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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 48,092 bioRxiv papers from 215,637 authors.

Author: Thierry Mora

  • Most recently observed institution: Ecole normale superieure

Rankings

  • All-time downloads: 11,691 (rank: 2,073 out of 215,637)
  • Categories:
    • bioinformatics: 607 (rank: 8,964 (tie) out of 19,497)
    • biophysics: 1,837 (rank: 438 out of 7,841)
    • cell biology: 104 (rank: 11,847 (tie) out of 13,160)
    • evolutionary biology: 232 (rank: 9,343 (tie) out of 12,558)
    • immunology: 6,564 (rank: 51 out of 8,212)
    • microbiology: 339 (rank: 8,006 (tie) out of 20,534)
    • neuroscience: 1,682 (rank: 3,683 (tie) out of 33,352)
    • systems biology: 326 (rank: 3,824 (tie) out of 6,567)

Downloads per author, site-wide

Preprints

Measuring the sequence-affinity landscape of antibodies with massively parallel titration curves

biophysics more details view paper
  • Downloaded 944 times
  • Download rankings, all-time:
    • Site-wide: 5,471 out of 48,092
    • In biophysics: 141 out of 1,995
  • Year to date:
    • Site-wide: 25,513 out of 48,092
  • Since beginning of last month:
    • Site-wide: 34,898 out of 48,092

Quantifying lymphocyte receptor diversity

immunology more details view paper
  • Downloaded 772 times
  • Download rankings, all-time:
    • Site-wide: 7,454 out of 48,092
    • In immunology: 78 out of 1,078
  • Year to date:
    • Site-wide: 13,661 out of 48,092
  • Since beginning of last month:
    • Site-wide: 7,368 out of 48,092

Asymmetric adhesion of rod-shaped bacteria controls microcolony morphogenesis

biophysics more details view paper
  • Downloaded 710 times
  • Download rankings, all-time:
    • Site-wide: 8,401 out of 48,092
    • In biophysics: 230 out of 1,995
  • Year to date:
    • Site-wide: 26,233 out of 48,092
  • Since beginning of last month:
    • Site-wide: 23,170 out of 48,092

Detecting T-cell receptors involved in immune responses from single repertoire snapshots

immunology more details view paper
  • Downloaded 705 times
  • Download rankings, all-time:
    • Site-wide: 8,496 out of 48,092
    • In immunology: 96 out of 1,078
  • Year to date:
    • Site-wide: 5,940 out of 48,092
  • Since beginning of last month:
    • Site-wide: 7,100 out of 48,092

IGoR: A Tool For High-Throughput Immune Repertoire Analysis

immunology more details view paper
  • Downloaded 626 times
  • Download rankings, all-time:
    • Site-wide: 10,032 out of 48,092
    • In immunology: 128 out of 1,078
  • Year to date:
    • Site-wide: 23,352 out of 48,092
  • Since beginning of last month:
    • Site-wide: 23,084 out of 48,092

Quantifying selection in immune receptor repertoires

immunology more details view paper
  • Downloaded 541 times
  • Download rankings, all-time:
    • Site-wide: 12,122 out of 48,092
    • In immunology: 158 out of 1,078
  • Year to date:
    • Site-wide: 36,820 out of 48,092
  • Since beginning of last month:
    • Site-wide: 38,710 out of 48,092

Clonal competition in B-cell repertoires during chronic HIV-1 infection

immunology more details view paper
  • Downloaded 471 times
  • Download rankings, all-time:
    • Site-wide: 14,433 out of 48,092
    • In immunology: 197 out of 1,078
  • Year to date:
    • Site-wide: 18,019 out of 48,092
  • Since beginning of last month:
    • Site-wide: 13,024 out of 48,092

Inferring processes underlying B-cell repertoire diversity.

immunology more details view paper
  • Downloaded 460 times
  • Download rankings, all-time:
    • Site-wide: 14,798 out of 48,092
    • In immunology: 204 out of 1,078
  • Year to date:
    • Site-wide: 25,859 out of 48,092
  • Since beginning of last month:
    • Site-wide: 36,885 out of 48,092

Disorder and the neural representation of complex odors: smelling in the real world

neuroscience more details view paper
  • Downloaded 448 times
  • Download rankings, all-time:
    • Site-wide: 15,290 out of 48,092
    • In neuroscience: 2,485 out of 8,382
  • Year to date:
    • Site-wide: 31,626 out of 48,092
  • Since beginning of last month:
    • Site-wide: 23,148 out of 48,092

