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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 52,506 bioRxiv papers from 243,425 authors.

Author: Joshua Quick

  • Most recently observed institution: Institute of Microbiology and Infection, University of Birmingham, Birmingham B15 2TT, UK

Rankings

  • All-time downloads: 31,452 (rank: 452 out of 243,425)
  • Categories:
    • bioinformatics: 15,830 (rank: 95 out of 21,556)
    • epidemiology: 3,472 (rank: 91 (tie) out of 9,128)
    • evolutionary biology: 823 (rank: 3,383 (tie) out of 13,529)
    • genomics: 11,327 (rank: 685 (tie) out of 28,107)

Downloads per author, site-wide

Preprints

A complete bacterial genome assembled de novo using only nanopore sequencing data

bioinformatics more details view paper
  • Downloaded 9,646 times
  • Download rankings, all-time:
    • Site-wide: 98 out of 52,506
    • In bioinformatics: 19 out of 5,498
  • Year to date:
    • Site-wide: 2,745 out of 52,506
  • Since beginning of last month:
    • Site-wide: 3,133 out of 52,506

De novo Identification of DNA Modifications Enabled by Genome-Guided Nanopore Signal Processing

bioinformatics more details view paper
  • Downloaded 6,184 times
  • Download rankings, all-time:
    • Site-wide: 217 out of 52,506
    • In bioinformatics: 40 out of 5,498
  • Year to date:
    • Site-wide: 933 out of 52,506
  • Since beginning of last month:
    • Site-wide: 2,181 out of 52,506

Nanopore native RNA sequencing of a human poly(A) transcriptome

genomics more details view paper
  • Downloaded 5,368 times
  • Download rankings, all-time:
    • Site-wide: 293 out of 52,506
    • In genomics: 79 out of 3,756
  • Year to date:
    • Site-wide: 157 out of 52,506
  • Since beginning of last month:
    • Site-wide: 317 out of 52,506

Multiplex PCR method for MinION and Illumina sequencing of Zika and other virus genomes directly from clinical samples

genomics more details view paper
  • Downloaded 3,982 times
  • Download rankings, all-time:
    • Site-wide: 517 out of 52,506
    • In genomics: 139 out of 3,756
  • Year to date:
    • Site-wide: 7,222 out of 52,506
  • Since beginning of last month:
    • Site-wide: 6,223 out of 52,506

Virus genomes reveal the factors that spread and sustained the West African Ebola epidemic.

epidemiology more details view paper
  • Downloaded 2,006 times
  • Download rankings, all-time:
    • Site-wide: 1,833 out of 52,506
    • In epidemiology: 16 out of 1,528
  • Year to date:
    • Site-wide: 20,790 out of 52,506
  • Since beginning of last month:
    • Site-wide: 35,193 out of 52,506

A reference bacterial genome dataset generated on the MinION™ portable single-molecule nanopore sequencer

genomics more details view paper
  • Downloaded 1,977 times
  • Download rankings, all-time:
    • Site-wide: 1,881 out of 52,506
    • In genomics: 415 out of 3,756
  • Year to date:
    • Site-wide: 34,943 out of 52,506
  • Since beginning of last month:
    • Site-wide: 47,776 out of 52,506

Multiple introductions of Zika virus into the United States revealed through genomic epidemiology

epidemiology more details view paper
  • Downloaded 1,466 times
  • Download rankings, all-time:
    • Site-wide: 3,091 out of 52,506
    • In epidemiology: 33 out of 1,528
  • Year to date:
    • Site-wide: 30,809 out of 52,506
  • Since beginning of last month:
    • Site-wide: 27,365 out of 52,506

An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar

evolutionary biology more details view paper
  • Downloaded 823 times
  • Download rankings, all-time:
    • Site-wide: 7,792 out of 52,506
    • In evolutionary biology: 550 out of 3,671
  • Year to date:
    • Site-wide: 8,374 out of 52,506
  • Since beginning of last month:
    • Site-wide: 13,232 out of 52,506

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