Author: Nathan Grubaugh
- ORCiD: http://orcid.org/0000-0003-2031-1933
- Most recently observed institution: Yale School of Public Health
Rankings
- All-time downloads: 158,893 (rank: 976 )
- Categories:
- allergy and immunology: 5,085 (rank: 522 (tie) )
- epidemiology: 35,627 (rank: 769 )
- genomics: 2,605 (rank: 12,953 (tie) )
- immunology: 1,174 (rank: 16,723 (tie) )
- infectious diseases: 108,522 (rank: 527 )
- microbiology: 1,554 (rank: 16,103 (tie) )
- public and global health: 3,588 (rank: 2,086 (tie) )
Downloads per author, site-wide
Preprints
SalivaDirect: Simple and sensitive molecular diagnostic test for SARS-CoV-2 surveillance
infectious diseases more details view paper- Downloaded 42,379 times
- Download rankings, all-time:
- Site-wide: 232
- In infectious diseases: 89
- Year to date:
- Site-wide: 7,369
- Since beginning of last month:
- Site-wide: 7,627
Diverse Functional Autoantibodies in Patients with COVID-19
infectious diseases more details view paper- Downloaded 27,599 times
- Download rankings, all-time:
- Site-wide: 389
- In infectious diseases: 145
- Year to date:
- Site-wide: 3,408
- Since beginning of last month:
- Site-wide: 8,156
Viral dynamics of SARS-CoV-2 variants in vaccinated and unvaccinated individuals
epidemiology more details view paper- Downloaded 12,555 times
- Download rankings, all-time:
- Site-wide: 1,038
- In epidemiology: 155
- Year to date:
- Site-wide: 7,439
- Since beginning of last month:
- Site-wide: 3,437
SARS-CoV-2 viral dynamics in acute infections
epidemiology more details view paper- Downloaded 11,249 times
- Download rankings, all-time:
- Site-wide: 1,194
- In epidemiology: 170
- Year to date:
- Site-wide: 7,619
- Since beginning of last month:
- Site-wide: 11,294
Saliva viral load is a dynamic unifying correlate of COVID-19 severity and mortality
infectious diseases more details view paper- Downloaded 10,710 times
- Download rankings, all-time:
- Site-wide: 1,271
- In infectious diseases: 404
- Year to date:
- Site-wide: 7,469
- Since beginning of last month:
- Site-wide: 13,784
Impact of circulating SARS-CoV-2 variants on mRNA vaccine-induced immunity in uninfected and previously infected individuals
infectious diseases more details view paper- Downloaded 5,404 times
- Download rankings, all-time:
- Site-wide: 3,159
- In infectious diseases: 784
- Year to date:
- Site-wide: 34,901
- Since beginning of last month:
- Site-wide: 58,883
Longitudinal immunological analyses reveal inflammatory misfiring in severe COVID-19 patients
infectious diseases more details view paper- Downloaded 5,112 times
- Download rankings, all-time:
- Site-wide: 3,397
- In infectious diseases: 819
- Year to date:
- Site-wide: 110,985
- Since beginning of last month:
- Site-wide: 30,917
Kinetics of antibody responses dictate COVID-19 outcome
allergy and immunology more details view paper- Downloaded 5,109 times
- Download rankings, all-time:
- Site-wide: 3,403
- In allergy and immunology: 26
- Year to date:
- Site-wide: 30,557
- Since beginning of last month:
- Site-wide: 25,853
PCR assay to enhance global surveillance for SARS-CoV-2 variants of concern
infectious diseases more details view paper- Downloaded 4,443 times
- Download rankings, all-time:
- Site-wide: 4,110
- In infectious diseases: 915
- Year to date:
- Site-wide: 67,064
- Since beginning of last month:
- Site-wide: 23,330
Longitudinal immune profiling of a SARS-CoV-2 reinfection in a solid organ transplant recipient
infectious diseases more details view paper- Downloaded 3,229 times
- Download rankings, all-time:
- Site-wide: 6,587
- In infectious diseases: 1,247
- Year to date:
- Site-wide: 30,095
- Since beginning of last month:
- Site-wide: 42,767
Variant abundance estimation for SARS-CoV-2 in wastewater using RNA-Seq quantification
