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Author: Nathan Grubaugh

Rankings

  • All-time downloads: 158,893 (rank: 976 )
  • Categories:
    • allergy and immunology: 5,085 (rank: 522 (tie) )
    • epidemiology: 35,627 (rank: 769 )
    • genomics: 2,605 (rank: 12,953 (tie) )
    • immunology: 1,174 (rank: 16,723 (tie) )
    • infectious diseases: 108,522 (rank: 527 )
    • microbiology: 1,554 (rank: 16,103 (tie) )
    • public and global health: 3,588 (rank: 2,086 (tie) )

Downloads per author, site-wide

Preprints

SalivaDirect: Simple and sensitive molecular diagnostic test for SARS-CoV-2 surveillance

infectious diseases more details view paper
  • Downloaded 42,379 times
  • Download rankings, all-time:
    • Site-wide: 232
    • In infectious diseases: 89
  • Year to date:
    • Site-wide: 7,369
  • Since beginning of last month:
    • Site-wide: 7,627

Diverse Functional Autoantibodies in Patients with COVID-19

infectious diseases more details view paper
  • Downloaded 27,599 times
  • Download rankings, all-time:
    • Site-wide: 389
    • In infectious diseases: 145
  • Year to date:
    • Site-wide: 3,408
  • Since beginning of last month:
    • Site-wide: 8,156

Viral dynamics of SARS-CoV-2 variants in vaccinated and unvaccinated individuals

epidemiology more details view paper
  • Downloaded 12,555 times
  • Download rankings, all-time:
    • Site-wide: 1,038
    • In epidemiology: 155
  • Year to date:
    • Site-wide: 7,439
  • Since beginning of last month:
    • Site-wide: 3,437

SARS-CoV-2 viral dynamics in acute infections

epidemiology more details view paper
  • Downloaded 11,249 times
  • Download rankings, all-time:
    • Site-wide: 1,194
    • In epidemiology: 170
  • Year to date:
    • Site-wide: 7,619
  • Since beginning of last month:
    • Site-wide: 11,294

Saliva viral load is a dynamic unifying correlate of COVID-19 severity and mortality

infectious diseases more details view paper
  • Downloaded 10,710 times
  • Download rankings, all-time:
    • Site-wide: 1,271
    • In infectious diseases: 404
  • Year to date:
    • Site-wide: 7,469
  • Since beginning of last month:
    • Site-wide: 13,784

Impact of circulating SARS-CoV-2 variants on mRNA vaccine-induced immunity in uninfected and previously infected individuals

infectious diseases more details view paper
  • Downloaded 5,404 times
  • Download rankings, all-time:
    • Site-wide: 3,159
    • In infectious diseases: 784
  • Year to date:
    • Site-wide: 34,901
  • Since beginning of last month:
    • Site-wide: 58,883

Longitudinal immunological analyses reveal inflammatory misfiring in severe COVID-19 patients

infectious diseases more details view paper
  • Downloaded 5,112 times
  • Download rankings, all-time:
    • Site-wide: 3,397
    • In infectious diseases: 819
  • Year to date:
    • Site-wide: 110,985
  • Since beginning of last month:
    • Site-wide: 30,917

Kinetics of antibody responses dictate COVID-19 outcome

allergy and immunology more details view paper
  • Downloaded 5,109 times
  • Download rankings, all-time:
    • Site-wide: 3,403
    • In allergy and immunology: 26
  • Year to date:
    • Site-wide: 30,557
  • Since beginning of last month:
    • Site-wide: 25,853

PCR assay to enhance global surveillance for SARS-CoV-2 variants of concern

infectious diseases more details view paper
  • Downloaded 4,443 times
  • Download rankings, all-time:
    • Site-wide: 4,110
    • In infectious diseases: 915
  • Year to date:
    • Site-wide: 67,064
  • Since beginning of last month:
    • Site-wide: 23,330

Longitudinal immune profiling of a SARS-CoV-2 reinfection in a solid organ transplant recipient

infectious diseases more details view paper
  • Downloaded 3,229 times
  • Download rankings, all-time:
    • Site-wide: 6,587
    • In infectious diseases: 1,247
  • Year to date:
    • Site-wide: 30,095
  • Since beginning of last month:
    • Site-wide: 42,767

