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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 70,177 bioRxiv papers from 306,432 authors.

Author: Carlos D. Bustamante

Rankings

  • All-time downloads: 50,039 (rank: 301 out of 306,444)
  • Categories:
    • bioinformatics: 2,511 (rank: 3,187 (tie) out of 26,728)
    • epidemiology: 1,308 (rank: 746 (tie) out of 9,539)
    • evolutionary biology: 1,758 (rank: 1,603 (tie) out of 16,504)
    • genetics: 19,785 (rank: 334 out of 30,426)
    • genomics: 22,961 (rank: 282 out of 34,685)
    • microbiology: 1,716 (rank: 1,735 (tie) out of 31,651)

Downloads per author, site-wide

Preprints

Ancient genomes from North Africa evidence prehistoric migrations to the Maghreb from both the Levant and Europe

genetics more details view paper
  • Downloaded 8,425 times
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    • Site-wide: 180 out of 70,177
    • In genetics: 16 out of 3,895
  • Year to date:
    • Site-wide: 584 out of 70,177
  • Since beginning of last month:
    • Site-wide: 1,602 out of 70,177

Germline determinants of the somatic mutation landscape in 2,642 cancer genomes

genomics more details view paper
  • Downloaded 4,360 times
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    • Site-wide: 607 out of 70,177
    • In genomics: 156 out of 4,698
  • Year to date:
    • Site-wide: 2,634 out of 70,177
  • Since beginning of last month:
    • Site-wide: 8,361 out of 70,177

The Next Generation Precision Medical Record - A Framework for Integrating Genomes and Wearable Sensors with Medical Records

genomics more details view paper
  • Downloaded 3,743 times
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    • In genomics: 206 out of 4,698
  • Year to date:
    • Site-wide: 2,086 out of 70,177
  • Since beginning of last month:
    • Site-wide: 6,133 out of 70,177

Medical relevance of protein-truncating variants across 337,208 individuals in the UK Biobank study

genetics more details view paper
  • Downloaded 3,242 times
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    • Site-wide: 1,064 out of 70,177
    • In genetics: 92 out of 3,895
  • Year to date:
    • Site-wide: 56,816 out of 70,177
  • Since beginning of last month:
    • Site-wide: 26,735 out of 70,177

Human demographic history impacts genetic risk prediction across diverse populations

genomics more details view paper
  • Downloaded 2,831 times
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    • Site-wide: 1,379 out of 70,177
    • In genomics: 310 out of 4,698
  • Year to date:
    • Site-wide: 34,774 out of 70,177
  • Since beginning of last month:
    • Site-wide: 48,144 out of 70,177

The PAGE Study: How Genetic Diversity Improves Our Understanding of the Architecture of Complex Traits

genetics more details view paper
  • Downloaded 2,716 times
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    • Site-wide: 1,469 out of 70,177
    • In genetics: 140 out of 3,895
  • Year to date:
    • Site-wide: 13,053 out of 70,177
  • Since beginning of last month:
    • Site-wide: 8,577 out of 70,177

Bayesian model comparison for rare variant association studies of multiple phenotypes

genetics more details view paper
  • Downloaded 1,901 times
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    • In genetics: 249 out of 3,895
  • Year to date:
    • Site-wide: 22,069 out of 70,177
  • Since beginning of last month:
    • Site-wide: 10,836 out of 70,177

Structural variation detection by proximity ligation from FFPE tumor tissue

genomics more details view paper
  • Downloaded 1,774 times
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    • In genomics: 613 out of 4,698
  • Year to date:
    • Site-wide: 38,122 out of 70,177
  • Since beginning of last month:
    • Site-wide: 9,777 out of 70,177

The Time-Scale of Recombination Rate Evolution in Great Apes

evolutionary biology more details view paper
  • Downloaded 1,758 times
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    • Site-wide: 3,176 out of 70,177
    • In evolutionary biology: 145 out of 4,610
  • Year to date:
    • Site-wide: 45,685 out of 70,177
  • Since beginning of last month:
    • Site-wide: 42,856 out of 70,177

Gut microbiome transition across a lifestyle gradient in Himalaya

microbiology more details view paper
  • Downloaded 1,716 times
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    • Site-wide: 3,306 out of 70,177
    • In microbiology: 93 out of 5,690
  • Year to date:
    • Site-wide: 19,610 out of 70,177
  • Since beginning of last month:
    • Site-wide: 29,652 out of 70,177

Comparative Performance of Two Whole Genome Capture Methodologies on Ancient DNA Illumina Libraries

genomics more details view paper
  • Downloaded 1,633 times
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    • Site-wide: 3,589 out of 70,177
    • In genomics: 672 out of 4,698
  • Year to date:
    • Site-wide: 60,961 out of 70,177
  • Since beginning of last month:
    • Site-wide: 61,381 out of 70,177

