Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 67,044 bioRxiv papers from 295,131 authors.

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Preprints

Highly diverse Asgard archaea participate in organic matter degradation in coastal sediments

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Infection risk and extensive parental care govern the molecular evolution of Toll-like receptors in birds.

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Ectomycorrhizal fungi induce systemic resistance against insects on a non-mycorrhizal plant in a CERK1-dependent manner

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A portable and cost-effective microfluidic system for massively parallel single-cell transcriptome profiling

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  • In genomics: 325 out of 4,558
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  • Site-wide: 21 out of 67,044

Deconvolution of single-cell multi-omics layers reveals regulatory heterogeneity

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  • In genomics: 421 out of 4,558
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Direct preparation of Cas9 ribonucleoprotein from E. coli for PCR-free seamless DNA assembly

• Downloaded 2,252 times
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  • Site-wide: 1,971 out of 67,044
  • In synthetic biology: 35 out of 638
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  • Site-wide: 1,192 out of 67,044
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  • Site-wide: 4,198 out of 67,044

Augmented Reality Powers a Cognitive Prosthesis for the Blind

• Downloaded 1,940 times
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  • Site-wide: 2,544 out of 67,044
  • In animal behavior and cognition: 24 out of 1,060
• Year to date:
  • Site-wide: 5,533 out of 67,044
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  • Site-wide: 9,501 out of 67,044

WRN Helicase is a Synthetic Lethal Target in Microsatellite Unstable Cancers

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  • In cancer biology: 62 out of 2,261
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  • Site-wide: 762 out of 67,044
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  • Site-wide: 4,927 out of 67,044

High-Spatial-Resolution Multi-Omics Atlas Sequencing of Mouse Embryos via Deterministic Barcoding in Tissue

• Downloaded 1,371 times
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  • In genomics: 820 out of 4,558
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  • Site-wide: 1,093 out of 67,044
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  • Site-wide: 302 out of 67,044

Learning Structural Motif Representations For Efficient Protein Structure Search

• Downloaded 1,107 times
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  • Site-wide: 6,541 out of 67,044
  • In bioinformatics: 1,209 out of 6,614
• Year to date:
  • Site-wide: 24,641 out of 67,044
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  • Site-wide: 33,281 out of 67,044

Single-cell microRNA/mRNA co-sequencing reveals non-genetic heterogeneity and novel regulatory mechanisms

• Downloaded 1,045 times
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  • In systems biology: 206 out of 1,863
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  • Site-wide: 6,978 out of 67,044
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  • Site-wide: 44,737 out of 67,044

Asgard archaea are diverse, ubiquitous, and transcriptionally active microbes

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  • In microbiology: 294 out of 5,408
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  • Site-wide: 7,717 out of 67,044
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  • Site-wide: 27,139 out of 67,044

Deep Genomic Signature for early metastasis prediction in prostate cancer

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  • Site-wide: 7,290 out of 67,044
  • In bioinformatics: 1,300 out of 6,614
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  • Site-wide: 6,041 out of 67,044
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  • Site-wide: 18,637 out of 67,044

Deciphering signaling specificity with interpretable deep neural networks

• Downloaded 899 times
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  • In bioinformatics: 1,596 out of 6,614
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  • Site-wide: 16,872 out of 67,044
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  • Site-wide: 22,204 out of 67,044

Optimizing CRISPR/Cas9 System to Precisely Model Plasminogen Activator Inhibitor-1 Point Mutations in Mice

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  • In genetics: 772 out of 3,773
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  • Site-wide: 11,489 out of 67,044
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  • Site-wide: 18,923 out of 67,044

Cyclic-di-GMP is required for corneal infection by Pseudomonas aeruginosa and modulates host immunity

• Downloaded 789 times
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  • Site-wide: 11,201 out of 67,044
  • In microbiology: 506 out of 5,408
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  • Site-wide: 51,155 out of 67,044
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  • Site-wide: 34,979 out of 67,044

RISC: robust integration of single-cell RNA-seq datasets with different extents of cell cluster overlap

• Downloaded 689 times
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  • In bioinformatics: 2,197 out of 6,614
• Year to date:
  • Site-wide: 7,413 out of 67,044
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  • Site-wide: 19,616 out of 67,044

Discovery of the Quiescent Body that Functions as a Biological Timer for Growth Resumption of Non-growing Bacterial Cells

• Downloaded 657 times
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  • Site-wide: 14,517 out of 67,044
  • In microbiology: 713 out of 5,408
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  • Site-wide: 45,392 out of 67,044
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  • Site-wide: 55,616 out of 67,044

Recurrently deregulated lncRNAs associated with HCC tumorigenesis and metastasis revealed by genomic, epigenomic and transcriptomic profiling in paired primary tumor and PVTT samples

• Downloaded 656 times
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  • Site-wide: 14,531 out of 67,044
  • In genomics: 1,910 out of 4,558
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  • Site-wide: 52,310 out of 67,044
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  • Site-wide: 53,919 out of 67,044