Variant abundance estimation for SARS-CoV-2 in wastewater using RNA-Seq quantification

epidemiology more details view paper
  • Downloaded 3,053 times
  • Download rankings, all-time:
    • Site-wide: 7,126
    • In epidemiology: 633
  • Year to date:
    • Site-wide: 7,465
  • Since beginning of last month:
    • Site-wide: 19,540

Accelerated SARS-CoV-2 intrahost evolution leading to distinct genotypes during chronic infection

infectious diseases more details view paper
  • Downloaded 2,808 times
  • Download rankings, all-time:
    • Site-wide: 8,048
    • In infectious diseases: 1,434
  • Year to date:
    • Site-wide: 6,433
  • Since beginning of last month:
    • Site-wide: 11,976

Genome sequencing reveals Zika virus diversity and spread in the Americas

genomics more details view paper
  • Downloaded 2,609 times
  • Download rankings, all-time:
    • Site-wide: 8,974
    • In genomics: 843
  • Year to date:
    • Site-wide: 145,094
  • Since beginning of last month:
    • Site-wide: 15,857

Pooling saliva to increase SARS-CoV-2 testing capacity

infectious diseases more details view paper
  • Downloaded 2,539 times
  • Download rankings, all-time:
    • Site-wide: 9,357
    • In infectious diseases: 1,536
  • Year to date:
    • Site-wide: 31,193
  • Since beginning of last month:
    • Site-wide: 72,404

Global disparities in SARS-CoV-2 genomic surveillance

epidemiology more details view paper
  • Downloaded 2,514 times
  • Download rankings, all-time:
    • Site-wide: 9,486
    • In epidemiology: 770
  • Year to date:
    • Site-wide: 18,856
  • Since beginning of last month:
    • Site-wide: 12,745

Early introductions and community transmission of SARS-CoV-2 variant B.1.1.7 in the United States

public and global health more details view paper
  • Downloaded 1,899 times
  • Download rankings, all-time:
    • Site-wide: 14,575
    • In public and global health: 369
  • Year to date:
    • Site-wide: 20,839
  • Since beginning of last month:
    • Site-wide: 23,442

SARS-CoV-2 infection in pregnancy is associated with robust inflammatory response at the maternal-fetal interface

infectious diseases more details view paper
  • Downloaded 1,887 times
  • Download rankings, all-time:
    • Site-wide: 14,711
    • In infectious diseases: 1,976
  • Year to date:
    • Site-wide: 12,134
  • Since beginning of last month:
    • Site-wide: 36,988

Multiple introductions of Zika virus into the United States revealed through genomic epidemiology

epidemiology more details view paper
  • Downloaded 1,855 times
  • Download rankings, all-time:
    • Site-wide: 15,119
    • In epidemiology: 1,082
  • Year to date:
    • Site-wide: 58,893
  • Since beginning of last month:
    • Site-wide: 179,027

Evaluation of saliva self-collection devices for SARS-CoV-2 diagnostics

public and global health more details view paper
  • Downloaded 1,738 times
  • Download rankings, all-time:
    • Site-wide: 16,703
    • In public and global health: 401
  • Year to date:
    • Site-wide: 16,507
  • Since beginning of last month:
    • Site-wide: 28,206

Long SARS-CoV-2 nucleocapsid sequences in blood monocytes collected soon after hospital admission

microbiology more details view paper
  • Downloaded 1,565 times
  • Download rankings, all-time:
    • Site-wide: 19,710
    • In microbiology: 1,125
  • Year to date:
    • Site-wide: 53,064
  • Since beginning of last month:
    • Site-wide: 67,741

Evidence for SARS-CoV-2 Spike Protein in the Urine of COVID-19 patients

infectious diseases more details view paper
  • Downloaded 1,438 times
  • Download rankings, all-time:
    • Site-wide: 22,581
    • In infectious diseases: 2,458
  • Year to date:
    • Site-wide: 56,425
  • Since beginning of last month:
    • Site-wide: 48,851