Distance from Sub-Saharan Africa Predicts Mutational Load in Diverse Human Genomes

genomics more details view paper
  • Downloaded 1,568 times
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    • Site-wide: 3,855 out of 70,177
    • In genomics: 708 out of 4,698
  • Year to date:
    • Site-wide: 13,719 out of 70,177
  • Since beginning of last month:
    • Site-wide: 19,453 out of 70,177

Ancient DNA reconstructs the genetic legacies of pre-contact Puerto Rico communities

genomics more details view paper
  • Downloaded 1,397 times
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    • Site-wide: 4,713 out of 70,177
    • In genomics: 839 out of 4,698
  • Year to date:
    • Site-wide: 2,591 out of 70,177
  • Since beginning of last month:
    • Site-wide: 867 out of 70,177

An Unexpectedly Complex Architecture for Skin Pigmentation in Africans

genetics more details view paper
  • Downloaded 1,252 times
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    • Site-wide: 5,624 out of 70,177
    • In genetics: 450 out of 3,895
  • Year to date:
    • Site-wide: 57,145 out of 70,177
  • Since beginning of last month:
    • Site-wide: 13,316 out of 70,177

Genomic insights into the domestication of the chocolate tree, Theobroma cacao L.

genomics more details view paper
  • Downloaded 1,041 times
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    • Site-wide: 7,638 out of 70,177
    • In genomics: 1,217 out of 4,698
  • Year to date:
    • Site-wide: 24,746 out of 70,177
  • Since beginning of last month:
    • Site-wide: 15,197 out of 70,177

Population history and gene divergence in Native Mexicans inferred from 76 human exomes

genomics more details view paper
  • Downloaded 890 times
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    • Site-wide: 9,837 out of 70,177
    • In genomics: 1,473 out of 4,698
  • Year to date:
    • Site-wide: 3,378 out of 70,177
  • Since beginning of last month:
    • Site-wide: 11,845 out of 70,177

FasTag: automatic text classification of unstructured medical narratives

epidemiology more details view paper
  • Downloaded 849 times
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    • Site-wide: 10,621 out of 70,177
    • In epidemiology: 105 out of 1,556
  • Year to date:
    • Site-wide: 5,877 out of 70,177
  • Since beginning of last month:
    • Site-wide: 6,572 out of 70,177

Comparing multi- and single-sample variant calls to improve variant call sets from deep coverage whole-genome sequencing data

bioinformatics more details view paper
  • Downloaded 830 times
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    • Site-wide: 11,035 out of 70,177
    • In bioinformatics: 1,858 out of 6,883
  • Year to date:
    • Site-wide: None out of 70,177
  • Since beginning of last month:
    • Site-wide: 38,405 out of 70,177

Efficient analysis of large datasets and sex bias with ADMIXTURE

genomics more details view paper
  • Downloaded 788 times
  • Download rankings, all-time:
    • Site-wide: 11,938 out of 70,177
    • In genomics: 1,680 out of 4,698
  • Year to date:
    • Site-wide: 51,207 out of 70,177
  • Since beginning of last month:
    • Site-wide: 46,411 out of 70,177

Genetic architecture drives seasonal onset of hibernation in the 13-lined ground squirrel

genetics more details view paper
  • Downloaded 739 times
  • Download rankings, all-time:
    • Site-wide: 13,049 out of 70,177
    • In genetics: 904 out of 3,895
  • Year to date:
    • Site-wide: 19,430 out of 70,177
  • Since beginning of last month:
    • Site-wide: 18,089 out of 70,177

Imputation aware tag SNP selection to improve power for multi-ethnic association studies

genomics more details view paper
  • Downloaded 683 times
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    • Site-wide: 14,615 out of 70,177
    • In genomics: 1,918 out of 4,698
  • Year to date:
    • Site-wide: 46,455 out of 70,177
  • Since beginning of last month:
    • Site-wide: 60,412 out of 70,177

Population Genetic Analysis of the DARC Locus (Duffy) Reveals Adaptation from Standing Variation Associated with Malaria Resistance in Humans

genomics more details view paper
  • Downloaded 667 times
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    • Site-wide: 15,166 out of 70,177
    • In genomics: 1,961 out of 4,698
  • Year to date:
    • Site-wide: 22,906 out of 70,177
  • Since beginning of last month:
    • Site-wide: 49,596 out of 70,177

Mitogenomes illuminate the origin and migration patterns of the indigenous people of the Canary Islands

genetics more details view paper
  • Downloaded 648 times
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    • Site-wide: 15,750 out of 70,177
    • In genetics: 1,069 out of 3,895
  • Year to date:
    • Site-wide: 16,766 out of 70,177
  • Since beginning of last month:
    • Site-wide: 40,550 out of 70,177

