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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 55,243 bioRxiv papers from 254,835 authors.

Author: Antonis Rokas

Rankings

  • All-time downloads: 12,935 (rank: 2,146 (tie) out of 254,835)
  • Categories:
    • bioinformatics: 868 (rank: 7,702 (tie) out of 22,193)
    • evolutionary biology: 6,904 (rank: 77 out of 13,668)
    • genomics: 2,635 (rank: 4,595 (tie) out of 28,596)
    • microbiology: 1,388 (rank: 1,360 (tie) out of 24,126)
    • plant biology: 1,140 (rank: 1,046 (tie) out of 8,170)

Downloads per author, site-wide

Preprints

Evaluating Fast Maximum Likelihood-Based Phylogenetic Programs Using Empirical Phylogenomic Data Sets

evolutionary biology more details view paper
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A global co-expression network approach for connecting genes to specialized metabolic pathways in plants

plant biology more details view paper
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    • In plant biology: 93 out of 1,513
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RNAseq in the mosquito maxillary palp: a little antennal RNA goes a long way

genomics more details view paper
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in silico Whole Genome Sequencer & Analyzer (iWGS): a computational pipeline to guide the design and analysis of de novo genome sequencing studies

bioinformatics more details view paper
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Genome wide association analysis uncovers variants for reproductive variation across dog breeds and links to domestication

evolutionary biology more details view paper
  • Downloaded 845 times
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Computing the Internode Certainty and related measures from partial gene trees.

evolutionary biology more details view paper
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Drivers of genetic diversity in secondary metabolic gene clusters within a fungal species

genomics more details view paper
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Eukaryotic acquisition of a bacterial operon

evolutionary biology more details view paper
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    • In evolutionary biology: 820 out of 3,821
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A robust phylogenomic timetree for biotechnologically and medically important fungi in the genera Aspergillus and Penicillium

evolutionary biology more details view paper
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    • In evolutionary biology: 827 out of 3,821
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Quartet-based computations of internode certainty provide accurate and robust measures of phylogenetic incongruence

evolutionary biology more details view paper
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    • In evolutionary biology: 984 out of 3,821
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Extensive loss of cell cycle and DNA repair genes in an ancient lineage of bipolar budding yeasts

evolutionary biology more details view paper
  • Downloaded 493 times
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    • In evolutionary biology: 1,252 out of 3,821
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Reconstructing the backbone of the Saccharomycotina yeast phylogeny using genome-scale data

evolutionary biology more details view paper
  • Downloaded 364 times
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    • In evolutionary biology: 1,809 out of 3,821
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Examination of signatures of recent positive selection on genes involved in human sialic acid biology

evolutionary biology more details view paper
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    • In evolutionary biology: 1,880 out of 3,821
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Genomic features and evolution of the conditionally dispensable chromosome in the tangerine pathotype of Alternaria alternata

microbiology more details view paper
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    • Site-wide: 12,877 out of 55,243

A novel homology-based algorithm for the identification of physically linked clusters of paralogous genes

genomics more details view paper
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    • In genomics: 2,663 out of 3,910
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integRATE: a desirability-based data integration framework for the prioritization of candidate genes across heterogeneous omics and its application to preterm birth

genomics more details view paper
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Signatures of recent positive selection in enhancers across 41 human tissues

evolutionary biology more details view paper
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    • In evolutionary biology: 2,195 out of 3,821
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Evidence for loss and adaptive reacquisition of alcoholic fermentation in an early-derived fructophilic yeast lineage

genomics more details view paper
  • Downloaded 291 times
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    • Site-wide: 28,243 out of 55,243
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    • Site-wide: 49,593 out of 55,243

Variation and selection on codon usage bias across an entire subphylum

evolutionary biology more details view paper
  • Downloaded 291 times
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    • In evolutionary biology: 2,215 out of 3,821
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    • Site-wide: 10,453 out of 55,243

A LaeA- and BrlA-dependent cellular network governs tissue-specific secondary metabolism in the human pathogen Aspergillus fumigatus

microbiology more details view paper
  • Downloaded 237 times
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    • In microbiology: 2,075 out of 4,355
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    • Site-wide: 43,787 out of 55,243

Copy number variation in fungi and its implications for wine yeast genetic diversity and adaptation

microbiology more details view paper
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    • In microbiology: 2,093 out of 4,355
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    • Site-wide: 49,950 out of 55,243

Characterizing the pathogenic, genomic, and chemical traits of Aspergillus fischeri, a close relative of the major human fungal pathogen Aspergillus fumigatus

microbiology more details view paper
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    • In microbiology: 2,086 out of 4,355
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    • Site-wide: 38,319 out of 55,243

Extensive Copy Number Variation in Fermentation-Related Genes among Saccharomyces cerevisiae Wine Strains

evolutionary biology more details view paper
  • Downloaded 224 times
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    • In evolutionary biology: 2,642 out of 3,821
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    • Site-wide: 36,077 out of 55,243

Conservation and Divergence in the Asexual Sporulation Gene Regulatory Network Across a Genus of Filamentous Fungi

microbiology more details view paper
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    • In microbiology: 2,538 out of 4,355
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    • Site-wide: 49,118 out of 55,243

Rapid phenotypic and metabolomic domestication of wild Penicillium molds on cheese

microbiology more details view paper
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    • In microbiology: 2,725 out of 4,355
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    • Site-wide: 19,270 out of 55,243

The Genomic Geography and Evolution of Clusters of Tandemly Duplicated Genes in the Human and Mammal Genomes

evolutionary biology more details view paper
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    • In evolutionary biology: 3,315 out of 3,821
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The impact of natural selection on the evolution and function of placentally expressed galectins

evolutionary biology more details view paper
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    • In evolutionary biology: 3,595 out of 3,821
  • Year to date:
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    • Site-wide: 48,603 out of 55,243

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