Fluctuating fitness shapes the clone size distribution of immune repertoires

immunology more details view paper
  • Downloaded 419 times
  • Download rankings, all-time:
    • Site-wide: 16,430 out of 48,092
    • In immunology: 233 out of 1,078
  • Year to date:
    • Site-wide: 40,599 out of 48,092
  • Since beginning of last month:
    • Site-wide: 34,793 out of 48,092

Predicting the spectrum of TCR repertoire sharing with a data-driven model of recombination

immunology more details view paper
  • Downloaded 359 times
  • Download rankings, all-time:
    • Site-wide: 19,222 out of 48,092
    • In immunology: 277 out of 1,078
  • Year to date:
    • Site-wide: 14,377 out of 48,092
  • Since beginning of last month:
    • Site-wide: 10,412 out of 48,092

Persisting fetal clonotypes influence the structure and overlap of adult human T cell receptor repertoires

immunology more details view paper
  • Downloaded 344 times
  • Download rankings, all-time:
    • Site-wide: 20,008 out of 48,092
    • In immunology: 294 out of 1,078
  • Year to date:
    • Site-wide: 39,548 out of 48,092
  • Since beginning of last month:
    • Site-wide: 40,875 out of 48,092

Closed-loop estimation of retinal network sensitivity reveals signature of efficient coding

neuroscience more details view paper
  • Downloaded 343 times
  • Download rankings, all-time:
    • Site-wide: 20,097 out of 48,092
    • In neuroscience: 3,365 out of 8,382
  • Year to date:
    • Site-wide: 33,706 out of 48,092
  • Since beginning of last month:
    • Site-wide: 35,968 out of 48,092

Habitat Fluctuations Drive Species Covariation in the Human Microbiota

microbiology more details view paper
  • Downloaded 339 times
  • Download rankings, all-time:
    • Site-wide: 20,300 out of 48,092
    • In microbiology: 1,121 out of 3,717
  • Year to date:
    • Site-wide: 42,730 out of 48,092
  • Since beginning of last month:
    • Site-wide: 40,668 out of 48,092

Active degradation of a regulator controls coordination of downstream genes

systems biology more details view paper
  • Downloaded 326 times
  • Download rankings, all-time:
    • Site-wide: 21,013 out of 48,092
    • In systems biology: 667 out of 1,427
  • Year to date:
    • Site-wide: 31,565 out of 48,092
  • Since beginning of last month:
    • Site-wide: 37,323 out of 48,092

Genesis of the αβ T-cell receptor

immunology more details view paper
  • Downloaded 311 times
  • Download rankings, all-time:
    • Site-wide: 21,933 out of 48,092
    • In immunology: 342 out of 1,078
  • Year to date:
    • Site-wide: 8,962 out of 48,092
  • Since beginning of last month:
    • Site-wide: 7,195 out of 48,092

repgenHMM: a dynamic programming tool to infer the rules of immune receptor generation from sequence data

bioinformatics more details view paper
  • Downloaded 307 times
  • Download rankings, all-time:
    • Site-wide: 22,210 out of 48,092
    • In bioinformatics: 3,146 out of 5,100
  • Year to date:
    • Site-wide: 34,803 out of 48,092
  • Since beginning of last month:
    • Site-wide: 38,933 out of 48,092

Population dynamics of immune repertoires

immunology more details view paper
  • Downloaded 301 times
  • Download rankings, all-time:
    • Site-wide: 22,623 out of 48,092
    • In immunology: 357 out of 1,078
  • Year to date:
    • Site-wide: 40,042 out of 48,092
  • Since beginning of last month:
    • Site-wide: 34,519 out of 48,092

OLGA: fast computation of generation probabilities of B- and T-cell receptor amino acid sequences and motifs

bioinformatics more details view paper
  • Downloaded 300 times
  • Download rankings, all-time:
    • Site-wide: 22,688 out of 48,092
    • In bioinformatics: 3,180 out of 5,100
  • Year to date:
    • Site-wide: 14,824 out of 48,092
  • Since beginning of last month:
    • Site-wide: 11,611 out of 48,092

Separating intrinsic interactions from extrinsic correlations in a network of sensory neurons

neuroscience more details view paper
  • Downloaded 285 times
  • Download rankings, all-time:
    • Site-wide: 23,649 out of 48,092
    • In neuroscience: 3,997 out of 8,382
  • Year to date:
    • Site-wide: 34,748 out of 48,092
  • Since beginning of last month:
    • Site-wide: 38,402 out of 48,092

