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Author: Jan Albert

Rankings

  • All-time downloads: 162,499 (rank: 937 )
  • Categories:
    • allergy and immunology: 3,893 (rank: 706 )
    • bioinformatics: 2,150 (rank: 10,641 (tie) )
    • epidemiology: 21,942 (rank: 1,126 )
    • evolutionary biology: 1,230 (rank: 8,719 (tie) )
    • genomics: 1,440 (rank: 23,010 (tie) )
    • hiv aids: 392 (rank: 1,162 (tie) )
    • immunology: 109,547 (rank: 67 )
    • infectious diseases: 18,866 (rank: 4,384 )
    • microbiology: 2,515 (rank: 9,578 (tie) )

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Preprints

Robust T cell immunity in convalescent individuals with asymptomatic or mild COVID-19

immunology more details view paper
  • Downloaded 94,602 times
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    • Site-wide: 88
    • In immunology: 2
  • Year to date:
    • Site-wide: 5,554
  • Since beginning of last month:
    • Site-wide: 3,020

Impact of seasonal forcing on a potential SARS-CoV-2 pandemic

epidemiology more details view paper
  • Downloaded 18,293 times
  • Download rankings, all-time:
    • Site-wide: 635
    • In epidemiology: 100
  • Year to date:
    • Site-wide: 4,338
  • Since beginning of last month:
    • Site-wide: 4,978

Massive and rapid COVID-19 testing is feasible by extraction-free SARS-CoV-2 RT-qPCR

infectious diseases more details view paper
  • Downloaded 14,179 times
  • Download rankings, all-time:
    • Site-wide: 883
    • In infectious diseases: 300
  • Year to date:
    • Site-wide: 14,542
  • Since beginning of last month:
    • Site-wide: 16,051

Omicron sublineage BA.2.75.2 exhibits extensive escape from neutralising antibodies

immunology more details view paper
  • Downloaded 9,383 times
  • Download rankings, all-time:
    • Site-wide: 1,479
    • In immunology: 61
  • Year to date:
    • Site-wide: 2,885
  • Since beginning of last month:
    • Site-wide: 1,078

Structural basis of Omicron neutralization by affinity-matured public antibodies

immunology more details view paper
  • Downloaded 2,569 times
  • Download rankings, all-time:
    • Site-wide: 9,176
    • In immunology: 359
  • Year to date:
    • Site-wide: 6,883
  • Since beginning of last month:
    • Site-wide: 14,707

Evasion of neutralizing antibodies by Omicron sublineage BA.2.75

immunology more details view paper
  • Downloaded 2,115 times
  • Download rankings, all-time:
    • Site-wide: 12,339
    • In immunology: 474
  • Year to date:
    • Site-wide: 30,920
  • Since beginning of last month:
    • Site-wide: 22,261

Probability-based approaches for identifying low-titer antibody responses against SARS-CoV-2

allergy and immunology more details view paper
  • Downloaded 2,084 times
  • Download rankings, all-time:
    • Site-wide: 12,627
    • In allergy and immunology: 63
  • Year to date:
    • Site-wide: 47,847
  • Since beginning of last month:
    • Site-wide: 52,954

Airway antibodies emerge according to COVID-19 severity and wane rapidly but reappear after SARS-CoV-2 vaccination

infectious diseases more details view paper
  • Downloaded 1,948 times
  • Download rankings, all-time:
    • Site-wide: 13,985
    • In infectious diseases: 1,917
  • Year to date:
    • Site-wide: 44,748
  • Since beginning of last month:
    • Site-wide: 33,380

COVID-19 Scenarios: an interactive tool to explore the spread and associated morbidity and mortality of SARS-CoV-2

epidemiology more details view paper
  • Downloaded 1,947 times
  • Download rankings, all-time:
    • Site-wide: 13,994
    • In epidemiology: 1,005
  • Year to date:
    • Site-wide: 124,801
  • Since beginning of last month:
    • Site-wide: 39,061

Seropositivity in blood donors and pregnant women during the first year of SARS-CoV-2 transmission in Stockholm, Sweden

allergy and immunology more details view paper
  • Downloaded 1,552 times
  • Download rankings, all-time:
    • Site-wide: 19,944
    • In allergy and immunology: 85
  • Year to date:
    • Site-wide: 87,624
  • Since beginning of last month:
    • Site-wide: 44,080

Interactions between seasonal human coronaviruses and implications for the SARS-CoV-2 pandemic: A retrospective study in Stockholm, Sweden, 2009-2020

infectious diseases more details view paper
  • Downloaded 1,534 times
  • Download rankings, all-time:
    • Site-wide: 20,306
    • In infectious diseases: 2,321
  • Year to date:
    • Site-wide: 157,609
  • Since beginning of last month:
    • Site-wide: 110,050

Error rates, PCR recombination, and sampling depth in HIV-1 Whole Genome Deep Sequencing

genomics more details view paper
  • Downloaded 1,450 times
  • Download rankings, all-time:
    • Site-wide: 22,223
    • In genomics: 1,935
  • Year to date:
    • Site-wide: 49,764
  • Since beginning of last month:
    • Site-wide: 116,991

Easy and Accurate Reconstruction of Whole HIV Genomes from Short-Read Sequence Data

bioinformatics more details view paper
  • Downloaded 1,272 times
  • Download rankings, all-time:
    • Site-wide: 27,438
    • In bioinformatics: 2,953
  • Year to date:
    • Site-wide: 131,940
  • Since beginning of last month:
    • Site-wide: 174,226

