • Year to date:
    • Site-wide: 21,247 out of 42,904
  • Since beginning of last month:
    • Site-wide: 21,247 out of 42,904

Precise tracking of vaccine-responding T-cell clones reveals convergent and personalized response in identical twins

immunology more details view paper
  • Downloaded 210 times
  • Download rankings, all-time:
    • Site-wide: 25,980 out of 42,904
    • In immunology: 425 out of 909
  • Year to date:
    • Site-wide: 26,234 out of 42,904
  • Since beginning of last month:
    • Site-wide: 26,234 out of 42,904

Physical epistatic landscape of antibody binding affinity

biophysics more details view paper
  • Downloaded 152 times
  • Download rankings, all-time:
    • Site-wide: 30,880 out of 42,904
    • In biophysics: 1,272 out of 1,765
  • Year to date:
    • Site-wide: 26,261 out of 42,904
  • Since beginning of last month:
    • Site-wide: 26,261 out of 42,904

A simple model for low variability in neural spike trains

neuroscience more details view paper
  • Downloaded 143 times
  • Download rankings, all-time:
    • Site-wide: 31,638 out of 42,904
    • In neuroscience: 5,336 out of 7,432
  • Year to date:
    • Site-wide: 25,468 out of 42,904
  • Since beginning of last month:
    • Site-wide: 25,468 out of 42,904

Blindfold learning of an accurate neural metric

neuroscience more details view paper
  • Downloaded 134 times
  • Download rankings, all-time:
    • Site-wide: 32,536 out of 42,904
    • In neuroscience: 5,507 out of 7,432
  • Year to date:
    • Site-wide: None out of 42,904
  • Since beginning of last month:
    • Site-wide: None out of 42,904

Receptor crosstalk improves concentration sensing of multiple ligands

cell biology more details view paper
  • Downloaded 87 times
  • Download rankings, all-time:
    • Site-wide: 37,276 out of 42,904
    • In cell biology: 1,716 out of 1,952
  • Year to date:
    • Site-wide: 32,456 out of 42,904
  • Since beginning of last month:
    • Site-wide: 32,456 out of 42,904

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