Comparative transmissibility of SARS-CoV-2 variants Delta and Alpha in New England, USA

epidemiology more details view paper
  • Downloaded 1,375 times
  • Download rankings, all-time:
    • Site-wide: 24,292
    • In epidemiology: 1,489
  • Year to date:
    • Site-wide: 73,527
  • Since beginning of last month:
    • Site-wide: 48,645

A stem-loop RNA RIG-I agonist confers prophylactic and therapeutic protection against acute and chronic SARS-CoV-2 infection in mice

immunology more details view paper
  • Downloaded 1,204 times
  • Download rankings, all-time:
    • Site-wide: 29,949
    • In immunology: 1,110
  • Year to date:
    • Site-wide: 13,221
  • Since beginning of last month:
    • Site-wide: 32,482

Combining genomic and epidemiological data to compare the transmissibility of SARS-CoV-2 lineages

epidemiology more details view paper
  • Downloaded 1,034 times
  • Download rankings, all-time:
    • Site-wide: 37,960
    • In epidemiology: 2,043
  • Year to date:
    • Site-wide: 44,902
  • Since beginning of last month:
    • Site-wide: 68,494

Lying in wait: the resurgence of dengue virus after the Zika epidemic in Brazil

epidemiology more details view paper
  • Downloaded 969 times
  • Download rankings, all-time:
    • Site-wide: 41,958
    • In epidemiology: 2,186
  • Year to date:
    • Site-wide: 134,061
  • Since beginning of last month:
    • Site-wide: 101,881

Tracking Smell Loss to Identify Healthcare Workers with SARS-CoV-2 Infection

infectious diseases more details view paper
  • Downloaded 746 times
  • Download rankings, all-time:
    • Site-wide: 62,352
    • In infectious diseases: 4,223
  • Year to date:
    • Site-wide: 155,543
  • Since beginning of last month:
    • Site-wide: 67,627

Insights into the limited global spread of the immune evasive SARS-CoV-2 variant Mu

epidemiology more details view paper
  • Downloaded 564 times
  • Download rankings, all-time:
    • Site-wide: 90,822
    • In epidemiology: 3,976
  • Year to date:
    • Site-wide: 128,143
  • Since beginning of last month:
    • Site-wide: 83,160

COVID-19 Outcomes and Sequencing of SARS-CoV-2 isolated from Veterans in New England

infectious diseases more details view paper
  • Downloaded 449 times
  • Download rankings, all-time:
    • Site-wide: 116,952
    • In infectious diseases: 5,915
  • Year to date:
    • Site-wide: 126,499
  • Since beginning of last month:
    • Site-wide: 110,373

One Million and Counting: Estimates of Deaths in the United States from Ancestral SARS-CoV-2 and Variants

epidemiology more details view paper
  • Downloaded 374 times
  • Download rankings, all-time:
    • Site-wide: 137,834
    • In epidemiology: 5,810
  • Year to date:
    • Site-wide: 32,697
  • Since beginning of last month:
    • Site-wide: 95,365

A Deep Learning Approach to Forecast Short-Term COVID-19 Cases and Deaths in the US

epidemiology more details view paper
  • Downloaded 173 times
  • Download rankings, all-time:
    • Site-wide: 193,867
    • In epidemiology: 7,639
  • Year to date:
    • Site-wide: 148,420
  • Since beginning of last month:
    • Site-wide: 45,067

Interactions between seasonal temperature variation and temporal synchrony drive increased arbovirus co-infection incidence

epidemiology more details view paper
  • Downloaded 165 times
  • Download rankings, all-time:
    • Site-wide: 195,613
    • In epidemiology: 7,664
  • Year to date:
    • Site-wide: 200,283
  • Since beginning of last month:
    • Site-wide: 157,360

Routine Saliva Testing for SARS-CoV-2 in Children: Partnering with Childcare Centers in the Greater New Haven Community

infectious diseases more details view paper
  • Downloaded 146 times
  • Download rankings, all-time:
    • Site-wide: 199,310
    • In infectious diseases: 8,278
  • Year to date:
    • Site-wide: 186,362
  • Since beginning of last month:
    • Site-wide: 135,090

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