Mitigating Data Scarcity in Protein Binding Prediction Using Meta-Learning

• Downloaded 587 times
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  • Site-wide: 17,011 out of 67,044
  • In bioinformatics: 2,608 out of 6,614
• Year to date:
  • Site-wide: 4,822 out of 67,044
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  • Site-wide: 7,236 out of 67,044

Super-resolution imaging reveals the evolution of higher-order chromatin folding in early carcinogenesis

• Downloaded 547 times
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  • Site-wide: 18,690 out of 67,044
  • In cancer biology: 563 out of 2,261
• Year to date:
  • Site-wide: 5,474 out of 67,044
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  • Site-wide: 13,424 out of 67,044

WindSTORM: Robust online image processing for high-throughput nanoscopy

• Downloaded 546 times
• Download rankings, all-time:
  • Site-wide: 18,762 out of 67,044
  • In bioinformatics: 2,816 out of 6,614
• Year to date:
  • Site-wide: 13,756 out of 67,044
• Since beginning of last month:
  • Site-wide: 11,123 out of 67,044

The histone chaperone FACT modulates nucleosome structure by tethering its components

• Downloaded 511 times
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  • Site-wide: 20,372 out of 67,044
  • In biochemistry: 464 out of 1,974
• Year to date:
  • Site-wide: 38,616 out of 67,044
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  • Site-wide: 44,770 out of 67,044

Spatiotemporal Gene Coexpression and Regulation in Mouse Cardiomyocytes of Early Cardiac Morphogenesis

• Downloaded 499 times
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  • Site-wide: 20,965 out of 67,044
  • In genetics: 1,407 out of 3,773
• Year to date:
  • Site-wide: 22,347 out of 67,044
• Since beginning of last month:
  • Site-wide: 52,739 out of 67,044

METABOLIC: A scalable high-throughput metabolic and biogeochemical functional trait profiler based on microbial genomes

• Downloaded 494 times
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  • Site-wide: 21,239 out of 67,044
  • In bioinformatics: 3,088 out of 6,614
• Year to date:
  • Site-wide: 6,474 out of 67,044
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  • Site-wide: 5,515 out of 67,044

A chromosome-level genome of black rockfish, Sebastes schlegelii, provides insights into the evolution of live birth

• Downloaded 463 times
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  • Site-wide: 23,020 out of 67,044
  • In genomics: 2,542 out of 4,558
• Year to date:
  • Site-wide: 7,184 out of 67,044
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  • Site-wide: 25,242 out of 67,044

Divergence in the face of gene flow in two Charadrius plovers along the Chinese coast

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  • In evolutionary biology: 1,719 out of 4,461
• Year to date:
  • Site-wide: 19,366 out of 67,044
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  • Site-wide: 25,116 out of 67,044

Single-nucleus RNA-seq identifies Huntington disease astrocyte states

• Downloaded 427 times
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  • Site-wide: 25,275 out of 67,044
  • In neuroscience: 4,345 out of 12,017
• Year to date:
  • Site-wide: 8,245 out of 67,044
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  • Site-wide: 1,295 out of 67,044

Enhanced super-resolution microscopy by extreme value based emitter recovery

• Downloaded 411 times
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  • Site-wide: 26,375 out of 67,044
  • In cell biology: 1,214 out of 3,248
• Year to date:
  • Site-wide: 36,217 out of 67,044
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  • Site-wide: 35,863 out of 67,044

Widespread Inter-Chromosomal Epistasis Regulates Glucose Homeostasis And Gene Expression

• Downloaded 404 times
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  • Site-wide: 26,885 out of 67,044
  • In genetics: 1,750 out of 3,773
• Year to date:
  • Site-wide: 62,705 out of 67,044
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  • Site-wide: 59,705 out of 67,044

Comparative analyses of 3654 chloroplast genomes unraveled new insights into the evolutionary mechanism of green plants

• Downloaded 329 times
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  • Site-wide: 33,132 out of 67,044
  • In plant biology: 936 out of 1,946
• Year to date:
  • Site-wide: 12,598 out of 67,044
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  • Site-wide: 15,478 out of 67,044

Neo-sex chromosomes and demography shape genetic diversity in the Critically Endangered Raso lark

• Downloaded 289 times
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  • Site-wide: 37,130 out of 67,044
  • In genomics: 3,382 out of 4,558
• Year to date:
  • Site-wide: 15,228 out of 67,044
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  • Site-wide: 22,761 out of 67,044

Demographic histories and genome-wide patterns of divergence in incipient species of shorebirds

• Downloaded 287 times
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  • Site-wide: 37,325 out of 67,044
  • In evolutionary biology: 2,762 out of 4,461
• Year to date:
  • Site-wide: 15,371 out of 67,044
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  • Site-wide: 27,186 out of 67,044