Variable loss of antibody potency against SARS-CoV-2 B.1.1.529 (Omicron)

immunology more details view paper
  • Downloaded 1,136 times
  • Download rankings, all-time:
    • Site-wide: 32,784
    • In immunology: 1,186
  • Year to date:
    • Site-wide: 21,972
  • Since beginning of last month:
    • Site-wide: 37,499

In-vivo mutation rates and fitness landscape of HIV-1

evolutionary biology more details view paper
  • Downloaded 974 times
  • Download rankings, all-time:
    • Site-wide: 41,553
    • In evolutionary biology: 1,623
  • Year to date:
    • Site-wide: 93,503
  • Since beginning of last month:
    • Site-wide: 203,345

Functional myeloid-derived suppressor cells expand in blood but not airways of COVID-19 patients and predict disease severity

infectious diseases more details view paper
  • Downloaded 972 times
  • Download rankings, all-time:
    • Site-wide: 41,684
    • In infectious diseases: 3,442
  • Year to date:
    • Site-wide: 66,027
  • Since beginning of last month:
    • Site-wide: 94,639

SARS-CoV-2 genome sequences from late April in Stockholm, Sweden reveal a novel mutation in the spike protein

bioinformatics more details view paper
  • Downloaded 888 times
  • Download rankings, all-time:
    • Site-wide: 47,922
    • In bioinformatics: 4,859
  • Year to date:
    • Site-wide: None
  • Since beginning of last month:
    • Site-wide: 131,220

Intra- and interpatient evolution of enterovirus D68 analyzed by whole-genome deep sequencing

microbiology more details view paper
  • Downloaded 865 times
  • Download rankings, all-time:
    • Site-wide: 49,878
    • In microbiology: 2,959
  • Year to date:
    • Site-wide: None
  • Since beginning of last month:
    • Site-wide: 89,883

Evolution, geographic spreading, and demographic distribution of Enterovirus D68

microbiology more details view paper
  • Downloaded 848 times
  • Download rankings, all-time:
    • Site-wide: 51,452
    • In microbiology: 2,992
  • Year to date:
    • Site-wide: None
  • Since beginning of last month:
    • Site-wide: 121,078

Establishment and stability of the latent HIV-1 DNA reservoir

microbiology more details view paper
  • Downloaded 813 times
  • Download rankings, all-time:
    • Site-wide: 54,751
    • In microbiology: 3,211
  • Year to date:
    • Site-wide: 191,519
  • Since beginning of last month:
    • Site-wide: 199,226

Inference of transmission network structure from HIV phylogenetic trees

epidemiology more details view paper
  • Downloaded 792 times
  • Download rankings, all-time:
    • Site-wide: 56,942
    • In epidemiology: 2,751
  • Year to date:
    • Site-wide: 136,927
  • Since beginning of last month:
    • Site-wide: 207,371

Estimating Time Of HIV-1 Infection From Next-Generation Sequence Diversity

epidemiology more details view paper
  • Downloaded 709 times
  • Download rankings, all-time:
    • Site-wide: 67,020
    • In epidemiology: 3,122
  • Year to date:
    • Site-wide: 97,038
  • Since beginning of last month:
    • Site-wide: 196,137

Delayed generation of functional virus-specific circulating T follicular helper cells correlates with severe COVID-19

infectious diseases more details view paper
  • Downloaded 304 times
  • Download rankings, all-time:
    • Site-wide: 158,817
    • In infectious diseases: 7,240
  • Year to date:
    • Site-wide: 21,069
  • Since beginning of last month:
    • Site-wide: 42,422

Human influenza virus infection elicits distinct patterns of monocyte and dendritic cell mobilization in blood and the nasopharynx

allergy and immunology more details view paper
  • Downloaded 300 times
  • Download rankings, all-time:
    • Site-wide: 159,821
    • In allergy and immunology: 314
  • Year to date:
    • Site-wide: 16,611
  • Since beginning of last month:
    • Site-wide: 35,121

Getting more from heterogeneous HIV-1 surveillance data in a high immigration country: estimation of incidence and undiagnosed population size using multiple biomarkers

epidemiology more details view paper
  • Downloaded 288 times
  • Download rankings, all-time:
    • Site-wide: 163,780
    • In epidemiology: 6,575
  • Year to date:
    • Site-wide: 188,691
  • Since beginning of last month:
    • Site-wide: 207,769

Combining biomarker and virus phylogenetic models improves epidemiological source identification

evolutionary biology more details view paper
  • Downloaded 265 times
  • Download rankings, all-time:
    • Site-wide: 170,378
    • In evolutionary biology: 7,664
  • Year to date:
    • Site-wide: 103,503
  • Since beginning of last month:
    • Site-wide: 210,791

Inferring the multiplicity of founder variants initiating HIV-1 infection: a systematic review and individual patient data meta-analysis

hiv aids more details view paper
  • Downloaded 217 times
  • Download rankings, all-time:
    • Site-wide: 183,368
    • In hiv aids: 220
  • Year to date:
    • Site-wide: 33,544
  • Since beginning of last month:
    • Site-wide: 37,460

HIV-phyloTSI: Subtype-independent estimation of time since HIV-1 infection for cross-sectional measures of population incidence using deep sequence data

hiv aids more details view paper
  • Downloaded 200 times
  • Download rankings, all-time:
    • Site-wide: 187,493
    • In hiv aids: 235
  • Year to date:
    • Site-wide: 35,063
  • Since beginning of last month:
    • Site-wide: 28,693

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