epidemiology more details view paper- Downloaded 3,053 times
- Download rankings, all-time:
- Site-wide: 7,126
- In epidemiology: 633
- Year to date:
- Site-wide: 7,465
- Since beginning of last month:
- Site-wide: 19,540
Accelerated SARS-CoV-2 intrahost evolution leading to distinct genotypes during chronic infection
infectious diseases more details view paper- Downloaded 2,808 times
- Download rankings, all-time:
- Site-wide: 8,048
- In infectious diseases: 1,434
- Year to date:
- Site-wide: 6,433
- Since beginning of last month:
- Site-wide: 11,976
Genome sequencing reveals Zika virus diversity and spread in the Americas
genomics more details view paper- Downloaded 2,609 times
- Download rankings, all-time:
- Site-wide: 8,974
- In genomics: 843
- Year to date:
- Site-wide: 145,094
- Since beginning of last month:
- Site-wide: 15,857
Pooling saliva to increase SARS-CoV-2 testing capacity
infectious diseases more details view paper- Downloaded 2,539 times
- Download rankings, all-time:
- Site-wide: 9,357
- In infectious diseases: 1,536
- Year to date:
- Site-wide: 31,193
- Since beginning of last month:
- Site-wide: 72,404
Global disparities in SARS-CoV-2 genomic surveillance
epidemiology more details view paper- Downloaded 2,514 times
- Download rankings, all-time:
- Site-wide: 9,486
- In epidemiology: 770
- Year to date:
- Site-wide: 18,856
- Since beginning of last month:
- Site-wide: 12,745
Early introductions and community transmission of SARS-CoV-2 variant B.1.1.7 in the United States
public and global health more details view paper- Downloaded 1,899 times
- Download rankings, all-time:
- Site-wide: 14,575
- In public and global health: 369
- Year to date:
- Site-wide: 20,839
- Since beginning of last month:
- Site-wide: 23,442
SARS-CoV-2 infection in pregnancy is associated with robust inflammatory response at the maternal-fetal interface
infectious diseases more details view paper- Downloaded 1,887 times
- Download rankings, all-time:
- Site-wide: 14,711
- In infectious diseases: 1,976
- Year to date:
- Site-wide: 12,134
- Since beginning of last month:
- Site-wide: 36,988
Multiple introductions of Zika virus into the United States revealed through genomic epidemiology
epidemiology more details view paper- Downloaded 1,855 times
- Download rankings, all-time:
- Site-wide: 15,119
- In epidemiology: 1,082
- Year to date:
- Site-wide: 58,893
- Since beginning of last month:
- Site-wide: 179,027
Evaluation of saliva self-collection devices for SARS-CoV-2 diagnostics
public and global health more details view paper- Downloaded 1,738 times
- Download rankings, all-time:
- Site-wide: 16,703
- In public and global health: 401
- Year to date:
- Site-wide: 16,507
- Since beginning of last month:
- Site-wide: 28,206
Long SARS-CoV-2 nucleocapsid sequences in blood monocytes collected soon after hospital admission
microbiology more details view paper- Downloaded 1,565 times
- Download rankings, all-time:
- Site-wide: 19,710
- In microbiology: 1,125
- Year to date:
- Site-wide: 53,064
- Since beginning of last month:
- Site-wide: 67,741
Evidence for SARS-CoV-2 Spike Protein in the Urine of COVID-19 patients
infectious diseases more details view paper- Downloaded 1,438 times
- Download rankings, all-time:
- Site-wide: 22,581
- In infectious diseases: 2,458
- Year to date:
- Site-wide: 56,425
- Since beginning of last month:
- Site-wide: 48,851
Comparative transmissibility of SARS-CoV-2 variants Delta and Alpha in New England, USA
epidemiology more details view paper- Downloaded 1,375 times
- Download rankings, all-time:
- Site-wide: 24,292
- In epidemiology: 1,489
- Year to date:
- Site-wide: 73,527
- Since beginning of last month:
- Site-wide: 48,645