Random versus maximum entropy models of neural population activity

neuroscience more details view paper
  • Downloaded 283 times
  • Download rankings, all-time:
    • Site-wide: 23,757 out of 48,092
    • In neuroscience: 4,006 out of 8,382
  • Year to date:
    • Site-wide: 40,977 out of 48,092
  • Since beginning of last month:
    • Site-wide: 40,908 out of 48,092

Mouse T cell repertoires as statistical ensembles: overall characterization and age dependence

immunology more details view paper
  • Downloaded 269 times
  • Download rankings, all-time:
    • Site-wide: 24,816 out of 48,092
    • In immunology: 402 out of 1,078
  • Year to date:
    • Site-wide: 44,263 out of 48,092
  • Since beginning of last month:
    • Site-wide: 40,724 out of 48,092

A qualitative model for the integration of conflicting exogenous and endogenous signals by dendritic cells

immunology more details view paper
  • Downloaded 265 times
  • Download rankings, all-time:
    • Site-wide: 25,099 out of 48,092
    • In immunology: 406 out of 1,078
  • Year to date:
    • Site-wide: 39,551 out of 48,092
  • Since beginning of last month:
    • Site-wide: 44,899 out of 48,092

Method for identification of condition-associated public antigen receptor sequences

immunology more details view paper
  • Downloaded 249 times
  • Download rankings, all-time:
    • Site-wide: 26,312 out of 48,092
    • In immunology: 440 out of 1,078
  • Year to date:
    • Site-wide: 37,612 out of 48,092
  • Since beginning of last month:
    • Site-wide: 43,436 out of 48,092

How a well-adapting immune system remembers

immunology more details view paper
  • Downloaded 240 times
  • Download rankings, all-time:
    • Site-wide: 27,013 out of 48,092
    • In immunology: 455 out of 1,078
  • Year to date:
    • Site-wide: 29,582 out of 48,092
  • Since beginning of last month:
    • Site-wide: 24,151 out of 48,092

Diversity of immune strategies explained by adaptation to pathogen statistics

evolutionary biology more details view paper
  • Downloaded 232 times
  • Download rankings, all-time:
    • Site-wide: 27,682 out of 48,092
    • In evolutionary biology: 2,288 out of 3,470
  • Year to date:
    • Site-wide: 43,666 out of 48,092
  • Since beginning of last month:
    • Site-wide: 41,896 out of 48,092

Precise tracking of vaccine-responding T-cell clones reveals convergent and personalized response in identical twins

immunology more details view paper
  • Downloaded 232 times
  • Download rankings, all-time:
    • Site-wide: 27,620 out of 48,092
    • In immunology: 471 out of 1,078
  • Year to date:
    • Site-wide: 29,650 out of 48,092
  • Since beginning of last month:
    • Site-wide: 30,107 out of 48,092

Physical epistatic landscape of antibody binding affinity

biophysics more details view paper
  • Downloaded 183 times
  • Download rankings, all-time:
    • Site-wide: 32,092 out of 48,092
    • In biophysics: 1,301 out of 1,995
  • Year to date:
    • Site-wide: 25,374 out of 48,092
  • Since beginning of last month:
    • Site-wide: 27,481 out of 48,092

A simple model for low variability in neural spike trains

neuroscience more details view paper
  • Downloaded 165 times
  • Download rankings, all-time:
    • Site-wide: 33,908 out of 48,092
    • In neuroscience: 5,834 out of 8,382
  • Year to date:
    • Site-wide: 29,001 out of 48,092
  • Since beginning of last month:
    • Site-wide: 30,047 out of 48,092

Blindfold learning of an accurate neural metric

neuroscience more details view paper
  • Downloaded 158 times
  • Download rankings, all-time:
    • Site-wide: 34,585 out of 48,092
    • In neuroscience: 5,956 out of 8,382
  • Year to date:
    • Site-wide: 35,920 out of 48,092
  • Since beginning of last month:
    • Site-wide: 37,406 out of 48,092

Receptor crosstalk improves concentration sensing of multiple ligands

cell biology more details view paper
  • Downloaded 104 times
  • Download rankings, all-time:
    • Site-wide: 40,450 out of 48,092
    • In cell biology: 1,872 out of 2,233
  • Year to date:
    • Site-wide: 35,394 out of 48,092
  • Since beginning of last month:
    • Site-wide: 27,790 out of 48,092

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