DEVELOPING GENE-SPECIFIC META-PREDICTOR OF VARIANT PATHOGENICITY

bioinformatics more details view paper
  • Downloaded 632 times
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    • Site-wide: 16,395 out of 70,177
    • In bioinformatics: 2,527 out of 6,883
  • Year to date:
    • Site-wide: 27,706 out of 70,177
  • Since beginning of last month:
    • Site-wide: 45,713 out of 70,177

In-solution Y-chromosome capture-enrichment on ancient DNA libraries

genomics more details view paper
  • Downloaded 515 times
  • Download rankings, all-time:
    • Site-wide: 21,541 out of 70,177
    • In genomics: 2,455 out of 4,698
  • Year to date:
    • Site-wide: 16,648 out of 70,177
  • Since beginning of last month:
    • Site-wide: 59,864 out of 70,177

GBStools: A Unified Approach for Reduced Representation Sequencing and Genotyping

genomics more details view paper
  • Downloaded 509 times
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    • Site-wide: 21,884 out of 70,177
    • In genomics: 2,482 out of 4,698
  • Year to date:
    • Site-wide: 46,531 out of 70,177
  • Since beginning of last month:
    • Site-wide: 32,770 out of 70,177

Increasing the Efficiency of Genome-wide Association Mapping via Hidden Markov Models

genetics more details view paper
  • Downloaded 488 times
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    • Site-wide: 23,051 out of 70,177
    • In genetics: 1,529 out of 3,895
  • Year to date:
    • Site-wide: 43,596 out of 70,177
  • Since beginning of last month:
    • Site-wide: 66,169 out of 70,177

Data mining of digitized health records in a resource-constrained setting reveals that timely immunophenotyping is associated with improved breast cancer outcomes

epidemiology more details view paper
  • Downloaded 459 times
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    • Site-wide: 24,800 out of 70,177
    • In epidemiology: 329 out of 1,556
  • Year to date:
    • Site-wide: 43,561 out of 70,177
  • Since beginning of last month:
    • Site-wide: 49,993 out of 70,177

Multi-dimensional structure function relationships in human β-cardiac myosin from population scale genetic variation.

genomics more details view paper
  • Downloaded 457 times
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    • Site-wide: 24,973 out of 70,177
    • In genomics: 2,674 out of 4,698
  • Year to date:
    • Site-wide: 32,046 out of 70,177
  • Since beginning of last month:
    • Site-wide: 51,262 out of 70,177

Caring without sharing: Meta-analysis 2.0 for massive genome-wide association studies

bioinformatics more details view paper
  • Downloaded 402 times
  • Download rankings, all-time:
    • Site-wide: 28,784 out of 70,177
    • In bioinformatics: 3,803 out of 6,883
  • Year to date:
    • Site-wide: 35,643 out of 70,177
  • Since beginning of last month:
    • Site-wide: 22,815 out of 70,177

Standardized biogeographic grouping system for annotating populations in pharmacogenetic research

genetics more details view paper
  • Downloaded 374 times
  • Download rankings, all-time:
    • Site-wide: 31,150 out of 70,177
    • In genetics: 1,971 out of 3,895
  • Year to date:
    • Site-wide: 36,295 out of 70,177
  • Since beginning of last month:
    • Site-wide: 31,959 out of 70,177

Network Enhancement: a general method to denoise weighted biological networks

bioinformatics more details view paper
  • Downloaded 355 times
  • Download rankings, all-time:
    • Site-wide: 32,905 out of 70,177
    • In bioinformatics: 4,161 out of 6,883
  • Year to date:
    • Site-wide: 42,761 out of 70,177
  • Since beginning of last month:
    • Site-wide: 59,065 out of 70,177

SNAPPY: Single Nucleotide Assignment of Phylogenetic Parameters on the Y chromosome

bioinformatics more details view paper
  • Downloaded 292 times
  • Download rankings, all-time:
    • Site-wide: 39,269 out of 70,177
    • In bioinformatics: 4,732 out of 6,883
  • Year to date:
    • Site-wide: 14,930 out of 70,177
  • Since beginning of last month:
    • Site-wide: 28,712 out of 70,177

Development and clinical validation of a targeted RNAseq panel (Fusion-STAMP) for diagnostic and predictive gene fusion detection in solid tumors

genomics more details view paper
  • Downloaded 105 times
  • Download rankings, all-time:
    • Site-wide: 64,715 out of 70,177
    • In genomics: 4,550 out of 4,698
  • Year to date:
    • Site-wide: 46,546 out of 70,177
  • Since beginning of last month:
    • Site-wide: 2,263 out of 70,177

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