Separating an allele associated with late flowering and slow maturation of Arabidopsis thaliana from population structure

• Downloaded 286 times
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  • Site-wide: 37,419 out of 67,044
  • In genetics: 2,315 out of 3,773
• Year to date:
  • Site-wide: 60,012 out of 67,044
• Since beginning of last month:
  • Site-wide: 47,582 out of 67,044

Screening of FDA-approved Drugs and Identification of Novel Lassa Virus Entry Inhibitors

• Downloaded 279 times
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  • Site-wide: 38,202 out of 67,044
  • In microbiology: 2,495 out of 5,408
• Year to date:
  • Site-wide: 42,828 out of 67,044
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  • Site-wide: 33,496 out of 67,044

Treatment of Graft-versus-Host Disease by Echinomycin in a New Humanized Mouse Model

• Downloaded 277 times
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  • Site-wide: 38,383 out of 67,044
  • In immunology: 810 out of 1,706
• Year to date:
  • Site-wide: 50,516 out of 67,044
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  • Site-wide: 45,273 out of 67,044

The first set of universal nuclear protein-coding loci markers for avian phylogenetic and population genetic studies

• Downloaded 277 times
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  • Site-wide: 38,412 out of 67,044
  • In evolutionary biology: 2,845 out of 4,461
• Year to date:
  • Site-wide: 42,952 out of 67,044
• Since beginning of last month:
  • Site-wide: 64,067 out of 67,044

Mammalian CST averts replication failure by preventing G-quadruplex accumulation

• Downloaded 270 times
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  • Site-wide: 39,313 out of 67,044
  • In molecular biology: 1,171 out of 2,139
• Year to date:
  • Site-wide: 38,757 out of 67,044
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  • Site-wide: 64,972 out of 67,044

The closed-loop pathways of signaling molecules

• Downloaded 266 times
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  • Site-wide: 39,745 out of 67,044
  • In bioinformatics: 4,740 out of 6,614
• Year to date:
  • Site-wide: 63,125 out of 67,044
• Since beginning of last month:
  • Site-wide: 36,523 out of 67,044

Genome and community-level interaction insights on wide carbon utilizing and element cycling function of Hydrothermarchaeota from hydrothermal sediment

• Downloaded 265 times
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  • Site-wide: 39,780 out of 67,044
  • In ecology: 1,355 out of 2,862
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  • Site-wide: 17,313 out of 67,044
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  • Site-wide: 7,232 out of 67,044

Molecular basis of P[6] and P[8] major human rotavirus VP8* domain interactions with histo-blood group antigens

• Downloaded 251 times
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  • In biochemistry: 1,137 out of 1,974
• Year to date:
  • Site-wide: 18,650 out of 67,044
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  • Site-wide: 31,597 out of 67,044

Regrowth-delay Body as a Bacterial Subcellular Structure marking multidrug tolerant Persisters

• Downloaded 185 times
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  • In microbiology: 3,591 out of 5,408
• Year to date:
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  • Site-wide: 65,268 out of 67,044

Increase in weighting of vision vs. proprioception associated with force field adaptation

• Downloaded 143 times
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  • Site-wide: 56,222 out of 67,044
  • In neuroscience: 10,032 out of 12,017
• Year to date:
  • Site-wide: 35,930 out of 67,044
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  • Site-wide: 54,212 out of 67,044

Genome assembly of the common pheasant Phasianus colchicus, a model for speciation and ecological genomics

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  • In genomics: 4,237 out of 4,558
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  • Site-wide: 6,670 out of 67,044

Disruption of the kringle 1 domain of prothrombin leads to late onset mortality in zebrafish

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  • In genetics: 3,468 out of 3,773
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  • Site-wide: 36,882 out of 67,044

Prototheca zopfii Genotype II induces mitochondrial apoptosis in models of bovine mastitis

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  • Site-wide: 60,657 out of 67,044
  • In microbiology: 4,665 out of 5,408
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  • Site-wide: 49,663 out of 67,044

The complete plastid genomes of two Fabaceae orphan crops from Africa

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  • Site-wide: 63,392 out of 67,044
  • In genomics: 4,428 out of 4,558
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  • Site-wide: 64,509 out of 67,044
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  • Site-wide: 60,430 out of 67,044

High-throughput living-cell protein crosslinking analysis uncovers the physiological relevance of forming the "inserted" state of the ATP synthase ϵ-subunit

• Downloaded 83 times
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  • Site-wide: 63,540 out of 67,044
  • In biochemistry: 1,856 out of 1,974
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  • Site-wide: 48,179 out of 67,044

Meta-16S rRNA gene phylogenetic reconstruction reveals astonishing diversity of the cosmopolitan myxobacteria

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  • Site-wide: 63,791 out of 67,044
  • In microbiology: 5,026 out of 5,408
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  • Site-wide: 60,671 out of 67,044