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Author: Andrew Rambaut

  • Most recently observed institution: University of Edinburgh

Rankings

  • All-time downloads: 54,412 (rank: 656 out of 381,221)
  • Categories:
    • bioinformatics: 301 (rank: 25,126 (tie) out of 32,686)
    • epidemiology: 6,510 (rank: 29 out of 9,543)
    • evolutionary biology: 16,690 (rank: 61 out of 19,531)
    • genetics: 23,534 (rank: 231 out of 35,237)
    • genomics: 3,671 (rank: 5,257 (tie) out of 40,681)
    • microbiology: 3,706 (rank: 1,881 (tie) out of 42,815)

Downloads per author, site-wide

Preprints

Accommodating individual travel history, global mobility, and unsampled diversity in phylogeography: a SARS-CoV-2 case study.

evolutionary biology more details view paper

No bioRxiv download data for this paper yet.

The emergence of SARS-CoV-2 in Europe and the US

genetics more details view paper
  • Downloaded 22,150 times
  • Download rankings, all-time:
    • Site-wide: 62 out of 88,923
    • In genetics: 4 out of 4,604
  • Year to date:
    • Site-wide: 33 out of 88,923
  • Since beginning of last month:
    • Site-wide: 23 out of 88,923

Evolutionary origins of the SARS-CoV-2 sarbecovirus lineage responsible for the COVID-19 pandemic

evolutionary biology more details view paper
  • Downloaded 12,634 times
  • Download rankings, all-time:
    • Site-wide: 161 out of 88,923
    • In evolutionary biology: 6 out of 5,441
  • Year to date:
    • Site-wide: 67 out of 88,923
  • Since beginning of last month:
    • Site-wide: 122 out of 88,923

Rapid SARS-CoV-2 whole genome sequencing for informed public health decision making in the Netherlands

genomics more details view paper
  • Downloaded 3,671 times
  • Download rankings, all-time:
    • Site-wide: 1,292 out of 88,923
    • In genomics: 275 out of 5,671
  • Year to date:
    • Site-wide: 274 out of 88,923
  • Since beginning of last month:
    • Site-wide: 242 out of 88,923

A dynamic nomenclature proposal for SARS-CoV-2 to assist genomic epidemiology

microbiology more details view paper
  • Downloaded 3,480 times
  • Download rankings, all-time:
    • Site-wide: 1,418 out of 88,923
    • In microbiology: 129 out of 7,648
  • Year to date:
    • Site-wide: 291 out of 88,923
  • Since beginning of last month:
    • Site-wide: 168 out of 88,923

Virus genomes reveal the factors that spread and sustained the West African Ebola epidemic.

epidemiology more details view paper
  • Downloaded 2,303 times
  • Download rankings, all-time:
    • Site-wide: 2,876 out of 88,923
    • In epidemiology: 22 out of 1,556
  • Year to date:
    • Site-wide: 20,101 out of 88,923
  • Since beginning of last month:
    • Site-wide: 32,228 out of 88,923

MERS-CoV recombination: implications about the reservoir and potential for adaptation

evolutionary biology more details view paper
  • Downloaded 2,295 times
  • Download rankings, all-time:
    • Site-wide: 2,896 out of 88,923
    • In evolutionary biology: 106 out of 5,441
  • Year to date:
    • Site-wide: 8,581 out of 88,923
  • Since beginning of last month:
    • Site-wide: 33,322 out of 88,923

MERS-CoV spillover at the camel-human interface

epidemiology more details view paper
  • Downloaded 1,628 times
  • Download rankings, all-time:
    • Site-wide: 5,095 out of 88,923
    • In epidemiology: 42 out of 1,556
  • Year to date:
    • Site-wide: 14,867 out of 88,923
  • Since beginning of last month:
    • Site-wide: 40,133 out of 88,923

Multiple introductions of Zika virus into the United States revealed through genomic epidemiology

epidemiology more details view paper
  • Downloaded 1,628 times
  • Download rankings, all-time:
    • Site-wide: 5,096 out of 88,923
    • In epidemiology: 41 out of 1,556
  • Year to date:
    • Site-wide: 43,356 out of 88,923
  • Since beginning of last month:
    • Site-wide: 73,322 out of 88,923

Identification of a common deletion in the spike protein of SARS-CoV-2

genetics more details view paper
  • Downloaded 1,384 times
  • Download rankings, all-time:
    • Site-wide: 6,662 out of 88,923
    • In genetics: 478 out of 4,604
  • Year to date:
    • Site-wide: 879 out of 88,923
  • Since beginning of last month:
    • Site-wide: 2,661 out of 88,923

BEAST 2.5: An Advanced Software Platform for Bayesian Evolutionary Analysis

evolutionary biology more details view paper
  • Downloaded 1,168 times
  • Download rankings, all-time:
    • Site-wide: 8,855 out of 88,923
    • In evolutionary biology: 472 out of 5,441
  • Year to date:
    • Site-wide: 30,236 out of 88,923
  • Since beginning of last month:
    • Site-wide: 27,761 out of 88,923

Phylodynamic assessment of intervention strategies for the West African Ebola virus outbreak

epidemiology more details view paper
  • Downloaded 951 times
  • Download rankings, all-time:
    • Site-wide: 12,315 out of 88,923
    • In epidemiology: 127 out of 1,556
  • Year to date:
    • Site-wide: 35,835 out of 88,923
  • Since beginning of last month:
    • Site-wide: 29,445 out of 88,923

Temporal signal and the phylodynamic threshold of SARS-CoV-2

evolutionary biology more details view paper
  • Downloaded 593 times
  • Download rankings, all-time:
    • Site-wide: 25,061 out of 88,923
    • In evolutionary biology: 1,645 out of 5,441
  • Year to date:
    • Site-wide: 3,026 out of 88,923
  • Since beginning of last month:
    • Site-wide: 2,485 out of 88,923

SANTA-SIM: Simulating Viral Sequence Evolution Dynamics Under Selection and Recombination

bioinformatics more details view paper
  • Downloaded 301 times
  • Download rankings, all-time:
    • Site-wide: 52,640 out of 88,923
    • In bioinformatics: 5,903 out of 8,406
  • Year to date:
    • Site-wide: 75,877 out of 88,923
  • Since beginning of last month:
    • Site-wide: 58,800 out of 88,923

Rapid and sensitive direct detection and identification of poliovirus from stool and environmental surveillance samples using nanopore sequencing

microbiology more details view paper
  • Downloaded 226 times
  • Download rankings, all-time:
    • Site-wide: 64,613 out of 88,923
    • In microbiology: 5,000 out of 7,648
  • Year to date:
    • Site-wide: 13,188 out of 88,923
  • Since beginning of last month:
    • Site-wide: 17,525 out of 88,923

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