A stem-loop RNA RIG-I agonist confers prophylactic and therapeutic protection against acute and chronic SARS-CoV-2 infection in mice
immunology more details view paper- Downloaded 1,204 times
- Download rankings, all-time:
- Site-wide: 29,949
- In immunology: 1,110
- Year to date:
- Site-wide: 13,221
- Since beginning of last month:
- Site-wide: 32,482
Combining genomic and epidemiological data to compare the transmissibility of SARS-CoV-2 lineages
epidemiology more details view paper- Downloaded 1,034 times
- Download rankings, all-time:
- Site-wide: 37,960
- In epidemiology: 2,043
- Year to date:
- Site-wide: 44,902
- Since beginning of last month:
- Site-wide: 68,494
Lying in wait: the resurgence of dengue virus after the Zika epidemic in Brazil
epidemiology more details view paper- Downloaded 969 times
- Download rankings, all-time:
- Site-wide: 41,958
- In epidemiology: 2,186
- Year to date:
- Site-wide: 134,061
- Since beginning of last month:
- Site-wide: 101,881
Tracking Smell Loss to Identify Healthcare Workers with SARS-CoV-2 Infection
infectious diseases more details view paper- Downloaded 746 times
- Download rankings, all-time:
- Site-wide: 62,352
- In infectious diseases: 4,223
- Year to date:
- Site-wide: 155,543
- Since beginning of last month:
- Site-wide: 67,627
Insights into the limited global spread of the immune evasive SARS-CoV-2 variant Mu
epidemiology more details view paper- Downloaded 564 times
- Download rankings, all-time:
- Site-wide: 90,822
- In epidemiology: 3,976
- Year to date:
- Site-wide: 128,143
- Since beginning of last month:
- Site-wide: 83,160
COVID-19 Outcomes and Sequencing of SARS-CoV-2 isolated from Veterans in New England
infectious diseases more details view paper- Downloaded 449 times
- Download rankings, all-time:
- Site-wide: 116,952
- In infectious diseases: 5,915
- Year to date:
- Site-wide: 126,499
- Since beginning of last month:
- Site-wide: 110,373
One Million and Counting: Estimates of Deaths in the United States from Ancestral SARS-CoV-2 and Variants
epidemiology more details view paper- Downloaded 374 times
- Download rankings, all-time:
- Site-wide: 137,834
- In epidemiology: 5,810
- Year to date:
- Site-wide: 32,697
- Since beginning of last month:
- Site-wide: 95,365
A Deep Learning Approach to Forecast Short-Term COVID-19 Cases and Deaths in the US
epidemiology more details view paper- Downloaded 173 times
- Download rankings, all-time:
- Site-wide: 193,867
- In epidemiology: 7,639
- Year to date:
- Site-wide: 148,420
- Since beginning of last month:
- Site-wide: 45,067
Interactions between seasonal temperature variation and temporal synchrony drive increased arbovirus co-infection incidence
epidemiology more details view paper- Downloaded 165 times
- Download rankings, all-time:
- Site-wide: 195,613
- In epidemiology: 7,664
- Year to date:
- Site-wide: 200,283
- Since beginning of last month:
- Site-wide: 157,360
Routine Saliva Testing for SARS-CoV-2 in Children: Partnering with Childcare Centers in the Greater New Haven Community
infectious diseases more details view paper- Downloaded 146 times
- Download rankings, all-time:
- Site-wide: 199,310
- In infectious diseases: 8,278
- Year to date:
- Site-wide: 186,362
- Since beginning of last month:
- Site-wide: 135,090
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News
- 27 Nov 2020: The website and API now include results pulled from medRxiv as well as bioRxiv.
- 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
- 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
- 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
- 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
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- 22 Jan 2019: Nature just published an article about Rxivist and our data.
- 13 Jan 2019: The Rxivist preprint is live!